RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 TTC21BQ7Z4L5 1316 aa35.05■■■■□ 3.2
HTATSF1-203ENST00000448450 NLRP6P59044 892 aa35.04■■■■□ 3.2
HTATSF1-203ENST00000448450 CRB1P82279 1406 aa35.01■■■■□ 3.2
HTATSF1-203ENST00000448450 HDGFL2Q7Z4V5 671 aaPredicted RBP35.01■■■■□ 3.2
HTATSF1-203ENST00000448450 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.99■■■■□ 3.19
HTATSF1-203ENST00000448450 CD163L1Q9NR16 1453 aa34.98■■■■□ 3.19
HTATSF1-203ENST00000448450 SLIT3O75094 1523 aa34.98■■■■□ 3.19
HTATSF1-203ENST00000448450 NBPF14Q5TI25 921 aa34.98■■■■□ 3.19
HTATSF1-203ENST00000448450 TERF2IPQ9NYB0 399 aa34.98■■■■□ 3.19
HTATSF1-203ENST00000448450 C11orf95C9JLR9 678 aaPredicted RBP34.97■■■■□ 3.19
HTATSF1-203ENST00000448450 ZBTB7CA1YPR0 619 aa34.96■■■■□ 3.19
HTATSF1-203ENST00000448450 EIF4G2P78344 907 aaKnown RBP eCLIP34.95■■■■□ 3.19
HTATSF1-203ENST00000448450 TTC21AQ8NDW8 1320 aa34.95■■■■□ 3.19
HTATSF1-203ENST00000448450 AATKQ6ZMQ8 1374 aa34.95■■■■□ 3.19
HTATSF1-203ENST00000448450 OVOS2A0A0G2JMS6 1433 aa34.95■■■■□ 3.19
HTATSF1-203ENST00000448450 OVOS2A0A0J9YW53 1432 aa34.95■■■■□ 3.19
HTATSF1-203ENST00000448450 OVOS2Q6IE36 1432 aa34.95■■■■□ 3.19
HTATSF1-203ENST00000448450 PIK3C2AO00443 1686 aa34.95■■■■□ 3.18
HTATSF1-203ENST00000448450 LRRC37A3O60309 1634 aa34.94■■■■□ 3.18
HTATSF1-203ENST00000448450 MON2Q7Z3U7 1717 aa34.94■■■■□ 3.18
HTATSF1-203ENST00000448450 PEAK1Q9H792 1746 aa34.93■■■■□ 3.18
HTATSF1-203ENST00000448450 HSPA5P11021 654 aaKnown RBP34.93■■■■□ 3.18
HTATSF1-203ENST00000448450 A0A1W2PP64 1363 aa34.92■■■■□ 3.18
HTATSF1-203ENST00000448450 CDCA8Q53HL2 280 aa34.92■■■■□ 3.18
HTATSF1-203ENST00000448450 RGPD3A6NKT7 1758 aaPredicted RBP34.92■■■■□ 3.18
HTATSF1-203ENST00000448450 RGPD4Q7Z3J3 1758 aa34.92■■■■□ 3.18
HTATSF1-203ENST00000448450 WNK3Q9BYP7 1800 aa34.9■■■■□ 3.18
HTATSF1-203ENST00000448450 NINLQ9Y2I6 1382 aa34.89■■■■□ 3.18
HTATSF1-203ENST00000448450 NME9Q86XW9 330 aa34.89■■■■□ 3.18
HTATSF1-203ENST00000448450 SBF2Q86WG5 1849 aa34.89■■■■□ 3.18
HTATSF1-203ENST00000448450 COL18A1P39060 1754 aa34.88■■■■□ 3.17
HTATSF1-203ENST00000448450 SOX12O15370 315 aa34.88■■■■□ 3.17
HTATSF1-203ENST00000448450 TOM1L2Q6ZVM7 507 aa34.86■■■■□ 3.17
HTATSF1-203ENST00000448450 POLR3GLQ9BT43 218 aa34.86■■■■□ 3.17
HTATSF1-203ENST00000448450 DDB1Q16531 1140 aa34.85■■■■□ 3.17
HTATSF1-203ENST00000448450 EDC4Q6P2E9 1401 aaKnown RBP34.85■■■■□ 3.17
HTATSF1-203ENST00000448450 WDR17Q8IZU2 1322 aa34.82■■■■□ 3.17
HTATSF1-203ENST00000448450 ANKRD36BQ8N2N9 1353 aa34.8■■■■□ 3.16
HTATSF1-203ENST00000448450 KCNH5Q8NCM2 988 aa34.8■■■■□ 3.16
HTATSF1-203ENST00000448450 SPON1Q9HCB6 807 aa34.8■■■■□ 3.16
HTATSF1-203ENST00000448450 PPP1R1BQ9UD71 204 aaPredicted RBP34.79■■■■□ 3.16
HTATSF1-203ENST00000448450 USP31Q70CQ4 1352 aa34.78■■■■□ 3.16
HTATSF1-203ENST00000448450 RGPD5Q99666 1765 aa34.78■■■■□ 3.16
HTATSF1-203ENST00000448450 PLSCR1O15162 318 aa34.77■■■■□ 3.16
HTATSF1-203ENST00000448450 CDCA7Q9BWT1 371 aaPredicted RBP34.77■■■■□ 3.16
HTATSF1-203ENST00000448450 AXIN2Q9Y2T1 843 aa34.77■■■■□ 3.16
HTATSF1-203ENST00000448450 KCNQ2O43526 872 aa34.75■■■■□ 3.15
HTATSF1-203ENST00000448450 BCL11BQ9C0K0 894 aaPredicted RBP34.75■■■■□ 3.15
HTATSF1-203ENST00000448450 ARHGEF25Q86VW2 580 aa34.74■■■■□ 3.15
HTATSF1-203ENST00000448450 BCL9O00512 1426 aa34.72■■■■□ 3.15
HTATSF1-203ENST00000448450 CSB-PGBD3P0DP91 1061 aa34.71■■■■□ 3.15
HTATSF1-203ENST00000448450 NFAT5O94916 1531 aa34.7■■■■□ 3.14
HTATSF1-203ENST00000448450 CASZ1Q86V15 1759 aa34.69■■■■□ 3.14
HTATSF1-203ENST00000448450 MARCH10Q8NA82 808 aaPredicted RBP34.69■■■■□ 3.14
HTATSF1-203ENST00000448450 CARD10Q9BWT7 1032 aa34.69■■■■□ 3.14
HTATSF1-203ENST00000448450 ABCC6O95255 1503 aa34.69■■■■□ 3.14
HTATSF1-203ENST00000448450 MYOM1P52179 1685 aa34.69■■■■□ 3.14
HTATSF1-203ENST00000448450 COG3Q96JB2 828 aa34.67■■■■□ 3.14
HTATSF1-203ENST00000448450 ANO8Q9HCE9 1232 aaPredicted RBP34.67■■■■□ 3.14
HTATSF1-203ENST00000448450 PTF1AQ7RTS3 328 aa34.66■■■■□ 3.14
HTATSF1-203ENST00000448450 CARD14Q9BXL6 1004 aa34.66■■■■□ 3.14
HTATSF1-203ENST00000448450 USP54Q70EL1 1684 aa34.66■■■■□ 3.14
HTATSF1-203ENST00000448450 DCAF8L1A6NGE4 600 aa34.65■■■■□ 3.14
HTATSF1-203ENST00000448450 YY1P25490 414 aa34.65■■■■□ 3.14
HTATSF1-203ENST00000448450 CCDC7Q96M83 1385 aa34.64■■■■□ 3.14
HTATSF1-203ENST00000448450 FYB1O15117 783 aa34.64■■■■□ 3.14
HTATSF1-203ENST00000448450 GGNBP2Q9H3C7 697 aa34.64■■■■□ 3.14
HTATSF1-203ENST00000448450 TNS2Q63HR2 1409 aa34.61■■■■□ 3.13
HTATSF1-203ENST00000448450 EXOC5O00471 708 aa34.6■■■■□ 3.13
HTATSF1-203ENST00000448450 NSD3Q9BZ95 1437 aa34.59■■■■□ 3.13
HTATSF1-203ENST00000448450 FBLN1P23142 703 aa34.59■■■■□ 3.13
HTATSF1-203ENST00000448450 PROM2Q8N271 834 aa34.58■■■■□ 3.13
HTATSF1-203ENST00000448450 LTN1O94822 1766 aa34.56■■■■□ 3.12
HTATSF1-203ENST00000448450 NHSQ6T4R5 1651 aa34.55■■■■□ 3.12
HTATSF1-203ENST00000448450 TXNRD1Q16881 649 aa34.54■■■■□ 3.12
HTATSF1-203ENST00000448450 PANK3Q9H999 370 aa34.54■■■■□ 3.12
HTATSF1-203ENST00000448450 STK32BQ9NY57 414 aa34.54■■■■□ 3.12
HTATSF1-203ENST00000448450 PDGFDQ9GZP0 370 aaPredicted RBP34.52■■■■□ 3.12
HTATSF1-203ENST00000448450 KIF20BQ96Q89 1820 aa34.52■■■■□ 3.12
HTATSF1-203ENST00000448450 ZBTB7AO95365 584 aa34.51■■■■□ 3.12
HTATSF1-203ENST00000448450 ERBB3P21860 1342 aa34.51■■■■□ 3.11
HTATSF1-203ENST00000448450 KIF7Q2M1P5 1343 aa34.5■■■■□ 3.11
HTATSF1-203ENST00000448450 NLRP2Q9NX02 1062 aa34.48■■■■□ 3.11
HTATSF1-203ENST00000448450 MAP3K19Q56UN5 1328 aa34.48■■■■□ 3.11
HTATSF1-203ENST00000448450 SLC15A2Q16348 729 aa34.47■■■■□ 3.11
HTATSF1-203ENST00000448450 IP6K1Q92551 441 aa34.47■■■■□ 3.11
HTATSF1-203ENST00000448450 CGNL1Q0VF96 1302 aa34.47■■■■□ 3.11
HTATSF1-203ENST00000448450 AMPHP49418 695 aa34.46■■■■□ 3.11
HTATSF1-203ENST00000448450 RRS1Q15050 365 aaKnown RBP34.46■■■■□ 3.11
HTATSF1-203ENST00000448450 PTGER2P43116 358 aa34.44■■■■□ 3.1
HTATSF1-203ENST00000448450 ANKRD24Q8TF21 1146 aa34.44■■■■□ 3.1
HTATSF1-203ENST00000448450 LTV1Q96GA3 475 aaPredicted RBP34.44■■■■□ 3.1
HTATSF1-203ENST00000448450 IL2RBP14784 551 aa34.43■■■■□ 3.1
HTATSF1-203ENST00000448450 ATF5Q9Y2D1 282 aaPredicted RBP34.43■■■■□ 3.1
HTATSF1-203ENST00000448450 BTAF1O14981 1849 aa34.41■■■■□ 3.1
HTATSF1-203ENST00000448450 HOXC9P31274 260 aa34.41■■■■□ 3.1
HTATSF1-203ENST00000448450 ACSBG1Q96GR2 724 aa34.41■■■■□ 3.1
HTATSF1-203ENST00000448450 MTFR1LQ9H019 292 aa34.39■■■■□ 3.1
HTATSF1-203ENST00000448450 PAPPAQ13219 1627 aa34.39■■■■□ 3.1
HTATSF1-203ENST00000448450 KAT6BQ8WYB5 2073 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms