RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 ZNF396Q96N95 335 aaPredicted RBP13.97□□□□□ -0.17
FN1-212ENST00000446046 CDKL5O76039 1030 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 SLF2Q8IX21 1173 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 SURF6O75683 361 aaKnown RBP13.97□□□□□ -0.17
FN1-212ENST00000446046 FILIP1LQ4L180 1135 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 CDC45O75419 566 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 KIF1BO60333 1816 aa13.97□□□□□ -0.17
FN1-212ENST00000446046 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
FN1-212ENST00000446046 CFAP74Q9C0B2 1584 aa13.96□□□□□ -0.17
FN1-212ENST00000446046 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
FN1-212ENST00000446046 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.18
FN1-212ENST00000446046 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.18
FN1-212ENST00000446046 HSP90AB3PQ58FF7 597 aa13.96□□□□□ -0.18
FN1-212ENST00000446046 CCDC61Q9Y6R9 512 aa13.96□□□□□ -0.18
FN1-212ENST00000446046 AMER1Q5JTC6 1135 aaPredicted RBP13.95□□□□□ -0.18
FN1-212ENST00000446046 GCC1Q96CN9 775 aa13.95□□□□□ -0.18
FN1-212ENST00000446046 KINO60870 393 aaKnown RBP13.95□□□□□ -0.18
FN1-212ENST00000446046 FAM177BA6PVY3 158 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 PRKAR2BP31323 418 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 SOGA3Q5TF21 947 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 CTNNA3Q9UI47 895 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 TNIP1Q15025 636 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 CCDC69A6NI79 296 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 SDF4Q9BRK5 362 aa13.94□□□□□ -0.18
FN1-212ENST00000446046 SULT6B1Q6IMI4 303 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 DEKP35659 375 aaKnown RBP13.93□□□□□ -0.18
FN1-212ENST00000446046 TWISTNBQ3B726 338 aaPredicted RBP13.93□□□□□ -0.18
FN1-212ENST00000446046 ZSCAN29Q8IWY8 852 aaPredicted RBP13.93□□□□□ -0.18
FN1-212ENST00000446046 TMOD3Q9NYL9 352 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 AKAP2Q9Y2D5 859 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 TEX35Q5T0J7 233 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 CFAP70Q5T0N1 1121 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 ARHGEF11O15085 1522 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 CCP110O43303 1012 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 GNAT3A8MTJ3 354 aa13.93□□□□□ -0.18
FN1-212ENST00000446046 FOXD4L6Q3SYB3 417 aaPredicted RBP13.93□□□□□ -0.18
FN1-212ENST00000446046 FOXD4L3Q6VB84 417 aaPredicted RBP13.93□□□□□ -0.18
FN1-212ENST00000446046 RRP12Q5JTH9 1297 aaKnown RBP13.93□□□□□ -0.18
FN1-212ENST00000446046 PLB1Q6P1J6 1458 aa13.92□□□□□ -0.18
FN1-212ENST00000446046 DNAJC2Q99543 621 aaKnown RBP13.92□□□□□ -0.18
FN1-212ENST00000446046 DACH1Q9UI36 760 aa13.92□□□□□ -0.18
FN1-212ENST00000446046 EIF2AK4Q9P2K8 1649 aaKnown RBP13.92□□□□□ -0.18
FN1-212ENST00000446046 WDR63Q8IWG1 891 aa13.92□□□□□ -0.18
FN1-212ENST00000446046 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
FN1-212ENST00000446046 ZRSR2Q15696 482 aaKnown RBP13.92□□□□□ -0.18
FN1-212ENST00000446046 LNPKQ9C0E8 428 aa13.92□□□□□ -0.18
FN1-212ENST00000446046 CAVIN4Q5BKX8 364 aa13.92□□□□□ -0.18
FN1-212ENST00000446046 BMP2KQ9NSY1 1161 aaPredicted RBP13.91□□□□□ -0.18
FN1-212ENST00000446046 RAPGEF3O95398 923 aa13.91□□□□□ -0.18
FN1-212ENST00000446046 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
FN1-212ENST00000446046 NOL7Q9UMY1 257 aaKnown RBP13.91□□□□□ -0.18
FN1-212ENST00000446046 DENND4BO75064 1496 aaPredicted RBP13.91□□□□□ -0.18
FN1-212ENST00000446046 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
FN1-212ENST00000446046 CABP1Q9NZU7 370 aa13.91□□□□□ -0.18
FN1-212ENST00000446046 MYL6BP14649 208 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 MSH6P52701 1360 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 PDE4AP27815 886 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 WASF1Q92558 559 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 ZNHIT6Q9NWK9 470 aaKnown RBP13.9□□□□□ -0.18
FN1-212ENST00000446046 SLC4A3P48751 1232 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 KRT32Q14532 448 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
FN1-212ENST00000446046 CDK13Q14004 1512 aaKnown RBP13.9□□□□□ -0.18
FN1-212ENST00000446046 MYO5CQ9NQX4 1742 aa13.9□□□□□ -0.19
FN1-212ENST00000446046 CADPS2Q86UW7 1296 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.89□□□□□ -0.19
FN1-212ENST00000446046 NGLY1Q96IV0 654 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 RPGRQ92834 1020 aaKnown RBP13.89□□□□□ -0.19
FN1-212ENST00000446046 ARGLU1Q9NWB6 273 aaPredicted RBP13.89□□□□□ -0.19
FN1-212ENST00000446046 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
FN1-212ENST00000446046 ERLIN2O94905 339 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 LRP2BPQ9P2M1 347 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 FANCAO15360 1455 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 TDO2P48775 406 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 SLC26A8Q96RN1 970 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
FN1-212ENST00000446046 TEX13AQ9BXU3 409 aaPredicted RBP13.88□□□□□ -0.19
FN1-212ENST00000446046 AEBP1Q8IUX7 1158 aa13.88□□□□□ -0.19
FN1-212ENST00000446046 TCP11L2Q8N4U5 519 aa13.88□□□□□ -0.19
FN1-212ENST00000446046 UBAC1Q9BSL1 405 aa13.88□□□□□ -0.19
FN1-212ENST00000446046 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
FN1-212ENST00000446046 MPHOSPH6Q99547 160 aaKnown RBP13.88□□□□□ -0.19
FN1-212ENST00000446046 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
FN1-212ENST00000446046 PPP4R3AQ6IN85 833 aa13.88□□□□□ -0.19
FN1-212ENST00000446046 PDE3AQ14432 1141 aa13.88□□□□□ -0.19
FN1-212ENST00000446046 FCHSD2O94868 740 aa13.87□□□□□ -0.19
FN1-212ENST00000446046 DCTN1Q14203 1278 aa13.87□□□□□ -0.19
FN1-212ENST00000446046 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
FN1-212ENST00000446046 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
FN1-212ENST00000446046 EHMT1Q9H9B1 1298 aa13.87□□□□□ -0.19
FN1-212ENST00000446046 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
FN1-212ENST00000446046 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
FN1-212ENST00000446046 AK9Q5TCS8 1911 aa13.87□□□□□ -0.19
FN1-212ENST00000446046 ZNF76P36508 570 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms