RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 RNF20Q5VTR2 975 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 TESK2Q96S53 571 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 ARGLU1Q9NWB6 273 aaPredicted RBP5.93□□□□□ -1.46
SRRM1-203ENST00000447431 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.464e-9■□□□□ 9.2
SRRM1-203ENST00000447431 DISP3Q9P2K9 1392 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 NUCB1Q02818 461 aa5.93□□□□□ -1.46
SRRM1-203ENST00000447431 ZRSR1Q15695 479 aaKnown RBP5.93□□□□□ -1.46
SRRM1-203ENST00000447431 BCORL1Q5H9F3 1711 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 CTTNBP2Q8WZ74 1663 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 PRAG1Q86YV5 1406 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 WDR33Q9C0J8 1336 aaKnown RBP5.92□□□□□ -1.46
SRRM1-203ENST00000447431 ZSCAN20P17040 1043 aaPredicted RBP5.92□□□□□ -1.46
SRRM1-203ENST00000447431 CCDC27Q2M243 656 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 NOM1Q5C9Z4 860 aaKnown RBP5.92□□□□□ -1.46
SRRM1-203ENST00000447431 KRT222Q8N1A0 295 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 GAS2L2Q8NHY3 880 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 PAXBP1Q9Y5B6 917 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 NUP160Q12769 1436 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 TROQ12816 1431 aaPredicted RBP5.92□□□□□ -1.46
SRRM1-203ENST00000447431 LMBRD1Q9NUN5 540 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 ARHGEF11O15085 1522 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 ASXL1Q8IXJ9 1541 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 TRIM66O15016 1216 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 API5Q9BZZ5 524 aaKnown RBP5.92□□□□□ -1.46
SRRM1-203ENST00000447431 DNMT1P26358 1616 aaKnown RBP5.92□□□□□ -1.46
SRRM1-203ENST00000447431 NESP48681 1621 aa5.92□□□□□ -1.46
SRRM1-203ENST00000447431 C9orf84Q5VXU9 1444 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 CCDC183Q5T5S1 534 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 TBC1D9Q6ZT07 1266 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 USP25Q9UHP3 1055 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 ADCY5O95622 1261 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 CCDC192P0DO97 292 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 NEK4P51957 841 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 NUBP1P53384 320 aa5.91□□□□□ -1.46
SRRM1-203ENST00000447431 EXOSC9Q06265 439 aaKnown RBP5.91□□□□□ -1.46
SRRM1-203ENST00000447431 KIF2AO00139 706 aaPredicted RBP5.9□□□□□ -1.46
SRRM1-203ENST00000447431 IRX3P78415 501 aaPredicted RBP5.9□□□□□ -1.46
SRRM1-203ENST00000447431 TPD52L1Q16890 204 aaPredicted RBP5.9□□□□□ -1.46
SRRM1-203ENST00000447431 ZNF592Q92610 1267 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 BCL2L12Q9HB09 334 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 RBM27Q9P2N5 1060 aaKnown RBP5.9□□□□□ -1.46
SRRM1-203ENST00000447431 NOB1Q9ULX3 412 aaKnown RBP5.9□□□□□ -1.46
SRRM1-203ENST00000447431 CDK13Q14004 1512 aaKnown RBP5.9□□□□□ -1.46
SRRM1-203ENST00000447431 GOLGA6L19H0YKK7 550 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 RLBP1P12271 317 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 TRIM27P14373 513 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 TPM4P67936 248 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 DNMBPQ6XZF7 1577 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 POLR3AO14802 1390 aaPredicted RBP5.9□□□□□ -1.46
SRRM1-203ENST00000447431 ABCC2Q92887 1545 aa5.9□□□□□ -1.46
SRRM1-203ENST00000447431 CCDC141Q6ZP82 1450 aa5.9□□□□□ -1.47
SRRM1-203ENST00000447431 KDM6BO15054 1643 aa5.9□□□□□ -1.47
SRRM1-203ENST00000447431 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.47
SRRM1-203ENST00000447431 ALDH1L2Q3SY69 923 aa5.9□□□□□ -1.47
SRRM1-203ENST00000447431 RETREG2Q8NC44 543 aa5.9□□□□□ -1.47
SRRM1-203ENST00000447431 ERC2O15083 957 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 HNRNPMP52272 730 aaKnown RBP eCLIP5.89□□□□□ -1.471e-9■■■■■ 32.3
SRRM1-203ENST00000447431 CTR9Q6PD62 1173 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 TMEM57Q8N5G2 664 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 SSUH2Q9Y2M2 353 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 KIF21AQ7Z4S6 1674 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 CLASP1Q7Z460 1538 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 CARMIL2Q6F5E8 1435 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 TTLL12Q14166 644 aaPredicted RBP5.89□□□□□ -1.47
SRRM1-203ENST00000447431 DHX8Q14562 1220 aaKnown RBP5.89□□□□□ -1.47
SRRM1-203ENST00000447431 LARP6Q9BRS8 491 aaKnown RBP5.89□□□□□ -1.47
SRRM1-203ENST00000447431 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.89□□□□□ -1.47
SRRM1-203ENST00000447431 ABCC11Q96J66 1382 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 NCOA3Q9Y6Q9 1424 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 EIF2AK4Q9P2K8 1649 aaKnown RBP5.89□□□□□ -1.47
SRRM1-203ENST00000447431 SMTNL1A8MU46 457 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 FKBP5Q13451 457 aaPredicted RBP5.89□□□□□ -1.47
SRRM1-203ENST00000447431 SYCP1Q15431 976 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 TTC12Q9H892 705 aaPredicted RBP5.89□□□□□ -1.47
SRRM1-203ENST00000447431 ADGRL2O95490 1459 aa5.89□□□□□ -1.47
SRRM1-203ENST00000447431 U2AF2P26368 475 aaKnown RBP eCLIP5.88□□□□□ -1.471e-9■■■■□ 23.1
SRRM1-203ENST00000447431 MTHFSP49914 203 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 LMOD3Q0VAK6 560 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 BMS1Q14692 1282 aaKnown RBP5.88□□□□□ -1.47
SRRM1-203ENST00000447431 FOXD4L6Q3SYB3 417 aaPredicted RBP5.88□□□□□ -1.47
SRRM1-203ENST00000447431 FOXD4L3Q6VB84 417 aaPredicted RBP5.88□□□□□ -1.47
SRRM1-203ENST00000447431 MPNDQ8N594 471 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 SSH1Q8WYL5 1049 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 TRIM5Q9C035 493 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 SAMD9Q5K651 1589 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 TOPBP1Q92547 1522 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 KIAA0586Q9BVV6 1533 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 NEMFO60524 1076 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 APPP05067 770 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 TNNT1P13805 278 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 DDIT3P35638 169 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 SPC24Q8NBT2 197 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 KANK1Q14678 1352 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 ERICH4A6NGS2 130 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 ZNF397Q8NF99 534 aaPredicted RBP5.88□□□□□ -1.47
SRRM1-203ENST00000447431 TRAIPQ9BWF2 469 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 ZBTB40Q9NUA8 1239 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 TMEM63CQ9P1W3 806 aa5.88□□□□□ -1.47
SRRM1-203ENST00000447431 BECN2A8MW95 431 aa5.87□□□□□ -1.47
SRRM1-203ENST00000447431 NOL8Q76FK4 1167 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms