RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 SOX12O15370 315 aa16.74■□□□□ 0.27
GARNL3-210ENST00000453030 LTN1O94822 1766 aa16.74■□□□□ 0.27
GARNL3-210ENST00000453030 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
GARNL3-210ENST00000453030 NFAT5O94916 1531 aa16.73■□□□□ 0.27
GARNL3-210ENST00000453030 TTC21BQ7Z4L5 1316 aa16.72■□□□□ 0.27
GARNL3-210ENST00000453030 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
GARNL3-210ENST00000453030 WDR17Q8IZU2 1322 aa16.7■□□□□ 0.26
GARNL3-210ENST00000453030 KTN1Q86UP2 1357 aaKnown RBP16.7■□□□□ 0.26
GARNL3-210ENST00000453030 DDB1Q16531 1140 aa16.7■□□□□ 0.26
GARNL3-210ENST00000453030 AXIN2Q9Y2T1 843 aa16.7■□□□□ 0.26
GARNL3-210ENST00000453030 TTC21AQ8NDW8 1320 aa16.69■□□□□ 0.26
GARNL3-210ENST00000453030 CSB-PGBD3P0DP91 1061 aa16.68■□□□□ 0.26
GARNL3-210ENST00000453030 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
GARNL3-210ENST00000453030 ARHGEF25Q86VW2 580 aa16.68■□□□□ 0.26
GARNL3-210ENST00000453030 KCNH5Q8NCM2 988 aa16.68■□□□□ 0.26
GARNL3-210ENST00000453030 ZNF692Q9BU19 519 aaPredicted RBP16.68■□□□□ 0.26
GARNL3-210ENST00000453030 ABCC6O95255 1503 aa16.68■□□□□ 0.26
GARNL3-210ENST00000453030 KAT6BQ8WYB5 2073 aa16.67■□□□□ 0.26
GARNL3-210ENST00000453030 CASZ1Q86V15 1759 aa16.66■□□□□ 0.26
GARNL3-210ENST00000453030 C11orf95C9JLR9 678 aaPredicted RBP16.66■□□□□ 0.26
GARNL3-210ENST00000453030 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
GARNL3-210ENST00000453030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.65■□□□□ 0.26
GARNL3-210ENST00000453030 CD163L1Q9NR16 1453 aa16.65■□□□□ 0.26
GARNL3-210ENST00000453030 TNS2Q63HR2 1409 aa16.64■□□□□ 0.25
GARNL3-210ENST00000453030 PTF1AQ7RTS3 328 aa16.64■□□□□ 0.25
GARNL3-210ENST00000453030 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
GARNL3-210ENST00000453030 NHSQ6T4R5 1651 aa16.64■□□□□ 0.25
GARNL3-210ENST00000453030 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
GARNL3-210ENST00000453030 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
GARNL3-210ENST00000453030 ANO8Q9HCE9 1232 aaPredicted RBP16.63■□□□□ 0.25
GARNL3-210ENST00000453030 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
GARNL3-210ENST00000453030 CCDC7Q96M83 1385 aa16.62■□□□□ 0.25
GARNL3-210ENST00000453030 NME9Q86XW9 330 aa16.61■□□□□ 0.25
GARNL3-210ENST00000453030 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
GARNL3-210ENST00000453030 BCL11BQ9C0K0 894 aaPredicted RBP16.61■□□□□ 0.25
GARNL3-210ENST00000453030 BTAF1O14981 1849 aa16.61■□□□□ 0.25
GARNL3-210ENST00000453030 BCL9O00512 1426 aa16.61■□□□□ 0.25
GARNL3-210ENST00000453030 PLSCR1O15162 318 aa16.6■□□□□ 0.25
GARNL3-210ENST00000453030 SPON1Q9HCB6 807 aa16.6■□□□□ 0.25
GARNL3-210ENST00000453030 PPP1R1BQ9UD71 204 aaPredicted RBP16.6■□□□□ 0.25
GARNL3-210ENST00000453030 USP31Q70CQ4 1352 aa16.6■□□□□ 0.25
GARNL3-210ENST00000453030 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
GARNL3-210ENST00000453030 MYOM1P52179 1685 aa16.59■□□□□ 0.25
GARNL3-210ENST00000453030 FAM208AQ9UK61 1670 aaKnown RBP16.59■□□□□ 0.25
GARNL3-210ENST00000453030 ERBB3P21860 1342 aa16.59■□□□□ 0.25
GARNL3-210ENST00000453030 EDC4Q6P2E9 1401 aaKnown RBP16.59■□□□□ 0.25
GARNL3-210ENST00000453030 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
GARNL3-210ENST00000453030 EXOC5O00471 708 aa16.57■□□□□ 0.24
GARNL3-210ENST00000453030 KCNQ2O43526 872 aa16.57■□□□□ 0.24
GARNL3-210ENST00000453030 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
GARNL3-210ENST00000453030 RGPD2P0DJD1 1756 aa16.56■□□□□ 0.24
GARNL3-210ENST00000453030 SLC12A5Q9H2X9 1139 aa16.56■□□□□ 0.24
GARNL3-210ENST00000453030 NLRP2Q9NX02 1062 aa16.56■□□□□ 0.24
GARNL3-210ENST00000453030 NINLQ9Y2I6 1382 aa16.55■□□□□ 0.24
GARNL3-210ENST00000453030 PROM2Q8N271 834 aa16.55■□□□□ 0.24
GARNL3-210ENST00000453030 PDGFDQ9GZP0 370 aaPredicted RBP16.55■□□□□ 0.24
GARNL3-210ENST00000453030 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
GARNL3-210ENST00000453030 PAPPAQ13219 1627 aa16.54■□□□□ 0.24
GARNL3-210ENST00000453030 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
GARNL3-210ENST00000453030 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
GARNL3-210ENST00000453030 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
GARNL3-210ENST00000453030 UTRNP46939 3433 aa16.53■□□□□ 0.24
GARNL3-210ENST00000453030 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
GARNL3-210ENST00000453030 ZBTB7AO95365 584 aa16.52■□□□□ 0.24
GARNL3-210ENST00000453030 IL2RBP14784 551 aa16.52■□□□□ 0.24
GARNL3-210ENST00000453030 SHANK3Q9BYB0 1731 aa16.52■□□□□ 0.24
GARNL3-210ENST00000453030 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
GARNL3-210ENST00000453030 KIF20BQ96Q89 1820 aa16.49■□□□□ 0.23
GARNL3-210ENST00000453030 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
GARNL3-210ENST00000453030 YY1P25490 414 aa16.49■□□□□ 0.23
GARNL3-210ENST00000453030 SLC15A2Q16348 729 aa16.48■□□□□ 0.23
GARNL3-210ENST00000453030 LTV1Q96GA3 475 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-210ENST00000453030 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
GARNL3-210ENST00000453030 ST20-MTHFSA0A0A6YYL1 179 aa16.47■□□□□ 0.23
GARNL3-210ENST00000453030 TESK2Q96S53 571 aa16.47■□□□□ 0.23
GARNL3-210ENST00000453030 QSER1Q2KHR3 1735 aa16.47■□□□□ 0.23
GARNL3-210ENST00000453030 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
GARNL3-210ENST00000453030 PTGER2P43116 358 aa16.46■□□□□ 0.23
GARNL3-210ENST00000453030 IP6K1Q92551 441 aa16.45■□□□□ 0.22
GARNL3-210ENST00000453030 COG3Q96JB2 828 aa16.45■□□□□ 0.22
GARNL3-210ENST00000453030 PUS7Q96PZ0 661 aaKnown RBP16.45■□□□□ 0.22
GARNL3-210ENST00000453030 LY75O60449 1722 aa16.45■□□□□ 0.22
GARNL3-210ENST00000453030 MAP3K19Q56UN5 1328 aa16.45■□□□□ 0.22
GARNL3-210ENST00000453030 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
GARNL3-210ENST00000453030 CHD4Q14839 1912 aa16.44■□□□□ 0.22
GARNL3-210ENST00000453030 FBLN1P23142 703 aa16.43■□□□□ 0.22
GARNL3-210ENST00000453030 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
GARNL3-210ENST00000453030 MEGF6O75095 1541 aa16.43■□□□□ 0.22
GARNL3-210ENST00000453030 HOXC9P31274 260 aa16.42■□□□□ 0.22
GARNL3-210ENST00000453030 AMPHP49418 695 aa16.42■□□□□ 0.22
GARNL3-210ENST00000453030 ZNF827Q17R98 1081 aa16.42■□□□□ 0.22
GARNL3-210ENST00000453030 MTFR1LQ9H019 292 aa16.42■□□□□ 0.22
GARNL3-210ENST00000453030 USP47Q96K76 1375 aa16.41■□□□□ 0.22
GARNL3-210ENST00000453030 FHDC1Q9C0D6 1143 aaPredicted RBP16.41■□□□□ 0.22
GARNL3-210ENST00000453030 RTL1A6NKG5 1358 aa16.4■□□□□ 0.22
GARNL3-210ENST00000453030 GOLGB1Q14789 3259 aaKnown RBP16.4■□□□□ 0.22
GARNL3-210ENST00000453030 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
GARNL3-210ENST00000453030 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
GARNL3-210ENST00000453030 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.21
GARNL3-210ENST00000453030 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms