RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 TRAK1Q9UPV9 953 aa19.67■□□□□ 0.74
CNOT3-204ENST00000447684 QRICH2Q9H0J4 1663 aa19.67■□□□□ 0.74
CNOT3-204ENST00000447684 TMPOP42166 694 aaKnown RBP19.66■□□□□ 0.74
CNOT3-204ENST00000447684 FOXD4L6Q3SYB3 417 aaPredicted RBP19.66■□□□□ 0.74
CNOT3-204ENST00000447684 FOXD4L3Q6VB84 417 aaPredicted RBP19.66■□□□□ 0.74
CNOT3-204ENST00000447684 MROH2AA6NES4 1674 aa19.66■□□□□ 0.74
CNOT3-204ENST00000447684 MYRIPQ8NFW9 859 aa19.65■□□□□ 0.74
CNOT3-204ENST00000447684 GCC1Q96CN9 775 aa19.65■□□□□ 0.74
CNOT3-204ENST00000447684 FGD1P98174 961 aa19.65■□□□□ 0.74
CNOT3-204ENST00000447684 C17orf53Q8N3J3 647 aaPredicted RBP19.65■□□□□ 0.74
CNOT3-204ENST00000447684 NOS1P29475 1434 aa19.64■□□□□ 0.73
CNOT3-204ENST00000447684 CYP2E1P05181 493 aaPredicted RBP19.64■□□□□ 0.73
CNOT3-204ENST00000447684 PPP4R3BQ5MIZ7 849 aa19.64■□□□□ 0.73
CNOT3-204ENST00000447684 UTP14CQ5TAP6 766 aaKnown RBP19.64■□□□□ 0.73
CNOT3-204ENST00000447684 TRIM35Q9UPQ4 493 aa19.64■□□□□ 0.73
CNOT3-204ENST00000447684 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
CNOT3-204ENST00000447684 SPDYE4A6NLX3 237 aa19.63■□□□□ 0.73
CNOT3-204ENST00000447684 CD109Q6YHK3 1445 aa19.62■□□□□ 0.73
CNOT3-204ENST00000447684 ST18O60284 1047 aa19.62■□□□□ 0.73
CNOT3-204ENST00000447684 GSPT1P15170 499 aaKnown RBP19.62■□□□□ 0.73
CNOT3-204ENST00000447684 ZNF710Q8N1W2 664 aa19.62■□□□□ 0.73
CNOT3-204ENST00000447684 PPIP5K1Q6PFW1 1433 aa19.62■□□□□ 0.73
CNOT3-204ENST00000447684 NSD2O96028 1365 aa19.62■□□□□ 0.73
CNOT3-204ENST00000447684 ZDHHC9Q9Y397 364 aa19.61■□□□□ 0.73
CNOT3-204ENST00000447684 IGSF3O75054 1194 aa19.61■□□□□ 0.73
CNOT3-204ENST00000447684 CHGAP10645 457 aaKnown RBP19.61■□□□□ 0.73
CNOT3-204ENST00000447684 TSPY26PQ9H489 355 aa19.61■□□□□ 0.73
CNOT3-204ENST00000447684 CWC22Q9HCG8 908 aaKnown RBP19.61■□□□□ 0.73
CNOT3-204ENST00000447684 APBB1O00213 710 aa19.61■□□□□ 0.73
CNOT3-204ENST00000447684 ELL2O00472 640 aaPredicted RBP19.6■□□□□ 0.73
CNOT3-204ENST00000447684 ATP2B3Q16720 1220 aa19.6■□□□□ 0.73
CNOT3-204ENST00000447684 AFAP1Q8N556 730 aa19.6■□□□□ 0.73
CNOT3-204ENST00000447684 ARHGAP31Q2M1Z3 1444 aa19.59■□□□□ 0.73
CNOT3-204ENST00000447684 TTC12Q9H892 705 aaPredicted RBP19.59■□□□□ 0.73
CNOT3-204ENST00000447684 ZBTB7BO15156 539 aaPredicted RBP19.59■□□□□ 0.73
CNOT3-204ENST00000447684 NOL8Q76FK4 1167 aaKnown RBP19.59■□□□□ 0.73
CNOT3-204ENST00000447684 IL16Q14005 1332 aa19.59■□□□□ 0.73
CNOT3-204ENST00000447684 PLCB2Q00722 1185 aa19.58■□□□□ 0.73
CNOT3-204ENST00000447684 PLEKHF1Q96S99 279 aa19.58■□□□□ 0.73
CNOT3-204ENST00000447684 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.72
CNOT3-204ENST00000447684 NOLC1Q14978 699 aaKnown RBP eCLIP19.58■□□□□ 0.72
CNOT3-204ENST00000447684 USP26Q9BXU7 913 aa19.58■□□□□ 0.72
CNOT3-204ENST00000447684 SIRT2Q8IXJ6 389 aa19.57■□□□□ 0.72
CNOT3-204ENST00000447684 C16orf71Q8IYS4 520 aaPredicted RBP19.57■□□□□ 0.72
CNOT3-204ENST00000447684 KIF3AQ9Y496 699 aa19.57■□□□□ 0.72
CNOT3-204ENST00000447684 MBD3O95983 291 aa19.57■□□□□ 0.72
CNOT3-204ENST00000447684 HMGN5P82970 282 aaKnown RBP19.57■□□□□ 0.72
CNOT3-204ENST00000447684 BBXQ8WY36 941 aaPredicted RBP19.57■□□□□ 0.72
CNOT3-204ENST00000447684 ATP7AQ04656 1500 aa19.57■□□□□ 0.72
CNOT3-204ENST00000447684 EFCAB6Q5THR3 1501 aa19.57■□□□□ 0.72
CNOT3-204ENST00000447684 USP25Q9UHP3 1055 aa19.56■□□□□ 0.72
CNOT3-204ENST00000447684 ZCCHC11Q5TAX3 1644 aaKnown RBP19.56■□□□□ 0.72
CNOT3-204ENST00000447684 ADGRB1O14514 1584 aa19.56■□□□□ 0.72
CNOT3-204ENST00000447684 ADGRB3O60242 1522 aa19.56■□□□□ 0.72
CNOT3-204ENST00000447684 ANKRD36BQ8N2N9 1353 aa19.56■□□□□ 0.72
CNOT3-204ENST00000447684 PRIMPOLQ96LW4 560 aa19.56■□□□□ 0.72
CNOT3-204ENST00000447684 MED14O60244 1454 aa19.56■□□□□ 0.72
CNOT3-204ENST00000447684 GDPD2Q9HCC8 539 aa19.55■□□□□ 0.72
CNOT3-204ENST00000447684 PPRC1Q5VV67 1664 aaKnown RBP19.55■□□□□ 0.72
CNOT3-204ENST00000447684 INTS3Q68E01 1043 aaKnown RBP19.55■□□□□ 0.72
CNOT3-204ENST00000447684 GTPBP4Q9BZE4 634 aaKnown RBP19.55■□□□□ 0.72
CNOT3-204ENST00000447684 ARAP3Q8WWN8 1544 aa19.55■□□□□ 0.72
CNOT3-204ENST00000447684 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
CNOT3-204ENST00000447684 PLEKHM2Q8IWE5 1019 aa19.55■□□□□ 0.72
CNOT3-204ENST00000447684 KIF3BO15066 747 aa19.54■□□□□ 0.72
CNOT3-204ENST00000447684 ALDH1L2Q3SY69 923 aa19.54■□□□□ 0.72
CNOT3-204ENST00000447684 REREQ9P2R6 1566 aa19.53■□□□□ 0.72
CNOT3-204ENST00000447684 PIBF1Q8WXW3 757 aa19.53■□□□□ 0.72
CNOT3-204ENST00000447684 COL3A1P02461 1466 aaPredicted RBP19.53■□□□□ 0.72
CNOT3-204ENST00000447684 PDCL2Q8N4E4 241 aa19.53■□□□□ 0.72
CNOT3-204ENST00000447684 OTUD7AQ8TE49 926 aaPredicted RBP19.53■□□□□ 0.72
CNOT3-204ENST00000447684 GGNBP2Q9H3C7 697 aa19.53■□□□□ 0.72
CNOT3-204ENST00000447684 BCL2L12Q9HB09 334 aa19.53■□□□□ 0.72
CNOT3-204ENST00000447684 CASC1Q6TDU7 716 aa19.52■□□□□ 0.72
CNOT3-204ENST00000447684 SYAP1Q96A49 352 aaPredicted RBP19.52■□□□□ 0.72
CNOT3-204ENST00000447684 FANCAO15360 1455 aa19.52■□□□□ 0.72
CNOT3-204ENST00000447684 PPLO60437 1756 aa19.52■□□□□ 0.72
CNOT3-204ENST00000447684 TTC22Q5TAA0 569 aa19.52■□□□□ 0.72
CNOT3-204ENST00000447684 CHMP4BQ9H444 224 aaKnown RBP19.52■□□□□ 0.72
CNOT3-204ENST00000447684 C14orf93Q9H972 538 aaKnown RBP19.52■□□□□ 0.72
CNOT3-204ENST00000447684 ATAD2Q6PL18 1390 aa19.52■□□□□ 0.71
CNOT3-204ENST00000447684 SAFB2Q14151 953 aaKnown RBP eCLIP19.51■□□□□ 0.71
CNOT3-204ENST00000447684 PUS7Q96PZ0 661 aaKnown RBP19.51■□□□□ 0.71
CNOT3-204ENST00000447684 KIF20AO95235 890 aa19.51■□□□□ 0.71
CNOT3-204ENST00000447684 NEK4P51957 841 aa19.51■□□□□ 0.71
CNOT3-204ENST00000447684 THUMPD2Q9BTF0 503 aaKnown RBP19.51■□□□□ 0.71
CNOT3-204ENST00000447684 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
CNOT3-204ENST00000447684 ERCC6L2Q5T890 1561 aa19.5■□□□□ 0.71
CNOT3-204ENST00000447684 LETM1O95202 739 aaPredicted RBP19.5■□□□□ 0.71
CNOT3-204ENST00000447684 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.71
CNOT3-204ENST00000447684 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
CNOT3-204ENST00000447684 CHD1O14646 1710 aa19.49■□□□□ 0.71
CNOT3-204ENST00000447684 ADCY5O95622 1261 aa19.49■□□□□ 0.71
CNOT3-204ENST00000447684 GADD45BO75293 160 aaPredicted RBP19.49■□□□□ 0.71
CNOT3-204ENST00000447684 SDSP20132 328 aa19.49■□□□□ 0.71
CNOT3-204ENST00000447684 SMARCA5O60264 1052 aaPredicted RBP19.48■□□□□ 0.71
CNOT3-204ENST00000447684 TSPYL6Q8N831 410 aa19.48■□□□□ 0.71
CNOT3-204ENST00000447684 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
CNOT3-204ENST00000447684 EVC2Q86UK5 1308 aa19.48■□□□□ 0.71
CNOT3-204ENST00000447684 TMX3Q96JJ7 454 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms