RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 FOXD4L6Q3SYB3 417 aaPredicted RBP17.15■□□□□ 0.34
VPS52-212ENST00000445902 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
VPS52-212ENST00000445902 FOXD4L3Q6VB84 417 aaPredicted RBP17.15■□□□□ 0.34
VPS52-212ENST00000445902 KIF1BO60333 1816 aa17.15■□□□□ 0.34
VPS52-212ENST00000445902 MROH2AA6NES4 1674 aa17.15■□□□□ 0.34
VPS52-212ENST00000445902 SBNO2Q9Y2G9 1366 aa17.14■□□□□ 0.34
VPS52-212ENST00000445902 TET3O43151 1660 aa17.14■□□□□ 0.33
VPS52-212ENST00000445902 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
VPS52-212ENST00000445902 MYO3AQ8NEV4 1616 aa17.14■□□□□ 0.33
VPS52-212ENST00000445902 ZNF830Q96NB3 372 aaPredicted RBP17.14■□□□□ 0.33
VPS52-212ENST00000445902 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
VPS52-212ENST00000445902 MYOM2P54296 1465 aa17.13■□□□□ 0.33
VPS52-212ENST00000445902 PPRC1Q5VV67 1664 aaKnown RBP17.13■□□□□ 0.33
VPS52-212ENST00000445902 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
VPS52-212ENST00000445902 OTUD7AQ8TE49 926 aaPredicted RBP17.13■□□□□ 0.33
VPS52-212ENST00000445902 USP26Q9BXU7 913 aa17.13■□□□□ 0.33
VPS52-212ENST00000445902 PLEKHM2Q8IWE5 1019 aa17.13■□□□□ 0.33
VPS52-212ENST00000445902 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.13■□□□□ 0.334e-11■■□□□ 12.7
VPS52-212ENST00000445902 MTERF4Q7Z6M4 381 aaKnown RBP17.12■□□□□ 0.33
VPS52-212ENST00000445902 C17orf53Q8N3J3 647 aaPredicted RBP17.12■□□□□ 0.33
VPS52-212ENST00000445902 ALDH1L2Q3SY69 923 aa17.11■□□□□ 0.33
VPS52-212ENST00000445902 ARHGAP31Q2M1Z3 1444 aa17.11■□□□□ 0.33
VPS52-212ENST00000445902 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
VPS52-212ENST00000445902 ABCC1P33527 1531 aa17.11■□□□□ 0.33
VPS52-212ENST00000445902 CBX1P83916 185 aa17.1■□□□□ 0.33
VPS52-212ENST00000445902 NOL8Q76FK4 1167 aaKnown RBP17.1■□□□□ 0.33
VPS52-212ENST00000445902 ZC3H13Q5T200 1668 aaKnown RBP17.1■□□□□ 0.33
VPS52-212ENST00000445902 MED14O60244 1454 aa17.1■□□□□ 0.33
VPS52-212ENST00000445902 KIAA2012Q0VF49 1180 aa17.1■□□□□ 0.33
VPS52-212ENST00000445902 MCM5P33992 734 aa17.1■□□□□ 0.33
VPS52-212ENST00000445902 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
VPS52-212ENST00000445902 PLCH2O75038 1416 aa17.09■□□□□ 0.33
VPS52-212ENST00000445902 IL16Q14005 1332 aa17.09■□□□□ 0.33
VPS52-212ENST00000445902 ST18O60284 1047 aa17.09■□□□□ 0.33
VPS52-212ENST00000445902 IFT172Q9UG01 1749 aa17.09■□□□□ 0.33
VPS52-212ENST00000445902 TTC22Q5TAA0 569 aa17.09■□□□□ 0.33
VPS52-212ENST00000445902 USP32Q8NFA0 1604 aa17.09■□□□□ 0.33
VPS52-212ENST00000445902 SMARCA5O60264 1052 aaPredicted RBP17.08■□□□□ 0.33
VPS52-212ENST00000445902 FBLN1P23142 703 aa17.08■□□□□ 0.33
VPS52-212ENST00000445902 MRPL50Q8N5N7 158 aaKnown RBP17.08■□□□□ 0.33
VPS52-212ENST00000445902 CWC22Q9HCG8 908 aaKnown RBP17.08■□□□□ 0.32
VPS52-212ENST00000445902 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.32
VPS52-212ENST00000445902 GDPD2Q9HCC8 539 aa17.07■□□□□ 0.32
VPS52-212ENST00000445902 ZFYVE16Q7Z3T8 1539 aa17.07■□□□□ 0.32
VPS52-212ENST00000445902 VAMP4O75379 141 aa17.07■□□□□ 0.32
VPS52-212ENST00000445902 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
VPS52-212ENST00000445902 ZNF710Q8N1W2 664 aa17.07■□□□□ 0.32
VPS52-212ENST00000445902 ZSCAN20P17040 1043 aaPredicted RBP17.06■□□□□ 0.32
VPS52-212ENST00000445902 TSPY26PQ9H489 355 aa17.06■□□□□ 0.32
VPS52-212ENST00000445902 DEPDC5O75140 1603 aa17.06■□□□□ 0.32
VPS52-212ENST00000445902 DIAPH1O60610 1272 aaKnown RBP17.06■□□□□ 0.32
VPS52-212ENST00000445902 SDSP20132 328 aa17.06■□□□□ 0.32
VPS52-212ENST00000445902 DMTNQ08495 405 aa17.06■□□□□ 0.32
VPS52-212ENST00000445902 MYRIPQ8NFW9 859 aa17.06■□□□□ 0.32
VPS52-212ENST00000445902 EVC2Q86UK5 1308 aa17.06■□□□□ 0.32
VPS52-212ENST00000445902 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
VPS52-212ENST00000445902 PRKAR2BP31323 418 aa17.05■□□□□ 0.32
VPS52-212ENST00000445902 HMOX1P09601 288 aa17.05■□□□□ 0.32
VPS52-212ENST00000445902 TTC12Q9H892 705 aaPredicted RBP17.05■□□□□ 0.32
VPS52-212ENST00000445902 A0A1W2PP64 1363 aa17.04■□□□□ 0.32
VPS52-212ENST00000445902 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
VPS52-212ENST00000445902 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
VPS52-212ENST00000445902 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
VPS52-212ENST00000445902 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
VPS52-212ENST00000445902 NSD2O96028 1365 aa17.03■□□□□ 0.32
VPS52-212ENST00000445902 TCHHQ07283 1943 aa17.03■□□□□ 0.32
VPS52-212ENST00000445902 NEK4P51957 841 aa17.03■□□□□ 0.32
VPS52-212ENST00000445902 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
VPS52-212ENST00000445902 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
VPS52-212ENST00000445902 STK26Q9P289 416 aa17.03■□□□□ 0.32
VPS52-212ENST00000445902 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
VPS52-212ENST00000445902 TULP4Q9NRJ4 1543 aa17.02■□□□□ 0.32
VPS52-212ENST00000445902 SPDYE4A6NLX3 237 aa17.02■□□□□ 0.32
VPS52-212ENST00000445902 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.32
VPS52-212ENST00000445902 ATP2B3Q16720 1220 aa17.02■□□□□ 0.32
VPS52-212ENST00000445902 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
VPS52-212ENST00000445902 MBD3O95983 291 aa17.02■□□□□ 0.31
VPS52-212ENST00000445902 ABCC4O15439 1325 aa17.02■□□□□ 0.31
VPS52-212ENST00000445902 NRXN1Q9ULB1 1477 aa17.02■□□□□ 0.31
VPS52-212ENST00000445902 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
VPS52-212ENST00000445902 FYB1O15117 783 aa17.01■□□□□ 0.31
VPS52-212ENST00000445902 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
VPS52-212ENST00000445902 NOLC1Q14978 699 aaKnown RBP eCLIP17.01■□□□□ 0.31
VPS52-212ENST00000445902 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
VPS52-212ENST00000445902 IGSF3O75054 1194 aa17.01■□□□□ 0.31
VPS52-212ENST00000445902 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
VPS52-212ENST00000445902 PTCH1Q13635 1447 aa17■□□□□ 0.31
VPS52-212ENST00000445902 SETBP1Q9Y6X0 1596 aa17■□□□□ 0.31
VPS52-212ENST00000445902 TWISTNBQ3B726 338 aaPredicted RBP17■□□□□ 0.31
VPS52-212ENST00000445902 MBIPQ9NS73 344 aa17■□□□□ 0.31
VPS52-212ENST00000445902 ADGRB1O14514 1584 aa17■□□□□ 0.31
VPS52-212ENST00000445902 LRRC7Q96NW7 1537 aa16.99■□□□□ 0.31
VPS52-212ENST00000445902 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
VPS52-212ENST00000445902 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
VPS52-212ENST00000445902 ARHGAP45Q92619 1136 aa16.99■□□□□ 0.31
VPS52-212ENST00000445902 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
VPS52-212ENST00000445902 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
VPS52-212ENST00000445902 UTP14CQ5TAP6 766 aaKnown RBP16.98■□□□□ 0.31
VPS52-212ENST00000445902 TSHZ3Q63HK5 1081 aa16.98■□□□□ 0.31
VPS52-212ENST00000445902 PIBF1Q8WXW3 757 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms