RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
SYNGAP1-204ENST00000449372 PAXIP1Q6ZW49 1069 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-204ENST00000449372 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-204ENST00000449372 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
SYNGAP1-204ENST00000449372 NKTRP30414 1462 aaKnown RBP16.85■□□□□ 0.29
SYNGAP1-204ENST00000449372 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
SYNGAP1-204ENST00000449372 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
SYNGAP1-204ENST00000449372 CABP1Q9NZU7 370 aa16.84■□□□□ 0.29
SYNGAP1-204ENST00000449372 CFAP53Q96M91 514 aa16.84■□□□□ 0.29
SYNGAP1-204ENST00000449372 LTKP29376 864 aa16.83■□□□□ 0.28
SYNGAP1-204ENST00000449372 ITSN1Q15811 1721 aa16.83■□□□□ 0.28
SYNGAP1-204ENST00000449372 WWC1Q8IX03 1113 aa16.83■□□□□ 0.28
SYNGAP1-204ENST00000449372 WASLO00401 505 aaPredicted RBP16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 UQCRHLA0A096LP55 91 aa16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 UQCRHP07919 91 aa16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 CHMP5Q9NZZ3 219 aa16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 GGNBP2Q9H3C7 697 aa16.82■□□□□ 0.28
SYNGAP1-204ENST00000449372 MAP2P11137 1827 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-204ENST00000449372 DDX11L8A8MPP1 907 aa16.81■□□□□ 0.28
SYNGAP1-204ENST00000449372 HDGFP51858 240 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-204ENST00000449372 GAS2L3Q86XJ1 694 aa16.81■□□□□ 0.28
SYNGAP1-204ENST00000449372 CCDC27Q2M243 656 aa16.81■□□□□ 0.28
SYNGAP1-204ENST00000449372 PPP4R3BQ5MIZ7 849 aa16.81■□□□□ 0.28
SYNGAP1-204ENST00000449372 IPO4Q8TEX9 1081 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-204ENST00000449372 CCDC173Q0VFZ6 552 aa16.8■□□□□ 0.28
SYNGAP1-204ENST00000449372 PPIP5K1Q6PFW1 1433 aa16.8■□□□□ 0.28
SYNGAP1-204ENST00000449372 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
SYNGAP1-204ENST00000449372 RWDD1Q9H446 243 aaPredicted RBP16.8■□□□□ 0.28
SYNGAP1-204ENST00000449372 EDC4Q6P2E9 1401 aaKnown RBP16.8■□□□□ 0.28
SYNGAP1-204ENST00000449372 ZSCAN20P17040 1043 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-204ENST00000449372 CEBPAP49715 358 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-204ENST00000449372 TXNDC2Q86VQ3 553 aa16.79■□□□□ 0.28
SYNGAP1-204ENST00000449372 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
SYNGAP1-204ENST00000449372 HDGFL2Q7Z4V5 671 aaPredicted RBP16.79■□□□□ 0.28
SYNGAP1-204ENST00000449372 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
SYNGAP1-204ENST00000449372 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
SYNGAP1-204ENST00000449372 CLUAP1Q96AJ1 413 aa16.78■□□□□ 0.28
SYNGAP1-204ENST00000449372 TCP11L2Q8N4U5 519 aa16.78■□□□□ 0.28
SYNGAP1-204ENST00000449372 DYNC1I1O14576 645 aa16.77■□□□□ 0.27
SYNGAP1-204ENST00000449372 PRR36Q9H6K5 1346 aa16.77■□□□□ 0.27
SYNGAP1-204ENST00000449372 CCDC94Q9BW85 323 aaPredicted RBP16.76■□□□□ 0.27
SYNGAP1-204ENST00000449372 RIMS1Q86UR5 1692 aaKnown RBP16.76■□□□□ 0.27
SYNGAP1-204ENST00000449372 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
SYNGAP1-204ENST00000449372 PPP1R9BQ96SB3 815 aa16.76■□□□□ 0.27
SYNGAP1-204ENST00000449372 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
SYNGAP1-204ENST00000449372 WDR63Q8IWG1 891 aa16.75■□□□□ 0.27
SYNGAP1-204ENST00000449372 TMEM51Q9NW97 253 aa16.75■□□□□ 0.27
SYNGAP1-204ENST00000449372 PTMSP20962 102 aa16.74■□□□□ 0.27
SYNGAP1-204ENST00000449372 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
SYNGAP1-204ENST00000449372 VIRMAQ69YN4 1812 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-204ENST00000449372 KIF20AO95235 890 aa16.74■□□□□ 0.27
SYNGAP1-204ENST00000449372 NUDT16Q96DE0 195 aaKnown RBP16.74■□□□□ 0.27
SYNGAP1-204ENST00000449372 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
SYNGAP1-204ENST00000449372 ZNF142P52746 1687 aaPredicted RBP16.74■□□□□ 0.27
SYNGAP1-204ENST00000449372 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
SYNGAP1-204ENST00000449372 LRRC7Q96NW7 1537 aa16.73■□□□□ 0.27
SYNGAP1-204ENST00000449372 NCKAP5LQ9HCH0 1330 aa16.73■□□□□ 0.27
SYNGAP1-204ENST00000449372 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
SYNGAP1-204ENST00000449372 POLKQ9UBT6 870 aa16.72■□□□□ 0.27
SYNGAP1-204ENST00000449372 ADAMTSL3P82987 1691 aa16.72■□□□□ 0.27
SYNGAP1-204ENST00000449372 GTPBP4Q9BZE4 634 aaKnown RBP16.72■□□□□ 0.27
SYNGAP1-204ENST00000449372 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
SYNGAP1-204ENST00000449372 IGHDP01880 384 aa16.71■□□□□ 0.27
SYNGAP1-204ENST00000449372 CT47B1P0C2W7 299 aaPredicted RBP16.71■□□□□ 0.27
SYNGAP1-204ENST00000449372 CDK12Q9NYV4 1490 aaPredicted RBP16.71■□□□□ 0.27
SYNGAP1-204ENST00000449372 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
SYNGAP1-204ENST00000449372 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.27
SYNGAP1-204ENST00000449372 SSH2Q76I76 1423 aa16.71■□□□□ 0.26
SYNGAP1-204ENST00000449372 VGLL3A8MV65 326 aa16.7■□□□□ 0.26
SYNGAP1-204ENST00000449372 RGPD8O14715 1765 aaPredicted RBP16.7■□□□□ 0.26
SYNGAP1-204ENST00000449372 U2AF1L5P0DN76 240 aaPredicted RBP16.7■□□□□ 0.26
SYNGAP1-204ENST00000449372 U2AF1Q01081 240 aaKnown RBP eCLIP16.7■□□□□ 0.26
SYNGAP1-204ENST00000449372 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
SYNGAP1-204ENST00000449372 BCAR3O75815 825 aa16.69■□□□□ 0.26
SYNGAP1-204ENST00000449372 TRIM35Q9UPQ4 493 aa16.69■□□□□ 0.26
SYNGAP1-204ENST00000449372 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
SYNGAP1-204ENST00000449372 FTSJ3Q8IY81 847 aaKnown RBP16.68■□□□□ 0.26
SYNGAP1-204ENST00000449372 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
SYNGAP1-204ENST00000449372 ZNF500O60304 480 aaPredicted RBP16.68■□□□□ 0.26
SYNGAP1-204ENST00000449372 SKOR2Q2VWA4 1001 aaPredicted RBP16.68■□□□□ 0.26
SYNGAP1-204ENST00000449372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.67■□□□□ 0.26
SYNGAP1-204ENST00000449372 PLEKHG3A1L390 1219 aa16.67■□□□□ 0.26
SYNGAP1-204ENST00000449372 NME9Q86XW9 330 aa16.67■□□□□ 0.26
SYNGAP1-204ENST00000449372 FBLN1P23142 703 aa16.67■□□□□ 0.26
SYNGAP1-204ENST00000449372 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
SYNGAP1-204ENST00000449372 OVOS2Q6IE36 1432 aa16.67■□□□□ 0.26
SYNGAP1-204ENST00000449372 ZNF830Q96NB3 372 aaPredicted RBP16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 DIAPH1O60610 1272 aaKnown RBP16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 RGPD1P0DJD0 1748 aa16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 PEAK1Q9H792 1746 aa16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 CSPP1Q1MSJ5 1256 aa16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 MARF1Q9Y4F3 1742 aaKnown RBP16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
SYNGAP1-204ENST00000449372 CBX1P83916 185 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms