RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 TOM1L2Q6ZVM7 507 aa26.05■■□□□ 1.76
PDLIM2-214ENST00000452226 CAMKK2Q96RR4 588 aa26.04■■□□□ 1.76
PDLIM2-214ENST00000452226 R3HDM1Q15032 1099 aaKnown RBP26.03■■□□□ 1.76
PDLIM2-214ENST00000452226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.03■■□□□ 1.76
PDLIM2-214ENST00000452226 TMC1Q8TDI8 760 aa26.03■■□□□ 1.76
PDLIM2-214ENST00000452226 WDR17Q8IZU2 1322 aa26.02■■□□□ 1.76
PDLIM2-214ENST00000452226 PARD3Q8TEW0 1356 aa26.02■■□□□ 1.76
PDLIM2-214ENST00000452226 NFAT5O94916 1531 aa26.01■■□□□ 1.75
PDLIM2-214ENST00000452226 CD163L1Q9NR16 1453 aa26■■□□□ 1.75
PDLIM2-214ENST00000452226 TIMELESSQ9UNS1 1208 aa26■■□□□ 1.75
PDLIM2-214ENST00000452226 C11orf95C9JLR9 678 aaPredicted RBP25.99■■□□□ 1.75
PDLIM2-214ENST00000452226 SLC12A5Q9H2X9 1139 aa25.99■■□□□ 1.75
PDLIM2-214ENST00000452226 WNK3Q9BYP7 1800 aa25.98■■□□□ 1.75
PDLIM2-214ENST00000452226 HDGFL2Q7Z4V5 671 aaPredicted RBP25.98■■□□□ 1.75
PDLIM2-214ENST00000452226 LRRC37A3O60309 1634 aa25.98■■□□□ 1.75
PDLIM2-214ENST00000452226 USP31Q70CQ4 1352 aa25.97■■□□□ 1.75
PDLIM2-214ENST00000452226 CSB-PGBD3P0DP91 1061 aa25.97■■□□□ 1.75
PDLIM2-214ENST00000452226 DDB1Q16531 1140 aa25.97■■□□□ 1.75
PDLIM2-214ENST00000452226 NME9Q86XW9 330 aa25.96■■□□□ 1.75
PDLIM2-214ENST00000452226 PEAK1Q9H792 1746 aa25.96■■□□□ 1.75
PDLIM2-214ENST00000452226 USP54Q70EL1 1684 aa25.96■■□□□ 1.75
PDLIM2-214ENST00000452226 OVOS2A0A0G2JMS6 1433 aa25.96■■□□□ 1.75
PDLIM2-214ENST00000452226 OVOS2A0A0J9YW53 1432 aa25.96■■□□□ 1.75
PDLIM2-214ENST00000452226 OVOS2Q6IE36 1432 aa25.96■■□□□ 1.75
PDLIM2-214ENST00000452226 NBPF14Q5TI25 921 aa25.95■■□□□ 1.74
PDLIM2-214ENST00000452226 PUS7Q96PZ0 661 aaKnown RBP25.95■■□□□ 1.74
PDLIM2-214ENST00000452226 CARD10Q9BWT7 1032 aa25.95■■□□□ 1.74
PDLIM2-214ENST00000452226 TERF2IPQ9NYB0 399 aa25.95■■□□□ 1.74
PDLIM2-214ENST00000452226 RREB1Q92766 1687 aa25.94■■□□□ 1.74
PDLIM2-214ENST00000452226 SBF2Q86WG5 1849 aa25.94■■□□□ 1.74
PDLIM2-214ENST00000452226 CDCA7Q9BWT1 371 aaPredicted RBP25.94■■□□□ 1.74
PDLIM2-214ENST00000452226 ST20-MTHFSA0A0A6YYL1 179 aa25.93■■□□□ 1.74
PDLIM2-214ENST00000452226 EDC4Q6P2E9 1401 aaKnown RBP25.93■■□□□ 1.74
PDLIM2-214ENST00000452226 ABCC6O95255 1503 aa25.93■■□□□ 1.74
PDLIM2-214ENST00000452226 CCER1Q8TC90 406 aaPredicted RBP25.92■■□□□ 1.74
PDLIM2-214ENST00000452226 TESK2Q96S53 571 aa25.92■■□□□ 1.74
PDLIM2-214ENST00000452226 A0A1W2PP64 1363 aa25.92■■□□□ 1.74
PDLIM2-214ENST00000452226 LTN1O94822 1766 aa25.91■■□□□ 1.74
PDLIM2-214ENST00000452226 NUP188Q5SRE5 1749 aa25.91■■□□□ 1.74
PDLIM2-214ENST00000452226 CCDC7Q96M83 1385 aa25.88■■□□□ 1.73
PDLIM2-214ENST00000452226 MARCH10Q8NA82 808 aaPredicted RBP25.88■■□□□ 1.73
PDLIM2-214ENST00000452226 SLC24A1O60721 1099 aa25.87■■□□□ 1.73
PDLIM2-214ENST00000452226 NINLQ9Y2I6 1382 aa25.86■■□□□ 1.73
PDLIM2-214ENST00000452226 EXOC5O00471 708 aa25.85■■□□□ 1.73
PDLIM2-214ENST00000452226 ERBB3P21860 1342 aa25.85■■□□□ 1.73
PDLIM2-214ENST00000452226 BCL11BQ9C0K0 894 aaPredicted RBP25.84■■□□□ 1.73
PDLIM2-214ENST00000452226 NLRP2Q9NX02 1062 aa25.84■■□□□ 1.73
PDLIM2-214ENST00000452226 RGPD3A6NKT7 1758 aaPredicted RBP25.83■■□□□ 1.73
PDLIM2-214ENST00000452226 RGPD4Q7Z3J3 1758 aa25.83■■□□□ 1.73
PDLIM2-214ENST00000452226 PTF1AQ7RTS3 328 aa25.83■■□□□ 1.73
PDLIM2-214ENST00000452226 BCL9O00512 1426 aa25.82■■□□□ 1.72
PDLIM2-214ENST00000452226 PLSCR1O15162 318 aa25.82■■□□□ 1.72
PDLIM2-214ENST00000452226 ANKRD24Q8TF21 1146 aa25.8■■□□□ 1.72
PDLIM2-214ENST00000452226 TNS2Q63HR2 1409 aa25.8■■□□□ 1.72
PDLIM2-214ENST00000452226 USP47Q96K76 1375 aa25.79■■□□□ 1.72
PDLIM2-214ENST00000452226 KAT6BQ8WYB5 2073 aa25.77■■□□□ 1.72
PDLIM2-214ENST00000452226 COG3Q96JB2 828 aa25.77■■□□□ 1.72
PDLIM2-214ENST00000452226 PPP1R1BQ9UD71 204 aaPredicted RBP25.77■■□□□ 1.72
PDLIM2-214ENST00000452226 IL2RBP14784 551 aa25.76■■□□□ 1.71
PDLIM2-214ENST00000452226 TMF1P82094 1093 aa25.76■■□□□ 1.71
PDLIM2-214ENST00000452226 IP6K1Q92551 441 aa25.76■■□□□ 1.71
PDLIM2-214ENST00000452226 SPON1Q9HCB6 807 aa25.76■■□□□ 1.71
PDLIM2-214ENST00000452226 ANKRD36BQ8N2N9 1353 aa25.75■■□□□ 1.71
PDLIM2-214ENST00000452226 DCAF8L1A6NGE4 600 aa25.74■■□□□ 1.71
PDLIM2-214ENST00000452226 PROM2Q8N271 834 aa25.72■■□□□ 1.71
PDLIM2-214ENST00000452226 KCNQ2O43526 872 aa25.71■■□□□ 1.71
PDLIM2-214ENST00000452226 LTV1Q96GA3 475 aaPredicted RBP25.71■■□□□ 1.71
PDLIM2-214ENST00000452226 FAM208AQ9UK61 1670 aaKnown RBP25.71■■□□□ 1.71
PDLIM2-214ENST00000452226 MAP3K19Q56UN5 1328 aa25.7■■□□□ 1.71
PDLIM2-214ENST00000452226 FBLN1P23142 703 aa25.7■■□□□ 1.7
PDLIM2-214ENST00000452226 ANO8Q9HCE9 1232 aaPredicted RBP25.7■■□□□ 1.7
PDLIM2-214ENST00000452226 NHSQ6T4R5 1651 aa25.7■■□□□ 1.7
PDLIM2-214ENST00000452226 AMPHP49418 695 aa25.69■■□□□ 1.7
PDLIM2-214ENST00000452226 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
PDLIM2-214ENST00000452226 ACSBG1Q96GR2 724 aa25.68■■□□□ 1.7
PDLIM2-214ENST00000452226 HOXC9P31274 260 aa25.67■■□□□ 1.7
PDLIM2-214ENST00000452226 TXNRD1Q16881 649 aa25.67■■□□□ 1.7
PDLIM2-214ENST00000452226 FYB1O15117 783 aa25.66■■□□□ 1.7
PDLIM2-214ENST00000452226 GGNBP2Q9H3C7 697 aa25.65■■□□□ 1.7
PDLIM2-214ENST00000452226 RGPD2P0DJD1 1756 aa25.64■■□□□ 1.7
PDLIM2-214ENST00000452226 BTAF1O14981 1849 aa25.63■■□□□ 1.69
PDLIM2-214ENST00000452226 CASZ1Q86V15 1759 aa25.62■■□□□ 1.69
PDLIM2-214ENST00000452226 RRS1Q15050 365 aaKnown RBP25.62■■□□□ 1.69
PDLIM2-214ENST00000452226 KIF20BQ96Q89 1820 aa25.62■■□□□ 1.69
PDLIM2-214ENST00000452226 DDX54Q8TDD1 881 aaKnown RBP25.61■■□□□ 1.69
PDLIM2-214ENST00000452226 STK32BQ9NY57 414 aa25.61■■□□□ 1.69
PDLIM2-214ENST00000452226 RTL1A6NKG5 1358 aa25.6■■□□□ 1.69
PDLIM2-214ENST00000452226 YY1P25490 414 aa25.59■■□□□ 1.69
PDLIM2-214ENST00000452226 PDGFDQ9GZP0 370 aaPredicted RBP25.59■■□□□ 1.69
PDLIM2-214ENST00000452226 MYOM1P52179 1685 aa25.58■■□□□ 1.69
PDLIM2-214ENST00000452226 SLC15A2Q16348 729 aa25.57■■□□□ 1.68
PDLIM2-214ENST00000452226 CARD14Q9BXL6 1004 aa25.55■■□□□ 1.68
PDLIM2-214ENST00000452226 ZBTB7AO95365 584 aa25.54■■□□□ 1.68
PDLIM2-214ENST00000452226 NBPF6Q5VWK0 638 aa25.54■■□□□ 1.68
PDLIM2-214ENST00000452226 ZCRB1Q8TBF4 217 aaKnown RBP25.54■■□□□ 1.68
PDLIM2-214ENST00000452226 NBPF4Q96M43 638 aa25.54■■□□□ 1.68
PDLIM2-214ENST00000452226 MEGF6O75095 1541 aa25.53■■□□□ 1.68
PDLIM2-214ENST00000452226 SHANK3Q9BYB0 1731 aa25.53■■□□□ 1.68
PDLIM2-214ENST00000452226 SMG6Q86US8 1419 aaKnown RBP25.53■■□□□ 1.68
PDLIM2-214ENST00000452226 NSD3Q9BZ95 1437 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms