RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 RBM10P98175 930 aaKnown RBP16.91■□□□□ 0.3
PTPRE-204ENST00000455661 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
PTPRE-204ENST00000455661 TULP4Q9NRJ4 1543 aa16.9■□□□□ 0.3
PTPRE-204ENST00000455661 PDLIM2Q96JY6 352 aa16.9■□□□□ 0.3
PTPRE-204ENST00000455661 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
PTPRE-204ENST00000455661 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
PTPRE-204ENST00000455661 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.29
PTPRE-204ENST00000455661 MCM5P33992 734 aa16.89■□□□□ 0.29
PTPRE-204ENST00000455661 MRPL50Q8N5N7 158 aaKnown RBP16.89■□□□□ 0.29
PTPRE-204ENST00000455661 FAM13BQ9NYF5 915 aa16.89■□□□□ 0.29
PTPRE-204ENST00000455661 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
PTPRE-204ENST00000455661 PIK3R4Q99570 1358 aa16.89■□□□□ 0.29
PTPRE-204ENST00000455661 FCHSD2O94868 740 aa16.88■□□□□ 0.29
PTPRE-204ENST00000455661 MTERF4Q7Z6M4 381 aaKnown RBP16.88■□□□□ 0.29
PTPRE-204ENST00000455661 ST18O60284 1047 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 GLI2P10070 1586 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
PTPRE-204ENST00000455661 PTCH1Q13635 1447 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 AK9Q5TCS8 1911 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 VAMP4O75379 141 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 PRPF40AO75400 957 aaKnown RBP16.87■□□□□ 0.29
PTPRE-204ENST00000455661 INTS3Q68E01 1043 aaKnown RBP16.87■□□□□ 0.29
PTPRE-204ENST00000455661 SIRT2Q8IXJ6 389 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 ZKSCAN5Q9Y2L8 839 aa16.87■□□□□ 0.29
PTPRE-204ENST00000455661 UQCRHLA0A096LP55 91 aa16.86■□□□□ 0.29
PTPRE-204ENST00000455661 UQCRHP07919 91 aa16.86■□□□□ 0.29
PTPRE-204ENST00000455661 GSPT1P15170 499 aaKnown RBP16.86■□□□□ 0.29
PTPRE-204ENST00000455661 SRPK2P78362 688 aaKnown RBP16.86■□□□□ 0.29
PTPRE-204ENST00000455661 CASC1Q6TDU7 716 aa16.86■□□□□ 0.29
PTPRE-204ENST00000455661 USP26Q9BXU7 913 aa16.86■□□□□ 0.29
PTPRE-204ENST00000455661 CCDC39Q9UFE4 941 aa16.86■□□□□ 0.29
PTPRE-204ENST00000455661 XPCQ01831 940 aaPredicted RBP16.86■□□□□ 0.29
PTPRE-204ENST00000455661 PLEKHM2Q8IWE5 1019 aa16.86■□□□□ 0.29
PTPRE-204ENST00000455661 FYB1O15117 783 aa16.85■□□□□ 0.29
PTPRE-204ENST00000455661 ABCC4O15439 1325 aa16.85■□□□□ 0.29
PTPRE-204ENST00000455661 VGFO15240 615 aaPredicted RBP16.85■□□□□ 0.29
PTPRE-204ENST00000455661 TTC22Q5TAA0 569 aa16.85■□□□□ 0.29
PTPRE-204ENST00000455661 LRSAM1Q6UWE0 723 aa16.85■□□□□ 0.29
PTPRE-204ENST00000455661 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.85■□□□□ 0.29
PTPRE-204ENST00000455661 ARHGEF28Q8N1W1 1705 aaKnown RBP16.85■□□□□ 0.29
PTPRE-204ENST00000455661 ABCA9Q8IUA7 1624 aa16.85■□□□□ 0.29
PTPRE-204ENST00000455661 DYNC1I1O14576 645 aa16.84■□□□□ 0.29
PTPRE-204ENST00000455661 API5Q9BZZ5 524 aaKnown RBP16.84■□□□□ 0.29
PTPRE-204ENST00000455661 GNAI1P63096 354 aa16.84■□□□□ 0.29
PTPRE-204ENST00000455661 SAFB2Q14151 953 aaKnown RBP eCLIP16.84■□□□□ 0.29
PTPRE-204ENST00000455661 PNPLA6Q8IY17 1366 aa16.83■□□□□ 0.29
PTPRE-204ENST00000455661 PRKAR2BP31323 418 aa16.83■□□□□ 0.28
PTPRE-204ENST00000455661 ANKRD26Q9UPS8 1709 aa16.83■□□□□ 0.28
PTPRE-204ENST00000455661 PKP1Q13835 747 aa16.82■□□□□ 0.28
PTPRE-204ENST00000455661 GPT2Q8TD30 523 aa16.82■□□□□ 0.28
PTPRE-204ENST00000455661 DCTPP1Q9H773 170 aa16.82■□□□□ 0.28
PTPRE-204ENST00000455661 RBM27Q9P2N5 1060 aaKnown RBP16.82■□□□□ 0.28
PTPRE-204ENST00000455661 ATAD2Q6PL18 1390 aa16.82■□□□□ 0.28
PTPRE-204ENST00000455661 NPATQ14207 1427 aa16.82■□□□□ 0.28
PTPRE-204ENST00000455661 SASS6Q6UVJ0 657 aa16.81■□□□□ 0.28
PTPRE-204ENST00000455661 MBD3O95983 291 aa16.81■□□□□ 0.28
PTPRE-204ENST00000455661 NFE2L2Q16236 605 aa16.81■□□□□ 0.28
PTPRE-204ENST00000455661 IFT57Q9NWB7 429 aa16.81■□□□□ 0.28
PTPRE-204ENST00000455661 ZFYVE9O95405 1425 aa16.81■□□□□ 0.28
PTPRE-204ENST00000455661 HDGFL2Q7Z4V5 671 aaPredicted RBP16.8■□□□□ 0.28
PTPRE-204ENST00000455661 KIF24Q5T7B8 1368 aa16.8■□□□□ 0.28
PTPRE-204ENST00000455661 REC8O95072 547 aa16.8■□□□□ 0.28
PTPRE-204ENST00000455661 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
PTPRE-204ENST00000455661 FAM135BQ49AJ0 1406 aa16.8■□□□□ 0.28
PTPRE-204ENST00000455661 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
PTPRE-204ENST00000455661 SYCE3A1L190 88 aa16.79■□□□□ 0.28
PTPRE-204ENST00000455661 ELL2O00472 640 aaPredicted RBP16.79■□□□□ 0.28
PTPRE-204ENST00000455661 ZGPATQ8N5A5 531 aaKnown RBP16.79■□□□□ 0.28
PTPRE-204ENST00000455661 CFAP65Q6ZU64 1925 aaKnown RBP16.79■□□□□ 0.28
PTPRE-204ENST00000455661 TWISTNBQ3B726 338 aaPredicted RBP16.79■□□□□ 0.28
PTPRE-204ENST00000455661 NUTM2DQ5VT03 806 aaPredicted RBP16.79■□□□□ 0.28
PTPRE-204ENST00000455661 TMEM63CQ9P1W3 806 aa16.79■□□□□ 0.28
PTPRE-204ENST00000455661 CDC42BPGQ6DT37 1551 aa16.78■□□□□ 0.28
PTPRE-204ENST00000455661 PTMAP06454 111 aaKnown RBP16.78■□□□□ 0.28
PTPRE-204ENST00000455661 ZDHHC9Q9Y397 364 aa16.78■□□□□ 0.28
PTPRE-204ENST00000455661 MBIPQ9NS73 344 aa16.77■□□□□ 0.28
PTPRE-204ENST00000455661 STK26Q9P289 416 aa16.77■□□□□ 0.28
PTPRE-204ENST00000455661 KIDINS220Q9ULH0 1771 aa16.77■□□□□ 0.27
PTPRE-204ENST00000455661 CAMSAP1Q5T5Y3 1602 aa16.77■□□□□ 0.27
PTPRE-204ENST00000455661 GGT6Q6P531 493 aa16.76■□□□□ 0.27
PTPRE-204ENST00000455661 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
PTPRE-204ENST00000455661 THUMPD2Q9BTF0 503 aaKnown RBP16.76■□□□□ 0.27
PTPRE-204ENST00000455661 SDSP20132 328 aa16.76■□□□□ 0.27
PTPRE-204ENST00000455661 SMAP1Q8IYB5 467 aaPredicted RBP16.76■□□□□ 0.27
PTPRE-204ENST00000455661 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
PTPRE-204ENST00000455661 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
PTPRE-204ENST00000455661 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
PTPRE-204ENST00000455661 ADRA2BP18089 450 aa16.75■□□□□ 0.27
PTPRE-204ENST00000455661 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
PTPRE-204ENST00000455661 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
PTPRE-204ENST00000455661 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
PTPRE-204ENST00000455661 ANKRD44Q8N8A2 993 aa16.75■□□□□ 0.27
PTPRE-204ENST00000455661 ERC2O15083 957 aa16.74■□□□□ 0.27
PTPRE-204ENST00000455661 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
PTPRE-204ENST00000455661 TSPY26PQ9H489 355 aa16.74■□□□□ 0.27
PTPRE-204ENST00000455661 HMOX1P09601 288 aa16.74■□□□□ 0.27
PTPRE-204ENST00000455661 MCM2P49736 904 aa16.73■□□□□ 0.27
PTPRE-204ENST00000455661 RNF214Q8ND24 703 aa16.73■□□□□ 0.27
PTPRE-204ENST00000455661 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms