RNA–Protein interactions for RNA: ENST00000448105.6

CALCOCO2-204, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-204ENST00000448105 SOX12O15370 315 aa8.41□□□□□ -1.06
CALCOCO2-204ENST00000448105 NLRP13Q86W25 1043 aa8.41□□□□□ -1.06
CALCOCO2-204ENST00000448105 BCL11BQ9C0K0 894 aaPredicted RBP8.41□□□□□ -1.06
CALCOCO2-204ENST00000448105 NLRP6P59044 892 aa8.41□□□□□ -1.06
CALCOCO2-204ENST00000448105 TOM1L2Q6ZVM7 507 aa8.41□□□□□ -1.06
CALCOCO2-204ENST00000448105 PROM2Q8N271 834 aa8.41□□□□□ -1.06
CALCOCO2-204ENST00000448105 DDB1Q16531 1140 aa8.4□□□□□ -1.06
CALCOCO2-204ENST00000448105 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
CALCOCO2-204ENST00000448105 AXIN2Q9Y2T1 843 aa8.4□□□□□ -1.06
CALCOCO2-204ENST00000448105 POLR3AO14802 1390 aaPredicted RBP8.4□□□□□ -1.07
CALCOCO2-204ENST00000448105 USP19O94966 1318 aa8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 GOLGB1Q14789 3259 aaKnown RBP8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 CPDO75976 1380 aa8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 CRYBG1Q9Y4K1 1723 aa8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 OVOS2A0A0G2JMS6 1433 aa8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 OVOS2A0A0J9YW53 1432 aa8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 OVOS2Q6IE36 1432 aa8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 MARCH10Q8NA82 808 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 MTFR1LQ9H019 292 aa8.39□□□□□ -1.07
CALCOCO2-204ENST00000448105 RREB1Q92766 1687 aa8.38□□□□□ -1.07
CALCOCO2-204ENST00000448105 GIGYF1O75420 1035 aaPredicted RBP8.38□□□□□ -1.07
CALCOCO2-204ENST00000448105 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
CALCOCO2-204ENST00000448105 PPIP5K1Q6PFW1 1433 aa8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 PHRF1Q9P1Y6 1649 aaKnown RBP8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 CSB-PGBD3P0DP91 1061 aa8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 PTGER2P43116 358 aa8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 CRB1P82279 1406 aa8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 SLC4A2P04920 1241 aa8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 SLC16A10Q8TF71 515 aa8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 SYT17Q9BSW7 474 aa8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 FHDC1Q9C0D6 1143 aaPredicted RBP8.37□□□□□ -1.07
CALCOCO2-204ENST00000448105 NUP188Q5SRE5 1749 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 NRKQ7Z2Y5 1582 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 MAP3K5Q99683 1374 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 GRIN3BO60391 1043 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 SLC15A2Q16348 729 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 TXNRD1Q16881 649 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 ACSBG1Q96GR2 724 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 BCL9O00512 1426 aa8.36□□□□□ -1.07
CALCOCO2-204ENST00000448105 RGPD3A6NKT7 1758 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 RGPD4Q7Z3J3 1758 aa8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 POLD1P28340 1107 aa8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 GPR162Q16538 588 aa8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 CENPJQ9HC77 1338 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 CEP350Q5VT06 3117 aa8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 AATKQ6ZMQ8 1374 aa8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 EXOC5O00471 708 aa8.35□□□□□ -1.07
CALCOCO2-204ENST00000448105 ARHGEF28Q8N1W1 1705 aaKnown RBP8.34□□□□□ -1.07
CALCOCO2-204ENST00000448105 WDR17Q8IZU2 1322 aa8.34□□□□□ -1.07
CALCOCO2-204ENST00000448105 LMO7Q8WWI1 1683 aa8.33□□□□□ -1.08
CALCOCO2-204ENST00000448105 KLHL34Q8N239 644 aa8.33□□□□□ -1.08
CALCOCO2-204ENST00000448105 ITSN1Q15811 1721 aa8.33□□□□□ -1.08
CALCOCO2-204ENST00000448105 CHD4Q14839 1912 aa8.33□□□□□ -1.08
CALCOCO2-204ENST00000448105 USP6P35125 1406 aa8.33□□□□□ -1.08
CALCOCO2-204ENST00000448105 ARHGEF25Q86VW2 580 aa8.33□□□□□ -1.08
CALCOCO2-204ENST00000448105 KCNH5Q8NCM2 988 aa8.33□□□□□ -1.08
CALCOCO2-204ENST00000448105 PELP1Q8IZL8 1130 aaKnown RBP8.32□□□□□ -1.08
CALCOCO2-204ENST00000448105 CARD10Q9BWT7 1032 aa8.32□□□□□ -1.08
CALCOCO2-204ENST00000448105 TTC21BQ7Z4L5 1316 aa8.32□□□□□ -1.08
CALCOCO2-204ENST00000448105 PARP4Q9UKK3 1724 aaKnown RBP8.31□□□□□ -1.08
CALCOCO2-204ENST00000448105 KCNQ4P56696 695 aa8.31□□□□□ -1.08
CALCOCO2-204ENST00000448105 ZNF827Q17R98 1081 aa8.31□□□□□ -1.08
CALCOCO2-204ENST00000448105 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.31□□□□□ -1.08
CALCOCO2-204ENST00000448105 SGIP1Q9BQI5 828 aa8.31□□□□□ -1.08
CALCOCO2-204ENST00000448105 ZNF692Q9BU19 519 aaPredicted RBP8.31□□□□□ -1.08
CALCOCO2-204ENST00000448105 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
CALCOCO2-204ENST00000448105 TOPAZ1Q8N9V7 1692 aa8.3□□□□□ -1.08
CALCOCO2-204ENST00000448105 PEAK1Q9H792 1746 aa8.3□□□□□ -1.08
CALCOCO2-204ENST00000448105 CCDC7Q96M83 1385 aa8.3□□□□□ -1.08
CALCOCO2-204ENST00000448105 LRRC37A3O60309 1634 aa8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 MAPK8IP2Q13387 824 aaPredicted RBP8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 SLC27A3Q5K4L6 730 aa8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 LRRC4BQ9NT99 713 aa8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 CPSF1Q10570 1443 aaKnown RBP8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 MYOM1P52179 1685 aa8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 L3MBTL2Q969R5 705 aa8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
CALCOCO2-204ENST00000448105 ATXN8OSP0DMR3 200 aa8.28□□□□□ -1.08
CALCOCO2-204ENST00000448105 NME9Q86XW9 330 aa8.28□□□□□ -1.08
CALCOCO2-204ENST00000448105 DDX54Q8TDD1 881 aaKnown RBP8.28□□□□□ -1.08
CALCOCO2-204ENST00000448105 SIN3AQ96ST3 1273 aa8.28□□□□□ -1.08
CALCOCO2-204ENST00000448105 SLIT3O75094 1523 aa8.28□□□□□ -1.08
CALCOCO2-204ENST00000448105 CASZ1Q86V15 1759 aa8.28□□□□□ -1.08
CALCOCO2-204ENST00000448105 NEUROD1Q13562 356 aa8.27□□□□□ -1.09
CALCOCO2-204ENST00000448105 HOMEZQ8IX15 550 aa8.27□□□□□ -1.09
CALCOCO2-204ENST00000448105 LTV1Q96GA3 475 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-204ENST00000448105 SYTL4Q96C24 671 aaPredicted RBP8.27□□□□□ -1.09
CALCOCO2-204ENST00000448105 KTN1Q86UP2 1357 aaKnown RBP8.26□□□□□ -1.09
CALCOCO2-204ENST00000448105 IL2RBP14784 551 aa8.26□□□□□ -1.09
CALCOCO2-204ENST00000448105 NLGN2Q8NFZ4 835 aa8.26□□□□□ -1.09
CALCOCO2-204ENST00000448105 TMC1Q8TDI8 760 aa8.26□□□□□ -1.09
CALCOCO2-204ENST00000448105 ANKRD24Q8TF21 1146 aa8.26□□□□□ -1.09
CALCOCO2-204ENST00000448105 SBF2Q86WG5 1849 aa8.26□□□□□ -1.09
CALCOCO2-204ENST00000448105 COL18A1P39060 1754 aa8.25□□□□□ -1.09
CALCOCO2-204ENST00000448105 PIK3C2AO00443 1686 aa8.25□□□□□ -1.09
CALCOCO2-204ENST00000448105 FLAD1Q8NFF5 587 aa8.25□□□□□ -1.09
CALCOCO2-204ENST00000448105 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
CALCOCO2-204ENST00000448105 TNS2Q63HR2 1409 aa8.25□□□□□ -1.09
CALCOCO2-204ENST00000448105 ERBB3P21860 1342 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms