RNA–Protein interactions for RNA: ENST00000450510.2

HOXD8-203, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HOXD8, Length 1,268 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-203ENST00000450510 GGNBP2Q9H3C7 697 aa24.25■■□□□ 1.47
HOXD8-203ENST00000450510 RGS17Q9UGC6 210 aaPredicted RBP24.25■■□□□ 1.47
HOXD8-203ENST00000450510 NFAT5O94916 1531 aa24.25■■□□□ 1.47
HOXD8-203ENST00000450510 WDR43Q15061 677 aaKnown RBP eCLIP24.23■■□□□ 1.47
HOXD8-203ENST00000450510 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
HOXD8-203ENST00000450510 BCL9LQ86UU0 1499 aa24.23■■□□□ 1.47
HOXD8-203ENST00000450510 NWD2Q9ULI1 1742 aa24.23■■□□□ 1.47
HOXD8-203ENST00000450510 USP21Q9UK80 565 aa24.22■■□□□ 1.47
HOXD8-203ENST00000450510 SMG6Q86US8 1419 aaKnown RBP24.21■■□□□ 1.47
HOXD8-203ENST00000450510 UNC5CLQ8IV45 518 aa24.21■■□□□ 1.47
HOXD8-203ENST00000450510 ABCC6O95255 1503 aa24.2■■□□□ 1.47
HOXD8-203ENST00000450510 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.19■■□□□ 1.46
HOXD8-203ENST00000450510 PDE3BQ13370 1112 aa24.19■■□□□ 1.46
HOXD8-203ENST00000450510 BTG4Q9NY30 223 aa24.19■■□□□ 1.46
HOXD8-203ENST00000450510 PLCH1Q4KWH8 1693 aa24.18■■□□□ 1.46
HOXD8-203ENST00000450510 LMO7Q8WWI1 1683 aa24.18■■□□□ 1.46
HOXD8-203ENST00000450510 NEFLP07196 543 aa24.17■■□□□ 1.46
HOXD8-203ENST00000450510 CHRNA2Q15822 529 aa24.17■■□□□ 1.46
HOXD8-203ENST00000450510 TRPC5Q9UL62 973 aaPredicted RBP24.17■■□□□ 1.46
HOXD8-203ENST00000450510 QTRT2Q9H974 415 aaKnown RBP24.16■■□□□ 1.46
HOXD8-203ENST00000450510 COL18A1P39060 1754 aa24.16■■□□□ 1.46
HOXD8-203ENST00000450510 KIF24Q5T7B8 1368 aa24.16■■□□□ 1.46
HOXD8-203ENST00000450510 SOX12O15370 315 aa24.15■■□□□ 1.46
HOXD8-203ENST00000450510 CFAP53Q96M91 514 aa24.15■■□□□ 1.46
HOXD8-203ENST00000450510 ATRNO75882 1429 aa24.15■■□□□ 1.46
HOXD8-203ENST00000450510 VPS72Q15906 364 aa24.14■■□□□ 1.45
HOXD8-203ENST00000450510 CAMTA1Q9Y6Y1 1673 aa24.14■■□□□ 1.45
HOXD8-203ENST00000450510 POTEAQ6S8J7 498 aa24.13■■□□□ 1.45
HOXD8-203ENST00000450510 NGEFQ8N5V2 710 aa24.13■■□□□ 1.45
HOXD8-203ENST00000450510 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
HOXD8-203ENST00000450510 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
HOXD8-203ENST00000450510 NRAPQ86VF7 1730 aa24.13■■□□□ 1.45
HOXD8-203ENST00000450510 IP6K1Q92551 441 aa24.12■■□□□ 1.45
HOXD8-203ENST00000450510 MAP3K19Q56UN5 1328 aa24.11■■□□□ 1.45
HOXD8-203ENST00000450510 AXIN2Q9Y2T1 843 aa24.11■■□□□ 1.45
HOXD8-203ENST00000450510 RTL1A6NKG5 1358 aa24.11■■□□□ 1.45
HOXD8-203ENST00000450510 LTN1O94822 1766 aa24.11■■□□□ 1.45
HOXD8-203ENST00000450510 RBM6P78332 1123 aaKnown RBP24.1■■□□□ 1.45
HOXD8-203ENST00000450510 COL5A2P05997 1499 aaPredicted RBP24.09■■□□□ 1.45
HOXD8-203ENST00000450510 EVA1CP58658 441 aa24.09■■□□□ 1.45
HOXD8-203ENST00000450510 GJD4Q96KN9 370 aaPredicted RBP24.09■■□□□ 1.45
HOXD8-203ENST00000450510 ZBTB7CA1YPR0 619 aa24.08■■□□□ 1.45
HOXD8-203ENST00000450510 FBLN1P23142 703 aa24.08■■□□□ 1.45
HOXD8-203ENST00000450510 RXRBP28702 533 aa24.08■■□□□ 1.45
HOXD8-203ENST00000450510 AMPHP49418 695 aa24.07■■□□□ 1.44
HOXD8-203ENST00000450510 RRS1Q15050 365 aaKnown RBP24.07■■□□□ 1.44
HOXD8-203ENST00000450510 HOXC9P31274 260 aa24.06■■□□□ 1.44
HOXD8-203ENST00000450510 SUPT16HQ9Y5B9 1047 aaKnown RBP24.06■■□□□ 1.44
HOXD8-203ENST00000450510 FLT4P35916 1363 aa24.05■■□□□ 1.44
HOXD8-203ENST00000450510 MTHFSP49914 203 aa24.05■■□□□ 1.44
HOXD8-203ENST00000450510 POLKQ9UBT6 870 aa24.05■■□□□ 1.44
HOXD8-203ENST00000450510 CDK12Q9NYV4 1490 aaPredicted RBP24.05■■□□□ 1.44
HOXD8-203ENST00000450510 SPATA31A5Q5VU36 1347 aa24.05■■□□□ 1.44
HOXD8-203ENST00000450510 SPATA31A7Q8IWB4 1347 aa24.05■■□□□ 1.44
HOXD8-203ENST00000450510 WDR17Q8IZU2 1322 aa24.05■■□□□ 1.44
HOXD8-203ENST00000450510 STRN4Q9NRL3 753 aa24.04■■□□□ 1.44
HOXD8-203ENST00000450510 MAP2P11137 1827 aaKnown RBP24.04■■□□□ 1.44
HOXD8-203ENST00000450510 ONECUT3O60422 494 aaPredicted RBP24.03■■□□□ 1.44
HOXD8-203ENST00000450510 ERICH6BQ5W0A0 696 aa24.03■■□□□ 1.44
HOXD8-203ENST00000450510 ERBB3P21860 1342 aa24.03■■□□□ 1.44
HOXD8-203ENST00000450510 CRB1P82279 1406 aa24.02■■□□□ 1.44
HOXD8-203ENST00000450510 LARP1Q6PKG0 1096 aaKnown RBP24.02■■□□□ 1.44
HOXD8-203ENST00000450510 THRAP3Q9Y2W1 955 aaKnown RBP24.02■■□□□ 1.44
HOXD8-203ENST00000450510 SPATA31A1Q5TZJ5 1347 aa24.02■■□□□ 1.44
HOXD8-203ENST00000450510 RGPD5Q99666 1765 aa24.01■■□□□ 1.43
HOXD8-203ENST00000450510 TNNT2P45379 298 aaPredicted RBP24.01■■□□□ 1.43
HOXD8-203ENST00000450510 EMILIN1Q9Y6C2 1016 aa24.01■■□□□ 1.43
HOXD8-203ENST00000450510 COL3A1P02461 1466 aaPredicted RBP24■■□□□ 1.43
HOXD8-203ENST00000450510 GLI3P10071 1580 aa24■■□□□ 1.43
HOXD8-203ENST00000450510 NCBP3Q53F19 620 aaKnown RBP24■■□□□ 1.43
HOXD8-203ENST00000450510 CCDC9Q9Y3X0 531 aaKnown RBP24■■□□□ 1.43
HOXD8-203ENST00000450510 BARGINQ6ZT62 677 aa23.99■■□□□ 1.43
HOXD8-203ENST00000450510 ANKRD24Q8TF21 1146 aa23.99■■□□□ 1.43
HOXD8-203ENST00000450510 CARD10Q9BWT7 1032 aa23.99■■□□□ 1.43
HOXD8-203ENST00000450510 PEAK1Q9H792 1746 aa23.98■■□□□ 1.43
HOXD8-203ENST00000450510 FKBP8Q14318 412 aa23.98■■□□□ 1.43
HOXD8-203ENST00000450510 TOM1L2Q6ZVM7 507 aa23.98■■□□□ 1.43
HOXD8-203ENST00000450510 CSB-PGBD3P0DP91 1061 aa23.97■■□□□ 1.43
HOXD8-203ENST00000450510 HSP90AB2PQ58FF8 381 aa23.97■■□□□ 1.43
HOXD8-203ENST00000450510 TCP11L2Q8N4U5 519 aa23.97■■□□□ 1.43
HOXD8-203ENST00000450510 ZNF521Q96K83 1311 aa23.96■■□□□ 1.43
HOXD8-203ENST00000450510 FAM208AQ9UK61 1670 aaKnown RBP23.95■■□□□ 1.43
HOXD8-203ENST00000450510 RNF123Q5XPI4 1314 aa23.95■■□□□ 1.42
HOXD8-203ENST00000450510 PPM1GO15355 546 aaPredicted RBP23.94■■□□□ 1.42
HOXD8-203ENST00000450510 RUNDC1Q96C34 613 aa23.94■■□□□ 1.42
HOXD8-203ENST00000450510 CDCA7Q9BWT1 371 aaPredicted RBP23.93■■□□□ 1.42
HOXD8-203ENST00000450510 NLRP2Q9NX02 1062 aa23.92■■□□□ 1.42
HOXD8-203ENST00000450510 FAM98CQ17RN3 349 aaKnown RBP23.91■■□□□ 1.42
HOXD8-203ENST00000450510 LTV1Q96GA3 475 aaPredicted RBP23.9■■□□□ 1.42
HOXD8-203ENST00000450510 PNNQ9H307 717 aaKnown RBP23.9■■□□□ 1.42
HOXD8-203ENST00000450510 USP35Q9P2H5 1018 aa23.9■■□□□ 1.42
HOXD8-203ENST00000450510 RGS12O14924 1447 aa23.9■■□□□ 1.42
HOXD8-203ENST00000450510 GOLGA2Q08379 1002 aa23.89■■□□□ 1.41
HOXD8-203ENST00000450510 SEPT12Q8IYM1 358 aa23.89■■□□□ 1.41
HOXD8-203ENST00000450510 APAF1O14727 1248 aa23.88■■□□□ 1.41
HOXD8-203ENST00000450510 CCDC146Q8IYE0 955 aa23.88■■□□□ 1.41
HOXD8-203ENST00000450510 SALL2Q9Y467 1007 aaPredicted RBP23.88■■□□□ 1.41
HOXD8-203ENST00000450510 THSD7AQ9UPZ6 1657 aa23.88■■□□□ 1.41
HOXD8-203ENST00000450510 DIAPH1O60610 1272 aaKnown RBP23.87■■□□□ 1.41
HOXD8-203ENST00000450510 EIF4A2Q14240 407 aaKnown RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms