RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 TRIM27P14373 513 aa8.65□□□□□ -1.02
BEST1-202ENST00000449131 MCM10Q7L590 875 aa8.65□□□□□ -1.02
BEST1-202ENST00000449131 DHX37Q8IY37 1157 aaKnown RBP8.65□□□□□ -1.02
BEST1-202ENST00000449131 DMRT2Q9Y5R5 561 aa8.65□□□□□ -1.02
BEST1-202ENST00000449131 GPRASP1Q5JY77 1395 aa8.65□□□□□ -1.03
BEST1-202ENST00000449131 PRAG1Q86YV5 1406 aa8.65□□□□□ -1.03
BEST1-202ENST00000449131 PARD3Q8TEW0 1356 aa8.65□□□□□ -1.03
BEST1-202ENST00000449131 FOSBP53539 338 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 PLEKHO1Q53GL0 409 aaPredicted RBP8.64□□□□□ -1.03
BEST1-202ENST00000449131 CCDC34Q96HJ3 373 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 APPP05067 770 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 LRRCC1Q9C099 1032 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 GRPEL1Q9HAV7 217 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 RLBP1P12271 317 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 CREBRFQ8IUR6 639 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
BEST1-202ENST00000449131 CCDC27Q2M243 656 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 RPAP2Q8IXW5 612 aaPredicted RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 SRCIN1Q9C0H9 1055 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 PLEKHH1Q9ULM0 1364 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 CPLX1O14810 134 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 THEMISQ8N1K5 641 aaPredicted RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 ZMYND15Q9H091 742 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 EXOC6BQ9Y2D4 811 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 ASXL2Q76L83 1435 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 FANCAO15360 1455 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 ZNF530Q6P9A1 599 aaPredicted RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 CPLX2Q6PUV4 134 aaKnown RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 CHMP4CQ96CF2 233 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 IL1RAPL2Q9NP60 686 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 FAM135AQ9P2D6 1515 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 MAP4K4O95819 1239 aaPredicted RBP8.63□□□□□ -1.03
BEST1-202ENST00000449131 ATF3P18847 181 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 ALDH1L2Q3SY69 923 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 RASSF8Q8NHQ8 419 aa8.63□□□□□ -1.03
BEST1-202ENST00000449131 ABCC11Q96J66 1382 aa8.62□□□□□ -1.03
BEST1-202ENST00000449131 MCM2P49736 904 aa8.62□□□□□ -1.03
BEST1-202ENST00000449131 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
BEST1-202ENST00000449131 A0A0U1RQG5 324 aaPredicted RBP8.62□□□□□ -1.03
BEST1-202ENST00000449131 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.62□□□□□ -1.03
BEST1-202ENST00000449131 IFT57Q9NWB7 429 aa8.62□□□□□ -1.03
BEST1-202ENST00000449131 PLCH2O75038 1416 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 ESPNB1AK53 854 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 SMARCA5O60264 1052 aaPredicted RBP8.61□□□□□ -1.03
BEST1-202ENST00000449131 MBD3O95983 291 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 RBM42Q9BTD8 480 aaKnown RBP8.61□□□□□ -1.03
BEST1-202ENST00000449131 PZPP20742 1482 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 ABCA8O94911 1581 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 FIBPO43427 364 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 SYNE3Q6ZMZ3 975 aa8.61□□□□□ -1.03
BEST1-202ENST00000449131 DNMT1P26358 1616 aaKnown RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 WASLO00401 505 aaPredicted RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 TRDNQ13061 729 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 WASHC4Q2M389 1173 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 PROSER2Q86WR7 435 aaPredicted RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 PSMA5P28066 241 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 SIL1Q9H173 461 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 CWC22Q9HCG8 908 aaKnown RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 CIZ1Q9ULV3 898 aaPredicted RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 ABCC10Q5T3U5 1492 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 ABCC2Q92887 1545 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 F6X3S4 739 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 SSFA2P28290 1259 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 AKAP17AQ02040 695 aaKnown RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 DNAJC2Q99543 621 aaKnown RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 KDM5BQ9UGL1 1544 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 XRCC6P12956 609 aaKnown RBP eCLIP8.6□□□□□ -1.03
BEST1-202ENST00000449131 SASS6Q6UVJ0 657 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 ZNF592Q92610 1267 aa8.6□□□□□ -1.03
BEST1-202ENST00000449131 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
BEST1-202ENST00000449131 FAM83GA6ND36 823 aa8.59□□□□□ -1.03
BEST1-202ENST00000449131 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.59□□□□□ -1.03
BEST1-202ENST00000449131 CARD14Q9BXL6 1004 aa8.59□□□□□ -1.03
BEST1-202ENST00000449131 FYB1O15117 783 aa8.59□□□□□ -1.03
BEST1-202ENST00000449131 XPCQ01831 940 aaPredicted RBP8.59□□□□□ -1.03
BEST1-202ENST00000449131 ASXL1Q8IXJ9 1541 aa8.59□□□□□ -1.03
BEST1-202ENST00000449131 DENND4BO75064 1496 aaPredicted RBP8.59□□□□□ -1.03
BEST1-202ENST00000449131 CCDC73Q6ZRK6 1079 aa8.59□□□□□ -1.03
BEST1-202ENST00000449131 DDX54Q8TDD1 881 aaKnown RBP8.59□□□□□ -1.03
BEST1-202ENST00000449131 ITSN2Q9NZM3 1697 aa8.59□□□□□ -1.03
BEST1-202ENST00000449131 GNAT3A8MTJ3 354 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 TRIM29Q14134 588 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 RALYLQ86SE5 291 aaKnown RBP8.58□□□□□ -1.04
BEST1-202ENST00000449131 TNPO1Q92973 898 aaKnown RBP8.58□□□□□ -1.04
BEST1-202ENST00000449131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.58□□□□□ -1.04
BEST1-202ENST00000449131 MBD5Q9P267 1494 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 MYL6BP14649 208 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 TSHZ3Q63HK5 1081 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 NFXL1Q6ZNB6 911 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 ERC1Q8IUD2 1116 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 UPF3BQ9BZI7 483 aaKnown RBP8.58□□□□□ -1.04
BEST1-202ENST00000449131 NSD2O96028 1365 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 DUOX2Q9NRD8 1548 aa8.58□□□□□ -1.04
BEST1-202ENST00000449131 TATP17735 454 aaPredicted RBP8.57□□□□□ -1.04
BEST1-202ENST00000449131 PDE4CQ08493 712 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms