RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 ABCA5Q8WWZ7 1642 aa13.36□□□□□ -0.27
SMARCE1-206ENST00000447024 H3BM21 787 aa13.36□□□□□ -0.27
SMARCE1-206ENST00000447024 CDK15Q96Q40 435 aa13.36□□□□□ -0.27
SMARCE1-206ENST00000447024 PURBQ96QR8 312 aaKnown RBP13.35□□□□□ -0.27
SMARCE1-206ENST00000447024 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
SMARCE1-206ENST00000447024 PER1O15534 1290 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-206ENST00000447024 SCARF1Q14162 830 aa13.34□□□□□ -0.27
SMARCE1-206ENST00000447024 C4orf48Q5BLP8 95 aa13.34□□□□□ -0.27
SMARCE1-206ENST00000447024 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-206ENST00000447024 CHD1O14646 1710 aa13.33□□□□□ -0.27
SMARCE1-206ENST00000447024 ARID5BQ14865 1188 aa13.33□□□□□ -0.28
SMARCE1-206ENST00000447024 LIMD1Q9UGP4 676 aa13.33□□□□□ -0.28
SMARCE1-206ENST00000447024 ERBB4Q15303 1308 aa13.33□□□□□ -0.28
SMARCE1-206ENST00000447024 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
SMARCE1-206ENST00000447024 AGERQ15109 404 aa13.31□□□□□ -0.28
SMARCE1-206ENST00000447024 QPCTQ16769 361 aa13.31□□□□□ -0.28
SMARCE1-206ENST00000447024 MYSM1Q5VVJ2 828 aa13.31□□□□□ -0.28
SMARCE1-206ENST00000447024 TSC1Q92574 1164 aa13.31□□□□□ -0.28
SMARCE1-206ENST00000447024 ERICH3Q5RHP9 1530 aa13.3□□□□□ -0.28
SMARCE1-206ENST00000447024 SOBPA7XYQ1 873 aa13.3□□□□□ -0.28
SMARCE1-206ENST00000447024 NR3C2P08235 984 aa13.3□□□□□ -0.28
SMARCE1-206ENST00000447024 LORP23490 312 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-206ENST00000447024 ZFAND3Q9H8U3 227 aa13.3□□□□□ -0.28
SMARCE1-206ENST00000447024 ZIC2O95409 532 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-206ENST00000447024 BPHLQ86WA6 291 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-206ENST00000447024 ITPKCQ96DU7 683 aa13.29□□□□□ -0.28
SMARCE1-206ENST00000447024 PDE4DQ08499 809 aa13.28□□□□□ -0.28
SMARCE1-206ENST00000447024 NR5A1Q13285 461 aa13.28□□□□□ -0.28
SMARCE1-206ENST00000447024 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 GRM5P41594 1212 aa13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 TUSC1Q2TAM9 212 aa13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 NUTM2DQ5VT03 806 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 NUTM2AQ8IVF1 878 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 ZSCAN1Q8NBB4 408 aa13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
SMARCE1-206ENST00000447024 LILRB3O75022 631 aa13.26□□□□□ -0.29
SMARCE1-206ENST00000447024 ARHGEF11O15085 1522 aa13.25□□□□□ -0.29
SMARCE1-206ENST00000447024 FAM181BA6NEQ2 426 aa13.25□□□□□ -0.29
SMARCE1-206ENST00000447024 C6orf118Q5T5N4 469 aa13.24□□□□□ -0.29
SMARCE1-206ENST00000447024 RIMBP3CA6NJZ7 1639 aa13.24□□□□□ -0.29
SMARCE1-206ENST00000447024 RIMBP3BA6NNM3 1639 aa13.24□□□□□ -0.29
SMARCE1-206ENST00000447024 RIMBP3Q9UFD9 1639 aa13.24□□□□□ -0.29
SMARCE1-206ENST00000447024 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
SMARCE1-206ENST00000447024 SH3RF1Q7Z6J0 888 aa13.23□□□□□ -0.29
SMARCE1-206ENST00000447024 ARMC2Q8NEN0 867 aa13.23□□□□□ -0.29
SMARCE1-206ENST00000447024 C1QTNF2Q9BXJ5 285 aa13.23□□□□□ -0.29
SMARCE1-206ENST00000447024 ADAMTS12P58397 1594 aa13.23□□□□□ -0.29
SMARCE1-206ENST00000447024 GRIN2AQ12879 1464 aa13.23□□□□□ -0.29
SMARCE1-206ENST00000447024 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
SMARCE1-206ENST00000447024 NBPF14Q5TI25 921 aa13.21□□□□□ -0.29
SMARCE1-206ENST00000447024 HELBQ8NG08 1087 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-206ENST00000447024 VSIG8P0DPA2 414 aa13.2□□□□□ -0.3
SMARCE1-206ENST00000447024 FSHRP23945 695 aa13.2□□□□□ -0.3
SMARCE1-206ENST00000447024 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-206ENST00000447024 NUP160Q12769 1436 aa13.2□□□□□ -0.3
SMARCE1-206ENST00000447024 MAN1A2O60476 641 aa13.19□□□□□ -0.3
SMARCE1-206ENST00000447024 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
SMARCE1-206ENST00000447024 SH3BP5LQ7L8J4 393 aa13.19□□□□□ -0.3
SMARCE1-206ENST00000447024 LINC00528Q8N1L1 170 aa13.19□□□□□ -0.3
SMARCE1-206ENST00000447024 MEIOBQ8N635 442 aa13.19□□□□□ -0.3
SMARCE1-206ENST00000447024 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
SMARCE1-206ENST00000447024 MAP4K5Q9Y4K4 846 aa13.18□□□□□ -0.3
SMARCE1-206ENST00000447024 BMP2P12643 396 aa13.17□□□□□ -0.3
SMARCE1-206ENST00000447024 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
SMARCE1-206ENST00000447024 IGF1RP08069 1367 aa13.17□□□□□ -0.3
SMARCE1-206ENST00000447024 MAGEB6P1A0A0J9YX57 407 aa13.16□□□□□ -0.3
SMARCE1-206ENST00000447024 UPP2O95045 317 aa13.16□□□□□ -0.3
SMARCE1-206ENST00000447024 VASH1Q7L8A9 365 aaPredicted RBP13.16□□□□□ -0.3
SMARCE1-206ENST00000447024 CUL7Q14999 1698 aa13.15□□□□□ -0.31
SMARCE1-206ENST00000447024 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
SMARCE1-206ENST00000447024 CEP170Q5SW79 1584 aa13.12□□□□□ -0.31
SMARCE1-206ENST00000447024 ARAP1Q96P48 1450 aa13.12□□□□□ -0.31
SMARCE1-206ENST00000447024 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
SMARCE1-206ENST00000447024 CYB5RLQ6IPT4 315 aa13.12□□□□□ -0.31
SMARCE1-206ENST00000447024 CCDC116Q8IYX3 515 aa13.12□□□□□ -0.31
SMARCE1-206ENST00000447024 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
SMARCE1-206ENST00000447024 POLR3EQ9NVU0 708 aa13.12□□□□□ -0.31
SMARCE1-206ENST00000447024 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
SMARCE1-206ENST00000447024 DNMT3LQ9UJW3 386 aa13.11□□□□□ -0.31
SMARCE1-206ENST00000447024 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
SMARCE1-206ENST00000447024 ERFEQ4G0M1 354 aa13.1□□□□□ -0.31
SMARCE1-206ENST00000447024 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
SMARCE1-206ENST00000447024 TSEN34Q9BSV6 310 aaKnown RBP13.09□□□□□ -0.31
SMARCE1-206ENST00000447024 SHROOM2Q13796 1616 aa13.09□□□□□ -0.31
SMARCE1-206ENST00000447024 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
SMARCE1-206ENST00000447024 CTDSPL2Q05D32 466 aa13.08□□□□□ -0.32
SMARCE1-206ENST00000447024 KIAA0586Q9BVV6 1533 aa13.07□□□□□ -0.32
SMARCE1-206ENST00000447024 PPP1R26Q5T8A7 1209 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-206ENST00000447024 RUSC2Q8N2Y8 1516 aa13.03□□□□□ -0.32
SMARCE1-206ENST00000447024 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
SMARCE1-206ENST00000447024 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
SMARCE1-206ENST00000447024 ARHGAP9Q9BRR9 750 aa13.03□□□□□ -0.32
SMARCE1-206ENST00000447024 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
SMARCE1-206ENST00000447024 TTLL8A6PVC2 850 aa13.02□□□□□ -0.33
SMARCE1-206ENST00000447024 CBLBQ13191 982 aa13.02□□□□□ -0.33
SMARCE1-206ENST00000447024 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.02□□□□□ -0.339e-10■□□□□ 8.6
SMARCE1-206ENST00000447024 PGPEP1Q9NXJ5 209 aa13.02□□□□□ -0.33
SMARCE1-206ENST00000447024 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-206ENST00000447024 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 254 ms