RNA–Protein interactions for RNA: ENST00000452375.5

COPS7B-216, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-216ENST00000452375 ZFAND3Q9H8U3 227 aa12.42□□□□□ -0.42
COPS7B-216ENST00000452375 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
COPS7B-216ENST00000452375 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
COPS7B-216ENST00000452375 MPNDQ8N594 471 aa12.41□□□□□ -0.42
COPS7B-216ENST00000452375 ZIC2O95409 532 aaPredicted RBP12.4□□□□□ -0.42
COPS7B-216ENST00000452375 IRF7Q92985 503 aa12.4□□□□□ -0.42
COPS7B-216ENST00000452375 SLC24A3Q9HC58 644 aa12.4□□□□□ -0.42
COPS7B-216ENST00000452375 CCDC88BA6NC98 1476 aa12.4□□□□□ -0.43
COPS7B-216ENST00000452375 C6orf118Q5T5N4 469 aa12.39□□□□□ -0.43
COPS7B-216ENST00000452375 NR3C2P08235 984 aa12.38□□□□□ -0.43
COPS7B-216ENST00000452375 ITPKCQ96DU7 683 aa12.38□□□□□ -0.43
COPS7B-216ENST00000452375 POLA1P09884 1462 aaPredicted RBP12.38□□□□□ -0.43
COPS7B-216ENST00000452375 ERBB4Q15303 1308 aa12.37□□□□□ -0.43
COPS7B-216ENST00000452375 H3BM21 787 aa12.37□□□□□ -0.43
COPS7B-216ENST00000452375 CDK15Q96Q40 435 aa12.37□□□□□ -0.43
COPS7B-216ENST00000452375 KLF16Q9BXK1 252 aaPredicted RBP12.37□□□□□ -0.43
COPS7B-216ENST00000452375 TDRD9Q8NDG6 1382 aaKnown RBP12.37□□□□□ -0.43
COPS7B-216ENST00000452375 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
COPS7B-216ENST00000452375 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
COPS7B-216ENST00000452375 BPHLQ86WA6 291 aaPredicted RBP12.36□□□□□ -0.43
COPS7B-216ENST00000452375 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
COPS7B-216ENST00000452375 MAGEB6P1A0A0J9YX57 407 aa12.34□□□□□ -0.43
COPS7B-216ENST00000452375 LILRB3O75022 631 aa12.34□□□□□ -0.43
COPS7B-216ENST00000452375 SYNJ1O43426 1573 aa12.34□□□□□ -0.43
COPS7B-216ENST00000452375 NPAS3Q8IXF0 933 aa12.33□□□□□ -0.44
COPS7B-216ENST00000452375 POLR3EQ9NVU0 708 aa12.33□□□□□ -0.44
COPS7B-216ENST00000452375 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
COPS7B-216ENST00000452375 GRM5P41594 1212 aa12.32□□□□□ -0.44
COPS7B-216ENST00000452375 NR5A1Q13285 461 aa12.32□□□□□ -0.44
COPS7B-216ENST00000452375 HELBQ8NG08 1087 aaPredicted RBP12.32□□□□□ -0.44
COPS7B-216ENST00000452375 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
COPS7B-216ENST00000452375 MAN1A2O60476 641 aa12.31□□□□□ -0.44
COPS7B-216ENST00000452375 FSHRP23945 695 aa12.31□□□□□ -0.44
COPS7B-216ENST00000452375 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
COPS7B-216ENST00000452375 ZSCAN1Q8NBB4 408 aa12.31□□□□□ -0.44
COPS7B-216ENST00000452375 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
COPS7B-216ENST00000452375 SOGA1O94964 1423 aa12.3□□□□□ -0.44
COPS7B-216ENST00000452375 BMP2P12643 396 aa12.3□□□□□ -0.44
COPS7B-216ENST00000452375 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
COPS7B-216ENST00000452375 ARMC2Q8NEN0 867 aa12.29□□□□□ -0.44
COPS7B-216ENST00000452375 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
COPS7B-216ENST00000452375 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.44
COPS7B-216ENST00000452375 FAM181BA6NEQ2 426 aa12.27□□□□□ -0.45
COPS7B-216ENST00000452375 UPP2O95045 317 aa12.27□□□□□ -0.45
COPS7B-216ENST00000452375 TUSC1Q2TAM9 212 aa12.27□□□□□ -0.45
COPS7B-216ENST00000452375 LINC00528Q8N1L1 170 aa12.27□□□□□ -0.45
COPS7B-216ENST00000452375 LORP23490 312 aaPredicted RBP12.26□□□□□ -0.45
COPS7B-216ENST00000452375 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
COPS7B-216ENST00000452375 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
COPS7B-216ENST00000452375 C1QTNF2Q9BXJ5 285 aa12.25□□□□□ -0.45
COPS7B-216ENST00000452375 ATP1B4Q9UN42 357 aaPredicted RBP12.25□□□□□ -0.45
COPS7B-216ENST00000452375 ERCC6L2Q5T890 1561 aa12.25□□□□□ -0.45
COPS7B-216ENST00000452375 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
COPS7B-216ENST00000452375 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
COPS7B-216ENST00000452375 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
COPS7B-216ENST00000452375 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
COPS7B-216ENST00000452375 MEIOBQ8N635 442 aa12.24□□□□□ -0.45
COPS7B-216ENST00000452375 FGD5Q6ZNL6 1462 aa12.22□□□□□ -0.45
COPS7B-216ENST00000452375 KIF13AQ9H1H9 1805 aa12.21□□□□□ -0.45
COPS7B-216ENST00000452375 CCDC116Q8IYX3 515 aa12.21□□□□□ -0.45
COPS7B-216ENST00000452375 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
COPS7B-216ENST00000452375 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
COPS7B-216ENST00000452375 LRRN4Q8WUT4 740 aa12.2□□□□□ -0.46
COPS7B-216ENST00000452375 DNMT3LQ9UJW3 386 aa12.2□□□□□ -0.46
COPS7B-216ENST00000452375 MAP4K5Q9Y4K4 846 aa12.2□□□□□ -0.46
COPS7B-216ENST00000452375 TRMT44Q8IYL2 757 aaKnown RBP12.19□□□□□ -0.46
COPS7B-216ENST00000452375 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
COPS7B-216ENST00000452375 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
COPS7B-216ENST00000452375 SOS2Q07890 1332 aaPredicted RBP12.17□□□□□ -0.46
COPS7B-216ENST00000452375 CBLBQ13191 982 aa12.17□□□□□ -0.46
COPS7B-216ENST00000452375 ARHGAP9Q9BRR9 750 aa12.17□□□□□ -0.46
COPS7B-216ENST00000452375 CUX1P39880 1505 aa12.16□□□□□ -0.46
COPS7B-216ENST00000452375 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
COPS7B-216ENST00000452375 FIGNL2A6NMB9 653 aa12.16□□□□□ -0.46
COPS7B-216ENST00000452375 FBXO31Q5XUX0 539 aaPredicted RBP12.16□□□□□ -0.46
COPS7B-216ENST00000452375 TSEN34Q9BSV6 310 aaKnown RBP12.16□□□□□ -0.46
COPS7B-216ENST00000452375 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
COPS7B-216ENST00000452375 NR6A1Q15406 480 aa12.15□□□□□ -0.46
COPS7B-216ENST00000452375 PPP1R26Q5T8A7 1209 aaPredicted RBP12.15□□□□□ -0.46
COPS7B-216ENST00000452375 GPKOWQ92917 476 aaPredicted RBP eCLIP12.14□□□□□ -0.47
COPS7B-216ENST00000452375 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
COPS7B-216ENST00000452375 CEP170Q5SW79 1584 aa12.13□□□□□ -0.47
COPS7B-216ENST00000452375 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
COPS7B-216ENST00000452375 SLC10A4Q96EP9 437 aa12.13□□□□□ -0.47
COPS7B-216ENST00000452375 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
COPS7B-216ENST00000452375 TTLL8A6PVC2 850 aa12.12□□□□□ -0.47
COPS7B-216ENST00000452375 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
COPS7B-216ENST00000452375 KCTD15Q96SI1 283 aaPredicted RBP12.12□□□□□ -0.47
COPS7B-216ENST00000452375 PGPEP1Q9NXJ5 209 aa12.12□□□□□ -0.47
COPS7B-216ENST00000452375 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
COPS7B-216ENST00000452375 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
COPS7B-216ENST00000452375 AP1G2O75843 785 aa12.09□□□□□ -0.47
COPS7B-216ENST00000452375 RAB15P59190 212 aa12.09□□□□□ -0.47
COPS7B-216ENST00000452375 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
COPS7B-216ENST00000452375 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.09□□□□□ -0.47
COPS7B-216ENST00000452375 AGBL1Q96MI9 1066 aa12.09□□□□□ -0.47
COPS7B-216ENST00000452375 ABCA5Q8WWZ7 1642 aa12.08□□□□□ -0.48
COPS7B-216ENST00000452375 PTSQ03393 145 aa12.08□□□□□ -0.48
COPS7B-216ENST00000452375 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
COPS7B-216ENST00000452375 KDM4CQ9H3R0 1056 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms