RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 KIAA0232Q92628 1395 aa14.16□□□□□ -0.14
PKP4-206ENST00000452162 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
PKP4-206ENST00000452162 PLCH1Q4KWH8 1693 aa14.15□□□□□ -0.14
PKP4-206ENST00000452162 SOX12O15370 315 aa14.15□□□□□ -0.14
PKP4-206ENST00000452162 FNBP4Q8N3X1 1017 aaPredicted RBP14.15□□□□□ -0.14
PKP4-206ENST00000452162 RCAN3Q9UKA8 241 aa14.15□□□□□ -0.14
PKP4-206ENST00000452162 ZNF521Q96K83 1311 aa14.15□□□□□ -0.14
PKP4-206ENST00000452162 FYB1O15117 783 aa14.15□□□□□ -0.14
PKP4-206ENST00000452162 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
PKP4-206ENST00000452162 CHRNA2Q15822 529 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 B4GALNT3Q6L9W6 998 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 POTEAQ6S8J7 498 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 GGNBP2Q9H3C7 697 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 PRDM11Q9NQV5 511 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 NSD2O96028 1365 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 USP21Q9UK80 565 aa14.14□□□□□ -0.15
PKP4-206ENST00000452162 SLIT2O94813 1529 aa14.13□□□□□ -0.15
PKP4-206ENST00000452162 CGNL1Q0VF96 1302 aa14.13□□□□□ -0.15
PKP4-206ENST00000452162 COL14A1Q05707 1796 aaKnown RBP14.13□□□□□ -0.15
PKP4-206ENST00000452162 BCL9LQ86UU0 1499 aa14.13□□□□□ -0.15
PKP4-206ENST00000452162 ZNF772Q68DY9 489 aaPredicted RBP14.13□□□□□ -0.15
PKP4-206ENST00000452162 MORC1Q86VD1 984 aa14.13□□□□□ -0.15
PKP4-206ENST00000452162 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
PKP4-206ENST00000452162 NFAT5O94916 1531 aa14.12□□□□□ -0.15
PKP4-206ENST00000452162 ZBTB7CA1YPR0 619 aa14.11□□□□□ -0.15
PKP4-206ENST00000452162 COG3Q96JB2 828 aa14.11□□□□□ -0.15
PKP4-206ENST00000452162 CPDO75976 1380 aa14.11□□□□□ -0.15
PKP4-206ENST00000452162 KCNH5Q8NCM2 988 aa14.11□□□□□ -0.15
PKP4-206ENST00000452162 BTG4Q9NY30 223 aa14.11□□□□□ -0.15
PKP4-206ENST00000452162 LTN1O94822 1766 aa14.11□□□□□ -0.15
PKP4-206ENST00000452162 FBLN1P23142 703 aa14.1□□□□□ -0.15
PKP4-206ENST00000452162 QTRT2Q9H974 415 aaKnown RBP14.1□□□□□ -0.15
PKP4-206ENST00000452162 NRAPQ86VF7 1730 aa14.1□□□□□ -0.15
PKP4-206ENST00000452162 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.1□□□□□ -0.15
PKP4-206ENST00000452162 RGPD5Q99666 1765 aa14.1□□□□□ -0.15
PKP4-206ENST00000452162 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
PKP4-206ENST00000452162 COL18A1P39060 1754 aa14.09□□□□□ -0.15
PKP4-206ENST00000452162 LMO7Q8WWI1 1683 aa14.09□□□□□ -0.15
PKP4-206ENST00000452162 ARHGEF25Q86VW2 580 aa14.09□□□□□ -0.15
PKP4-206ENST00000452162 CCDC146Q8IYE0 955 aa14.09□□□□□ -0.15
PKP4-206ENST00000452162 CAMTA1Q9Y6Y1 1673 aa14.09□□□□□ -0.15
PKP4-206ENST00000452162 ANKRD26Q9UPS8 1709 aa14.08□□□□□ -0.16
PKP4-206ENST00000452162 ILDR2Q71H61 639 aa14.08□□□□□ -0.16
PKP4-206ENST00000452162 DUSP27Q5VZP5 1158 aa14.08□□□□□ -0.16
PKP4-206ENST00000452162 ATRNO75882 1429 aa14.07□□□□□ -0.16
PKP4-206ENST00000452162 TRPC5Q9UL62 973 aaPredicted RBP14.07□□□□□ -0.16
PKP4-206ENST00000452162 AXIN2Q9Y2T1 843 aa14.07□□□□□ -0.16
PKP4-206ENST00000452162 APAF1O14727 1248 aa14.07□□□□□ -0.16
PKP4-206ENST00000452162 TNNT2P45379 298 aaPredicted RBP14.07□□□□□ -0.16
PKP4-206ENST00000452162 GOLGA2Q08379 1002 aa14.07□□□□□ -0.16
PKP4-206ENST00000452162 AATKQ6ZMQ8 1374 aa14.06□□□□□ -0.16
PKP4-206ENST00000452162 NGEFQ8N5V2 710 aa14.06□□□□□ -0.16
PKP4-206ENST00000452162 TRMT2AQ8IZ69 625 aaKnown RBP14.05□□□□□ -0.16
PKP4-206ENST00000452162 STRN4Q9NRL3 753 aa14.05□□□□□ -0.16
PKP4-206ENST00000452162 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
PKP4-206ENST00000452162 MTHFSP49914 203 aa14.05□□□□□ -0.16
PKP4-206ENST00000452162 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
PKP4-206ENST00000452162 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
PKP4-206ENST00000452162 RBM19Q9Y4C8 960 aaKnown RBP14.05□□□□□ -0.16
PKP4-206ENST00000452162 RXRBP28702 533 aa14.04□□□□□ -0.16
PKP4-206ENST00000452162 RRS1Q15050 365 aaKnown RBP14.04□□□□□ -0.16
PKP4-206ENST00000452162 VPS72Q15906 364 aa14.04□□□□□ -0.16
PKP4-206ENST00000452162 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
PKP4-206ENST00000452162 CCDC9Q9Y3X0 531 aaKnown RBP14.04□□□□□ -0.16
PKP4-206ENST00000452162 COL5A2P05997 1499 aaPredicted RBP14.04□□□□□ -0.16
PKP4-206ENST00000452162 GLI3P10071 1580 aa14.04□□□□□ -0.16
PKP4-206ENST00000452162 MAP3K19Q56UN5 1328 aa14.04□□□□□ -0.16
PKP4-206ENST00000452162 EVA1CP58658 441 aa14.03□□□□□ -0.16
PKP4-206ENST00000452162 EXOC6Q8TAG9 804 aa14.03□□□□□ -0.16
PKP4-206ENST00000452162 GJD4Q96KN9 370 aaPredicted RBP14.03□□□□□ -0.16
PKP4-206ENST00000452162 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
PKP4-206ENST00000452162 LARP1Q6PKG0 1096 aaKnown RBP14.02□□□□□ -0.16
PKP4-206ENST00000452162 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
PKP4-206ENST00000452162 ABCC6O95255 1503 aa14.01□□□□□ -0.17
PKP4-206ENST00000452162 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
PKP4-206ENST00000452162 PEAK1Q9H792 1746 aa14.01□□□□□ -0.17
PKP4-206ENST00000452162 IP6K1Q92551 441 aa14.01□□□□□ -0.17
PKP4-206ENST00000452162 SPATA31A5Q5VU36 1347 aa14□□□□□ -0.17
PKP4-206ENST00000452162 SPATA31A7Q8IWB4 1347 aa14□□□□□ -0.17
PKP4-206ENST00000452162 AMPHP49418 695 aa14□□□□□ -0.17
PKP4-206ENST00000452162 RUNDC1Q96C34 613 aa14□□□□□ -0.17
PKP4-206ENST00000452162 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
PKP4-206ENST00000452162 PLIN1O60240 522 aa14□□□□□ -0.17
PKP4-206ENST00000452162 HOXC9P31274 260 aa14□□□□□ -0.17
PKP4-206ENST00000452162 USP35Q9P2H5 1018 aa14□□□□□ -0.17
PKP4-206ENST00000452162 E9PSI1 815 aa13.99□□□□□ -0.17
PKP4-206ENST00000452162 SPATA31A1Q5TZJ5 1347 aa13.99□□□□□ -0.17
PKP4-206ENST00000452162 WDR17Q8IZU2 1322 aa13.98□□□□□ -0.17
PKP4-206ENST00000452162 RGS12O14924 1447 aa13.98□□□□□ -0.17
PKP4-206ENST00000452162 WWC1Q8IX03 1113 aa13.98□□□□□ -0.17
PKP4-206ENST00000452162 POLKQ9UBT6 870 aa13.98□□□□□ -0.17
PKP4-206ENST00000452162 RGPD2P0DJD1 1756 aa13.97□□□□□ -0.17
PKP4-206ENST00000452162 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
PKP4-206ENST00000452162 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
PKP4-206ENST00000452162 FAM98CQ17RN3 349 aaKnown RBP13.97□□□□□ -0.17
PKP4-206ENST00000452162 TOM1L2Q6ZVM7 507 aa13.97□□□□□ -0.17
PKP4-206ENST00000452162 ANKRD24Q8TF21 1146 aa13.97□□□□□ -0.17
PKP4-206ENST00000452162 LTV1Q96GA3 475 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms