RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 CARD14Q9BXL6 1004 aa34.57■■■■□ 3.12
MSH2-203ENST00000454849 COL18A1P39060 1754 aa34.57■■■■□ 3.12
MSH2-203ENST00000454849 COG3Q96JB2 828 aa34.56■■■■□ 3.12
MSH2-203ENST00000454849 GGNBP2Q9H3C7 697 aa34.56■■■■□ 3.12
MSH2-203ENST00000454849 TOM1L2Q6ZVM7 507 aa34.55■■■■□ 3.12
MSH2-203ENST00000454849 TCP11L2Q8N4U5 519 aa34.55■■■■□ 3.12
MSH2-203ENST00000454849 CSB-PGBD3P0DP91 1061 aa34.54■■■■□ 3.12
MSH2-203ENST00000454849 OVOS2A0A0J9YW53 1432 aa34.54■■■■□ 3.12
MSH2-203ENST00000454849 OVOS2Q6IE36 1432 aa34.54■■■■□ 3.12
MSH2-203ENST00000454849 FYB1O15117 783 aa34.53■■■■□ 3.12
MSH2-203ENST00000454849 C11orf95C9JLR9 678 aaPredicted RBP34.52■■■■□ 3.12
MSH2-203ENST00000454849 EP400Q96L91 3159 aa34.52■■■■□ 3.12
MSH2-203ENST00000454849 RGPD5Q99666 1765 aa34.51■■■■□ 3.11
MSH2-203ENST00000454849 MYOM1P52179 1685 aa34.5■■■■□ 3.11
MSH2-203ENST00000454849 CRB1P82279 1406 aa34.5■■■■□ 3.11
MSH2-203ENST00000454849 BARGINQ6ZT62 677 aa34.5■■■■□ 3.11
MSH2-203ENST00000454849 USP54Q70EL1 1684 aa34.49■■■■□ 3.11
MSH2-203ENST00000454849 WDR17Q8IZU2 1322 aa34.49■■■■□ 3.11
MSH2-203ENST00000454849 THSD7AQ9UPZ6 1657 aa34.48■■■■□ 3.11
MSH2-203ENST00000454849 NSD3Q9BZ95 1437 aa34.47■■■■□ 3.11
MSH2-203ENST00000454849 THRAP3Q9Y2W1 955 aaKnown RBP34.44■■■■□ 3.1
MSH2-203ENST00000454849 LTN1O94822 1766 aa34.42■■■■□ 3.1
MSH2-203ENST00000454849 LTV1Q96GA3 475 aaPredicted RBP34.42■■■■□ 3.1
MSH2-203ENST00000454849 MAP3K19Q56UN5 1328 aa34.41■■■■□ 3.1
MSH2-203ENST00000454849 PDE3BQ13370 1112 aa34.41■■■■□ 3.1
MSH2-203ENST00000454849 RRS1Q15050 365 aaKnown RBP34.41■■■■□ 3.1
MSH2-203ENST00000454849 ANKRD24Q8TF21 1146 aa34.4■■■■□ 3.1
MSH2-203ENST00000454849 NLRP2Q9NX02 1062 aa34.4■■■■□ 3.1
MSH2-203ENST00000454849 CARD10Q9BWT7 1032 aa34.39■■■■□ 3.1
MSH2-203ENST00000454849 AMPHP49418 695 aa34.38■■■■□ 3.09
MSH2-203ENST00000454849 DEFB132Q7Z7B7 95 aa34.38■■■■□ 3.09
MSH2-203ENST00000454849 CCDC125Q86Z20 511 aa34.38■■■■□ 3.09
MSH2-203ENST00000454849 IP6K1Q92551 441 aa34.38■■■■□ 3.09
MSH2-203ENST00000454849 PANK3Q9H999 370 aa34.38■■■■□ 3.09
MSH2-203ENST00000454849 BLMP54132 1417 aaPredicted RBP34.37■■■■□ 3.09
MSH2-203ENST00000454849 ERBB3P21860 1342 aa34.35■■■■□ 3.09
MSH2-203ENST00000454849 SF3B2Q13435 895 aaKnown RBP34.35■■■■□ 3.09
MSH2-203ENST00000454849 HOXC9P31274 260 aa34.33■■■■□ 3.09
MSH2-203ENST00000454849 KIF20BQ96Q89 1820 aa34.32■■■■□ 3.09
MSH2-203ENST00000454849 ABCC6O95255 1503 aa34.32■■■■□ 3.08
MSH2-203ENST00000454849 CGNL1Q0VF96 1302 aa34.3■■■■□ 3.08
MSH2-203ENST00000454849 KIF7Q2M1P5 1343 aa34.3■■■■□ 3.08
MSH2-203ENST00000454849 TRIM37O94972 964 aa34.3■■■■□ 3.08
MSH2-203ENST00000454849 DDB1Q16531 1140 aa34.3■■■■□ 3.08
MSH2-203ENST00000454849 FAM196AQ6ZSG2 479 aa34.3■■■■□ 3.08
MSH2-203ENST00000454849 TNNT2P45379 298 aaPredicted RBP34.26■■■■□ 3.08
MSH2-203ENST00000454849 CCDC7Q96M83 1385 aa34.25■■■■□ 3.07
MSH2-203ENST00000454849 PARP4Q9UKK3 1724 aaKnown RBP34.24■■■■□ 3.07
MSH2-203ENST00000454849 EMILIN1Q9Y6C2 1016 aa34.24■■■■□ 3.07
MSH2-203ENST00000454849 PPM1GO15355 546 aaPredicted RBP34.23■■■■□ 3.07
MSH2-203ENST00000454849 CDCA7Q9BWT1 371 aaPredicted RBP34.23■■■■□ 3.07
MSH2-203ENST00000454849 DISP2A7MBM2 1401 aa34.22■■■■□ 3.07
MSH2-203ENST00000454849 HSP90AB2PQ58FF8 381 aa34.22■■■■□ 3.07
MSH2-203ENST00000454849 MARCH10Q8NA82 808 aaPredicted RBP34.22■■■■□ 3.07
MSH2-203ENST00000454849 LRRC37A3O60309 1634 aa34.22■■■■□ 3.07
MSH2-203ENST00000454849 EXOC5O00471 708 aa34.21■■■■□ 3.07
MSH2-203ENST00000454849 EN1Q05925 392 aaPredicted RBP34.21■■■■□ 3.07
MSH2-203ENST00000454849 BAG6P46379 1132 aa34.19■■■■□ 3.06
MSH2-203ENST00000454849 IL2RBP14784 551 aa34.18■■■■□ 3.06
MSH2-203ENST00000454849 WNK3Q9BYP7 1800 aa34.18■■■■□ 3.06
MSH2-203ENST00000454849 USHBP1Q8N6Y0 703 aa34.17■■■■□ 3.06
MSH2-203ENST00000454849 RTL1A6NKG5 1358 aa34.16■■■■□ 3.06
MSH2-203ENST00000454849 APBA3O96018 575 aa34.16■■■■□ 3.06
MSH2-203ENST00000454849 PEAK1Q9H792 1746 aa34.16■■■■□ 3.06
MSH2-203ENST00000454849 NBPF6Q5VWK0 638 aa34.14■■■■□ 3.06
MSH2-203ENST00000454849 PTF1AQ7RTS3 328 aa34.14■■■■□ 3.06
MSH2-203ENST00000454849 NBPF4Q96M43 638 aa34.14■■■■□ 3.06
MSH2-203ENST00000454849 KNSTRNQ9Y448 316 aa34.14■■■■□ 3.06
MSH2-203ENST00000454849 OVOS2A0A0G2JMS6 1433 aa34.13■■■■□ 3.05
MSH2-203ENST00000454849 FLT4P35916 1363 aa34.12■■■■□ 3.05
MSH2-203ENST00000454849 RGPD1P0DJD0 1748 aa34.12■■■■□ 3.05
MSH2-203ENST00000454849 RGPD2P0DJD1 1756 aa34.11■■■■□ 3.05
MSH2-203ENST00000454849 WASHC2AQ641Q2 1341 aa34.11■■■■□ 3.05
MSH2-203ENST00000454849 POLKQ9UBT6 870 aa34.11■■■■□ 3.05
MSH2-203ENST00000454849 INSRP06213 1382 aa34.11■■■■□ 3.05
MSH2-203ENST00000454849 EZH2Q15910 746 aaKnown RBP34.1■■■■□ 3.05
MSH2-203ENST00000454849 MORC1Q86VD1 984 aa34.09■■■■□ 3.05
MSH2-203ENST00000454849 TNS1Q9HBL0 1735 aaKnown RBP34.09■■■■□ 3.05
MSH2-203ENST00000454849 CNGB1Q14028 1251 aaPredicted RBP34.08■■■■□ 3.05
MSH2-203ENST00000454849 TNS2Q63HR2 1409 aa34.07■■■■□ 3.04
MSH2-203ENST00000454849 DDX54Q8TDD1 881 aaKnown RBP34.06■■■■□ 3.04
MSH2-203ENST00000454849 SMG6Q86US8 1419 aaKnown RBP34.05■■■■□ 3.04
MSH2-203ENST00000454849 ACSBG1Q96GR2 724 aa34.04■■■■□ 3.04
MSH2-203ENST00000454849 CAMKK2Q96RR4 588 aa34.04■■■■□ 3.04
MSH2-203ENST00000454849 MAP2P11137 1827 aaKnown RBP34.04■■■■□ 3.04
MSH2-203ENST00000454849 AMER1Q5JTC6 1135 aaPredicted RBP34.03■■■■□ 3.04
MSH2-203ENST00000454849 FAM208AQ9UK61 1670 aaKnown RBP34.03■■■■□ 3.04
MSH2-203ENST00000454849 KIF24Q5T7B8 1368 aa34.02■■■■□ 3.04
MSH2-203ENST00000454849 ANKRD26Q9UPS8 1709 aa34.01■■■■□ 3.04
MSH2-203ENST00000454849 KCNQ2O43526 872 aa34.01■■■■□ 3.03
MSH2-203ENST00000454849 NSD2O96028 1365 aa34■■■■□ 3.03
MSH2-203ENST00000454849 MEGF6O75095 1541 aa33.99■■■■□ 3.03
MSH2-203ENST00000454849 PER1O15534 1290 aaPredicted RBP33.99■■■■□ 3.03
MSH2-203ENST00000454849 CC2D1BQ5T0F9 858 aaKnown RBP33.99■■■■□ 3.03
MSH2-203ENST00000454849 BCL11BQ9C0K0 894 aaPredicted RBP33.99■■■■□ 3.03
MSH2-203ENST00000454849 PSDA5PKW4 1024 aaPredicted RBP33.97■■■■□ 3.03
MSH2-203ENST00000454849 RAPGEF4Q8WZA2 1011 aa33.97■■■■□ 3.03
MSH2-203ENST00000454849 SBF2Q86WG5 1849 aa33.96■■■■□ 3.03
MSH2-203ENST00000454849 ZCRB1Q8TBF4 217 aaKnown RBP33.96■■■■□ 3.03
MSH2-203ENST00000454849 EIF4A2Q14240 407 aaKnown RBP33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms