RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 NOB1Q9ULX3 412 aaKnown RBP15.11■□□□□ 0.01
VTA1-203ENST00000452973 MON2Q7Z3U7 1717 aa15.11■□□□□ 0.01
VTA1-203ENST00000452973 DZIP1LQ8IYY4 767 aaKnown RBP15.1■□□□□ 0.01
VTA1-203ENST00000452973 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
VTA1-203ENST00000452973 IL16Q14005 1332 aa15.1■□□□□ 0.01
VTA1-203ENST00000452973 NLRP6P59044 892 aa15.1■□□□□ 0.01
VTA1-203ENST00000452973 PCDHB15Q9Y5E8 787 aa15.1■□□□□ 0.01
VTA1-203ENST00000452973 RIMS1Q86UR5 1692 aaKnown RBP15.09■□□□□ 0.01
VTA1-203ENST00000452973 ITPRIPQ8IWB1 547 aa15.09■□□□□ 0.01
VTA1-203ENST00000452973 TRIM27P14373 513 aa15.09■□□□□ 0.01
VTA1-203ENST00000452973 AKAP12Q02952 1782 aa15.08■□□□□ 0.01
VTA1-203ENST00000452973 AMPHP49418 695 aa15.08■□□□□ 0
VTA1-203ENST00000452973 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
VTA1-203ENST00000452973 MVPQ14764 893 aaKnown RBP15.07■□□□□ 0
VTA1-203ENST00000452973 TSPYL6Q8N831 410 aa15.07■□□□□ 0
VTA1-203ENST00000452973 MAP3K19Q56UN5 1328 aa15.07■□□□□ 0
VTA1-203ENST00000452973 CEP170BQ9Y4F5 1589 aaPredicted RBP15.07■□□□□ 0
VTA1-203ENST00000452973 PTCH1Q13635 1447 aa15.07■□□□□ 0
VTA1-203ENST00000452973 ATF7IPQ6VMQ6 1270 aa15.06■□□□□ 0
VTA1-203ENST00000452973 ABTB2Q8N961 1025 aa15.06■□□□□ 0
VTA1-203ENST00000452973 MBIPQ9NS73 344 aa15.06■□□□□ 0
VTA1-203ENST00000452973 RGPD8O14715 1765 aaPredicted RBP15.06■□□□□ 0
VTA1-203ENST00000452973 DIP2AQ14689 1571 aa15.05■□□□□ 0
VTA1-203ENST00000452973 OVOS2A0A0J9YW53 1432 aa15.05■□□□□ 0
VTA1-203ENST00000452973 OVOS2Q6IE36 1432 aa15.05■□□□□ 0
VTA1-203ENST00000452973 GNAI1P63096 354 aa15.05■□□□□ -0
VTA1-203ENST00000452973 MCM10Q7L590 875 aa15.05■□□□□ -0
VTA1-203ENST00000452973 IPO9Q96P70 1041 aaKnown RBP15.05■□□□□ -0
VTA1-203ENST00000452973 ZBTB7CA1YPR0 619 aa15.05■□□□□ -0
VTA1-203ENST00000452973 CALD1Q05682 793 aaKnown RBP15.05■□□□□ -0
VTA1-203ENST00000452973 LTV1Q96GA3 475 aaPredicted RBP15.05■□□□□ -0
VTA1-203ENST00000452973 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
VTA1-203ENST00000452973 TTC21AQ8NDW8 1320 aa15.04■□□□□ -0
VTA1-203ENST00000452973 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
VTA1-203ENST00000452973 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
VTA1-203ENST00000452973 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
VTA1-203ENST00000452973 ESCO1Q5FWF5 840 aa15.03■□□□□ -0
VTA1-203ENST00000452973 IFT57Q9NWB7 429 aa15.03■□□□□ -0
VTA1-203ENST00000452973 C8orf58Q8NAV2 365 aa15.02■□□□□ -0
VTA1-203ENST00000452973 TOPAZ1Q8N9V7 1692 aa15.02■□□□□ -0
VTA1-203ENST00000452973 IPO8O15397 1037 aaKnown RBP15.02□□□□□ -0.01
VTA1-203ENST00000452973 VAMP4O75379 141 aa15.02□□□□□ -0.01
VTA1-203ENST00000452973 TWISTNBQ3B726 338 aaPredicted RBP15.02□□□□□ -0.01
VTA1-203ENST00000452973 FOXO3O43524 673 aa15.01□□□□□ -0.01
VTA1-203ENST00000452973 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
VTA1-203ENST00000452973 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
VTA1-203ENST00000452973 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
VTA1-203ENST00000452973 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
VTA1-203ENST00000452973 XPCQ01831 940 aaPredicted RBP15.01□□□□□ -0.01
VTA1-203ENST00000452973 KRT24Q2M2I5 525 aa15.01□□□□□ -0.01
VTA1-203ENST00000452973 RWDD1Q9H446 243 aaPredicted RBP15.01□□□□□ -0.01
VTA1-203ENST00000452973 PHF8Q9UPP1 1060 aa15.01□□□□□ -0.01
VTA1-203ENST00000452973 MIS18AQ9NYP9 233 aa15□□□□□ -0.01
VTA1-203ENST00000452973 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
VTA1-203ENST00000452973 DDX19BQ9UMR2 479 aa15□□□□□ -0.01
VTA1-203ENST00000452973 USP31Q70CQ4 1352 aa15□□□□□ -0.01
VTA1-203ENST00000452973 LMOD2Q6P5Q4 547 aa14.99□□□□□ -0.01
VTA1-203ENST00000452973 PSME1Q06323 249 aa14.99□□□□□ -0.01
VTA1-203ENST00000452973 ALDH1L2Q3SY69 923 aa14.99□□□□□ -0.01
VTA1-203ENST00000452973 C8orf34Q49A92 452 aa14.99□□□□□ -0.01
VTA1-203ENST00000452973 ZNF853P0CG23 659 aa14.99□□□□□ -0.01
VTA1-203ENST00000452973 EYA1Q99502 592 aa14.99□□□□□ -0.01
VTA1-203ENST00000452973 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
VTA1-203ENST00000452973 XRN1Q8IZH2 1706 aaKnown RBP14.98□□□□□ -0.01
VTA1-203ENST00000452973 FLT4P35916 1363 aa14.98□□□□□ -0.01
VTA1-203ENST00000452973 PIK3R4Q99570 1358 aa14.98□□□□□ -0.01
VTA1-203ENST00000452973 PEAK1Q9H792 1746 aa14.97□□□□□ -0.01
VTA1-203ENST00000452973 AAMPQ13685 434 aa14.97□□□□□ -0.01
VTA1-203ENST00000452973 MTHFSDQ2M296 383 aaKnown RBP14.97□□□□□ -0.01
VTA1-203ENST00000452973 MRPL50Q8N5N7 158 aaKnown RBP14.97□□□□□ -0.01
VTA1-203ENST00000452973 SBNO1A3KN83 1393 aa14.97□□□□□ -0.01
VTA1-203ENST00000452973 USHBP1Q8N6Y0 703 aa14.96□□□□□ -0.01
VTA1-203ENST00000452973 RTF1Q92541 710 aaKnown RBP14.96□□□□□ -0.01
VTA1-203ENST00000452973 BCL11AQ9H165 835 aa14.96□□□□□ -0.01
VTA1-203ENST00000452973 DLG5Q8TDM6 1919 aa14.96□□□□□ -0.01
VTA1-203ENST00000452973 ORAI2Q96SN7 254 aa14.96□□□□□ -0.01
VTA1-203ENST00000452973 C1orf115Q9H7X2 142 aa14.96□□□□□ -0.01
VTA1-203ENST00000452973 HOXC9P31274 260 aa14.95□□□□□ -0.02
VTA1-203ENST00000452973 NBR1Q14596 966 aa14.95□□□□□ -0.02
VTA1-203ENST00000452973 ANKARQ7Z5J8 1434 aa14.95□□□□□ -0.02
VTA1-203ENST00000452973 ZNF428Q96B54 188 aa14.94□□□□□ -0.02
VTA1-203ENST00000452973 PROSER2Q86WR7 435 aaPredicted RBP14.93□□□□□ -0.02
VTA1-203ENST00000452973 ZBTB40Q9NUA8 1239 aa14.93□□□□□ -0.02
VTA1-203ENST00000452973 PIK3C2AO00443 1686 aa14.93□□□□□ -0.02
VTA1-203ENST00000452973 SETD1BQ9UPS6 1966 aaKnown RBP14.93□□□□□ -0.02
VTA1-203ENST00000452973 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
VTA1-203ENST00000452973 NPHP4O75161 1426 aaPredicted RBP14.93□□□□□ -0.02
VTA1-203ENST00000452973 CHL1O00533 1208 aa14.91□□□□□ -0.02
VTA1-203ENST00000452973 TSPYL4Q9UJ04 414 aa14.91□□□□□ -0.02
VTA1-203ENST00000452973 ARHGEF10O15013 1369 aa14.91□□□□□ -0.02
VTA1-203ENST00000452973 NALCNQ8IZF0 1738 aa14.91□□□□□ -0.02
VTA1-203ENST00000452973 SEC24BO95487 1268 aa14.91□□□□□ -0.02
VTA1-203ENST00000452973 IGSF1Q8N6C5 1336 aa14.9□□□□□ -0.02
VTA1-203ENST00000452973 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
VTA1-203ENST00000452973 ADAMTSL3P82987 1691 aa14.9□□□□□ -0.02
VTA1-203ENST00000452973 FMN2Q9NZ56 1722 aa14.9□□□□□ -0.02
VTA1-203ENST00000452973 CHD2O14647 1828 aaKnown RBP14.9□□□□□ -0.02
VTA1-203ENST00000452973 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
VTA1-203ENST00000452973 ZBTB7BO15156 539 aaPredicted RBP14.89□□□□□ -0.03
VTA1-203ENST00000452973 GAS2L2Q8NHY3 880 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms