RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 AXIN2Q9Y2T1 843 aa29.28■■■□□ 2.28
APTR-205ENST00000447009 MON2Q7Z3U7 1717 aa29.28■■■□□ 2.28
APTR-205ENST00000447009 ZNF692Q9BU19 519 aaPredicted RBP29.27■■■□□ 2.28
APTR-205ENST00000447009 WDR17Q8IZU2 1322 aa29.26■■■□□ 2.27
APTR-205ENST00000447009 KTN1Q86UP2 1357 aaKnown RBP29.26■■■□□ 2.27
APTR-205ENST00000447009 TTC21AQ8NDW8 1320 aa29.25■■■□□ 2.27
APTR-205ENST00000447009 DDB1Q16531 1140 aa29.25■■■□□ 2.27
APTR-205ENST00000447009 NFAT5O94916 1531 aa29.25■■■□□ 2.27
APTR-205ENST00000447009 ARHGEF25Q86VW2 580 aa29.24■■■□□ 2.27
APTR-205ENST00000447009 KCNH5Q8NCM2 988 aa29.24■■■□□ 2.27
APTR-205ENST00000447009 NBPF14Q5TI25 921 aa29.23■■■□□ 2.27
APTR-205ENST00000447009 RGPD3A6NKT7 1758 aaPredicted RBP29.22■■■□□ 2.27
APTR-205ENST00000447009 RGPD4Q7Z3J3 1758 aa29.22■■■□□ 2.27
APTR-205ENST00000447009 CSB-PGBD3P0DP91 1061 aa29.22■■■□□ 2.27
APTR-205ENST00000447009 C11orf95C9JLR9 678 aaPredicted RBP29.21■■■□□ 2.27
APTR-205ENST00000447009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.18■■■□□ 2.263e-8■■■□□ 17.7
APTR-205ENST00000447009 CARD11Q9BXL7 1154 aa29.18■■■□□ 2.26
APTR-205ENST00000447009 SBNO2Q9Y2G9 1366 aa29.17■■■□□ 2.26
APTR-205ENST00000447009 PTF1AQ7RTS3 328 aa29.16■■■□□ 2.26
APTR-205ENST00000447009 MARCH10Q8NA82 808 aaPredicted RBP29.16■■■□□ 2.26
APTR-205ENST00000447009 USP54Q70EL1 1684 aa29.15■■■□□ 2.26
APTR-205ENST00000447009 CARD10Q9BWT7 1032 aa29.15■■■□□ 2.26
APTR-205ENST00000447009 CD163L1Q9NR16 1453 aa29.15■■■□□ 2.26
APTR-205ENST00000447009 ABCC6O95255 1503 aa29.15■■■□□ 2.26
APTR-205ENST00000447009 LTN1O94822 1766 aa29.14■■■□□ 2.26
APTR-205ENST00000447009 CDCA7Q9BWT1 371 aaPredicted RBP29.14■■■□□ 2.26
APTR-205ENST00000447009 TMC1Q8TDI8 760 aa29.13■■■□□ 2.25
APTR-205ENST00000447009 NME9Q86XW9 330 aa29.12■■■□□ 2.25
APTR-205ENST00000447009 BCL11BQ9C0K0 894 aaPredicted RBP29.12■■■□□ 2.25
APTR-205ENST00000447009 PLSCR1O15162 318 aa29.1■■■□□ 2.25
APTR-205ENST00000447009 USP31Q70CQ4 1352 aa29.1■■■□□ 2.25
APTR-205ENST00000447009 TONSLQ96HA7 1378 aa29.1■■■□□ 2.25
APTR-205ENST00000447009 CCDC7Q96M83 1385 aa29.1■■■□□ 2.25
APTR-205ENST00000447009 ANO8Q9HCE9 1232 aaPredicted RBP29.09■■■□□ 2.25
APTR-205ENST00000447009 BCL9O00512 1426 aa29.08■■■□□ 2.25
APTR-205ENST00000447009 TNS2Q63HR2 1409 aa29.08■■■□□ 2.25
APTR-205ENST00000447009 HDGFL2Q7Z4V5 671 aaPredicted RBP29.07■■■□□ 2.24
APTR-205ENST00000447009 EXOC5O00471 708 aa29.06■■■□□ 2.24
APTR-205ENST00000447009 SLC12A5Q9H2X9 1139 aa29.06■■■□□ 2.24
APTR-205ENST00000447009 SPON1Q9HCB6 807 aa29.06■■■□□ 2.24
APTR-205ENST00000447009 CASZ1Q86V15 1759 aa29.06■■■□□ 2.24
APTR-205ENST00000447009 PPP1R1BQ9UD71 204 aaPredicted RBP29.05■■■□□ 2.24
APTR-205ENST00000447009 EDC4Q6P2E9 1401 aaKnown RBP29.04■■■□□ 2.24
APTR-205ENST00000447009 ERBB3P21860 1342 aa29.04■■■□□ 2.24
APTR-205ENST00000447009 KCNQ2O43526 872 aa29.04■■■□□ 2.24
APTR-205ENST00000447009 A0A1W2PP64 1363 aa29.03■■■□□ 2.24
APTR-205ENST00000447009 NLRP2Q9NX02 1062 aa29.03■■■□□ 2.24
APTR-205ENST00000447009 NHSQ6T4R5 1651 aa29.02■■■□□ 2.24
APTR-205ENST00000447009 PROM2Q8N271 834 aa29.01■■■□□ 2.23
APTR-205ENST00000447009 TERF2IPQ9NYB0 399 aa28.99■■■□□ 2.23
APTR-205ENST00000447009 ANKRD24Q8TF21 1146 aa28.98■■■□□ 2.23
APTR-205ENST00000447009 TXNRD1Q16881 649 aa28.97■■■□□ 2.23
APTR-205ENST00000447009 ACSBG1Q96GR2 724 aa28.97■■■□□ 2.23
APTR-205ENST00000447009 PDGFDQ9GZP0 370 aaPredicted RBP28.97■■■□□ 2.23
APTR-205ENST00000447009 IL2RBP14784 551 aa28.95■■■□□ 2.22
APTR-205ENST00000447009 NINLQ9Y2I6 1382 aa28.94■■■□□ 2.22
APTR-205ENST00000447009 KAT6BQ8WYB5 2073 aa28.93■■■□□ 2.22
APTR-205ENST00000447009 BTAF1O14981 1849 aa28.93■■■□□ 2.22
APTR-205ENST00000447009 ZBTB7AO95365 584 aa28.93■■■□□ 2.22
APTR-205ENST00000447009 STK32BQ9NY57 414 aa28.93■■■□□ 2.22
APTR-205ENST00000447009 MYOM1P52179 1685 aa28.92■■■□□ 2.22
APTR-205ENST00000447009 FAM208AQ9UK61 1670 aaKnown RBP28.91■■■□□ 2.22
APTR-205ENST00000447009 ST20-MTHFSA0A0A6YYL1 179 aa28.9■■■□□ 2.22
APTR-205ENST00000447009 PUS7Q96PZ0 661 aaKnown RBP28.9■■■□□ 2.22
APTR-205ENST00000447009 TESK2Q96S53 571 aa28.9■■■□□ 2.22
APTR-205ENST00000447009 LTV1Q96GA3 475 aaPredicted RBP28.89■■■□□ 2.22
APTR-205ENST00000447009 SLC15A2Q16348 729 aa28.87■■■□□ 2.21
APTR-205ENST00000447009 IP6K1Q92551 441 aa28.86■■■□□ 2.21
APTR-205ENST00000447009 ATF5Q9Y2D1 282 aaPredicted RBP28.86■■■□□ 2.21
APTR-205ENST00000447009 PAPPAQ13219 1627 aa28.86■■■□□ 2.21
APTR-205ENST00000447009 YY1P25490 414 aa28.85■■■□□ 2.21
APTR-205ENST00000447009 RGPD2P0DJD1 1756 aa28.85■■■□□ 2.21
APTR-205ENST00000447009 COG3Q96JB2 828 aa28.84■■■□□ 2.21
APTR-205ENST00000447009 DCAF8L1A6NGE4 600 aa28.83■■■□□ 2.21
APTR-205ENST00000447009 PTGER2P43116 358 aa28.82■■■□□ 2.2
APTR-205ENST00000447009 MAP3K19Q56UN5 1328 aa28.82■■■□□ 2.2
APTR-205ENST00000447009 FBLN1P23142 703 aa28.81■■■□□ 2.2
APTR-205ENST00000447009 DDX54Q8TDD1 881 aaKnown RBP28.81■■■□□ 2.2
APTR-205ENST00000447009 ANKRD36BQ8N2N9 1353 aa28.79■■■□□ 2.2
APTR-205ENST00000447009 AMPHP49418 695 aa28.79■■■□□ 2.2
APTR-205ENST00000447009 DOT1LQ8TEK3 1739 aa28.78■■■□□ 2.2
APTR-205ENST00000447009 HOXC9P31274 260 aa28.78■■■□□ 2.2
APTR-205ENST00000447009 SHANK3Q9BYB0 1731 aa28.77■■■□□ 2.2
APTR-205ENST00000447009 MTFR1LQ9H019 292 aa28.77■■■□□ 2.2
APTR-205ENST00000447009 ZNF827Q17R98 1081 aa28.75■■■□□ 2.19
APTR-205ENST00000447009 USP47Q96K76 1375 aa28.75■■■□□ 2.19
APTR-205ENST00000447009 SLC24A1O60721 1099 aa28.74■■■□□ 2.19
APTR-205ENST00000447009 LRRC4BQ9NT99 713 aa28.74■■■□□ 2.19
APTR-205ENST00000447009 KIF20BQ96Q89 1820 aa28.73■■■□□ 2.19
APTR-205ENST00000447009 MEGF6O75095 1541 aa28.73■■■□□ 2.19
APTR-205ENST00000447009 TMF1P82094 1093 aa28.72■■■□□ 2.19
APTR-205ENST00000447009 RRS1Q15050 365 aaKnown RBP28.72■■■□□ 2.19
APTR-205ENST00000447009 FHDC1Q9C0D6 1143 aaPredicted RBP28.72■■■□□ 2.19
APTR-205ENST00000447009 SYTL4Q96C24 671 aaPredicted RBP28.71■■■□□ 2.19
APTR-205ENST00000447009 GGNBP2Q9H3C7 697 aa28.71■■■□□ 2.19
APTR-205ENST00000447009 RTL1A6NKG5 1358 aa28.71■■■□□ 2.19
APTR-205ENST00000447009 SGIP1Q9BQI5 828 aa28.7■■■□□ 2.18
APTR-205ENST00000447009 TUBGCP6Q96RT7 1819 aa28.69■■■□□ 2.18
APTR-205ENST00000447009 QSER1Q2KHR3 1735 aa28.68■■■□□ 2.18
APTR-205ENST00000447009 FYB1O15117 783 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms