RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 RGPD3A6NKT7 1758 aaPredicted RBP34.27■■■■□ 3.08
NUP50-211ENST00000445721 RGPD4Q7Z3J3 1758 aa34.27■■■■□ 3.08
NUP50-211ENST00000445721 PROM2Q8N271 834 aa34.27■■■■□ 3.08
NUP50-211ENST00000445721 SLIT3O75094 1523 aa34.26■■■■□ 3.08
NUP50-211ENST00000445721 WDR17Q8IZU2 1322 aa34.26■■■■□ 3.07
NUP50-211ENST00000445721 ZBTB7AO95365 584 aa34.25■■■■□ 3.07
NUP50-211ENST00000445721 CDCA7Q9BWT1 371 aaPredicted RBP34.24■■■■□ 3.07
NUP50-211ENST00000445721 COL18A1P39060 1754 aa34.21■■■■□ 3.07
NUP50-211ENST00000445721 CASZ1Q86V15 1759 aa34.21■■■■□ 3.07
NUP50-211ENST00000445721 CSB-PGBD3P0DP91 1061 aa34.2■■■■□ 3.07
NUP50-211ENST00000445721 ATF5Q9Y2D1 282 aaPredicted RBP34.2■■■■□ 3.07
NUP50-211ENST00000445721 ARHGEF25Q86VW2 580 aa34.19■■■■□ 3.06
NUP50-211ENST00000445721 QRICH2Q9H0J4 1663 aa34.19■■■■□ 3.06
NUP50-211ENST00000445721 SOX12O15370 315 aa34.18■■■■□ 3.06
NUP50-211ENST00000445721 BCL9O00512 1426 aa34.17■■■■□ 3.06
NUP50-211ENST00000445721 PTGER2P43116 358 aa34.17■■■■□ 3.06
NUP50-211ENST00000445721 CPSF1Q10570 1443 aaKnown RBP34.17■■■■□ 3.06
NUP50-211ENST00000445721 TXNRD1Q16881 649 aa34.17■■■■□ 3.06
NUP50-211ENST00000445721 CARD10Q9BWT7 1032 aa34.17■■■■□ 3.06
NUP50-211ENST00000445721 STK32BQ9NY57 414 aa34.17■■■■□ 3.06
NUP50-211ENST00000445721 PIK3C2AO00443 1686 aa34.16■■■■□ 3.06
NUP50-211ENST00000445721 EVC2Q86UK5 1308 aa34.15■■■■□ 3.06
NUP50-211ENST00000445721 EXOC5O00471 708 aa34.15■■■■□ 3.06
NUP50-211ENST00000445721 KCNH5Q8NCM2 988 aa34.15■■■■□ 3.06
NUP50-211ENST00000445721 TTC21BQ7Z4L5 1316 aa34.14■■■■□ 3.06
NUP50-211ENST00000445721 WNK3Q9BYP7 1800 aa34.13■■■■□ 3.05
NUP50-211ENST00000445721 SLC15A2Q16348 729 aa34.12■■■■□ 3.05
NUP50-211ENST00000445721 ZNF692Q9BU19 519 aaPredicted RBP34.12■■■■□ 3.05
NUP50-211ENST00000445721 AKAP12Q02952 1782 aa34.12■■■■□ 3.05
NUP50-211ENST00000445721 MYOM1P52179 1685 aa34.09■■■■□ 3.05
NUP50-211ENST00000445721 RGPD5Q99666 1765 aa34.08■■■■□ 3.05
NUP50-211ENST00000445721 FHDC1Q9C0D6 1143 aaPredicted RBP34.08■■■■□ 3.05
NUP50-211ENST00000445721 SYT17Q9BSW7 474 aa34.07■■■■□ 3.04
NUP50-211ENST00000445721 ZNF784Q8NCA9 323 aaPredicted RBP34.06■■■■□ 3.04
NUP50-211ENST00000445721 MTFR1LQ9H019 292 aa34.05■■■■□ 3.04
NUP50-211ENST00000445721 TTC21AQ8NDW8 1320 aa34.04■■■■□ 3.04
NUP50-211ENST00000445721 CCDC7Q96M83 1385 aa34.04■■■■□ 3.04
NUP50-211ENST00000445721 L3MBTL2Q969R5 705 aa34.02■■■■□ 3.04
NUP50-211ENST00000445721 ACSBG1Q96GR2 724 aa34.01■■■■□ 3.03
NUP50-211ENST00000445721 TRPM1Q7Z4N2 1603 aa34■■■■□ 3.03
NUP50-211ENST00000445721 UTRNP46939 3433 aa34■■■■□ 3.03
NUP50-211ENST00000445721 TNS2Q63HR2 1409 aa33.99■■■■□ 3.03
NUP50-211ENST00000445721 SGIP1Q9BQI5 828 aa33.99■■■■□ 3.03
NUP50-211ENST00000445721 NFAT5O94916 1531 aa33.98■■■■□ 3.03
NUP50-211ENST00000445721 KTN1Q86UP2 1357 aaKnown RBP33.98■■■■□ 3.03
NUP50-211ENST00000445721 NLRP2Q9NX02 1062 aa33.96■■■■□ 3.03
NUP50-211ENST00000445721 ARXQ96QS3 562 aa33.95■■■■□ 3.03
NUP50-211ENST00000445721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.93■■■■□ 3.02
NUP50-211ENST00000445721 ROCK2O75116 1388 aaKnown RBP33.91■■■■□ 3.02
NUP50-211ENST00000445721 NHSQ6T4R5 1651 aa33.9■■■■□ 3.02
NUP50-211ENST00000445721 IL2RBP14784 551 aa33.9■■■■□ 3.02
NUP50-211ENST00000445721 ABCC6O95255 1503 aa33.89■■■■□ 3.02
NUP50-211ENST00000445721 ERBB3P21860 1342 aa33.89■■■■□ 3.02
NUP50-211ENST00000445721 KAT6BQ8WYB5 2073 aa33.89■■■■□ 3.02
NUP50-211ENST00000445721 ZNF827Q17R98 1081 aa33.86■■■■□ 3.01
NUP50-211ENST00000445721 CHD4Q14839 1912 aa33.85■■■■□ 3.01
NUP50-211ENST00000445721 NME9Q86XW9 330 aa33.85■■■■□ 3.01
NUP50-211ENST00000445721 USP31Q70CQ4 1352 aa33.85■■■■□ 3.01
NUP50-211ENST00000445721 SIN3AQ96ST3 1273 aa33.84■■■■□ 3.01
NUP50-211ENST00000445721 LRRC4BQ9NT99 713 aa33.84■■■■□ 3.01
NUP50-211ENST00000445721 ANKRD24Q8TF21 1146 aa33.83■■■■□ 3.01
NUP50-211ENST00000445721 SENP3-EIF4A1A0A087X0R7 540 aa33.82■■■■□ 3
NUP50-211ENST00000445721 MAP3K5Q99683 1374 aa33.82■■■■□ 3
NUP50-211ENST00000445721 PAPPAQ13219 1627 aa33.82■■■■□ 3
NUP50-211ENST00000445721 BTAF1O14981 1849 aa33.81■■■■□ 3
NUP50-211ENST00000445721 C1QTNF8P60827 252 aa33.8■■■■□ 3
NUP50-211ENST00000445721 GPR162Q16538 588 aa33.8■■■■□ 3
NUP50-211ENST00000445721 NEUROD1Q13562 356 aa33.79■■■■□ 3
NUP50-211ENST00000445721 MON2Q7Z3U7 1717 aa33.79■■■■□ 3
NUP50-211ENST00000445721 KLHL34Q8N239 644 aa33.77■■■■□ 3
NUP50-211ENST00000445721 TMC1Q8TDI8 760 aa33.77■■■■□ 3
NUP50-211ENST00000445721 SBNO2Q9Y2G9 1366 aa33.76■■■■□ 3
NUP50-211ENST00000445721 DDX54Q8TDD1 881 aaKnown RBP33.75■■■□□ 2.99
NUP50-211ENST00000445721 AKT1S1Q96B36 256 aa33.75■■■□□ 2.99
NUP50-211ENST00000445721 HDGFL2Q7Z4V5 671 aaPredicted RBP33.74■■■□□ 2.99
NUP50-211ENST00000445721 SLC16A10Q8TF71 515 aa33.74■■■□□ 2.99
NUP50-211ENST00000445721 LTN1O94822 1766 aa33.74■■■□□ 2.99
NUP50-211ENST00000445721 CD163L1Q9NR16 1453 aa33.72■■■□□ 2.99
NUP50-211ENST00000445721 POLD1P28340 1107 aa33.72■■■□□ 2.99
NUP50-211ENST00000445721 SLC27A3Q5K4L6 730 aa33.72■■■□□ 2.99
NUP50-211ENST00000445721 PELP1Q8IZL8 1130 aaKnown RBP33.71■■■□□ 2.99
NUP50-211ENST00000445721 SLC12A5Q9H2X9 1139 aa33.71■■■□□ 2.99
NUP50-211ENST00000445721 USP54Q70EL1 1684 aa33.7■■■□□ 2.99
NUP50-211ENST00000445721 LTV1Q96GA3 475 aaPredicted RBP33.69■■■□□ 2.98
NUP50-211ENST00000445721 KCNQ4P56696 695 aa33.68■■■□□ 2.98
NUP50-211ENST00000445721 TFCP2L1Q9NZI6 479 aa33.68■■■□□ 2.98
NUP50-211ENST00000445721 SYTL4Q96C24 671 aaPredicted RBP33.67■■■□□ 2.98
NUP50-211ENST00000445721 PNPLA7Q6ZV29 1317 aa33.67■■■□□ 2.98
NUP50-211ENST00000445721 EDC4Q6P2E9 1401 aaKnown RBP33.66■■■□□ 2.98
NUP50-211ENST00000445721 IP6K1Q92551 441 aa33.66■■■□□ 2.98
NUP50-211ENST00000445721 TERF2IPQ9NYB0 399 aa33.65■■■□□ 2.98
NUP50-211ENST00000445721 PRIM1P49642 420 aaKnown RBP33.64■■■□□ 2.98
NUP50-211ENST00000445721 CARD11Q9BXL7 1154 aa33.64■■■□□ 2.98
NUP50-211ENST00000445721 GOLGB1Q14789 3259 aaKnown RBP33.63■■■□□ 2.97
NUP50-211ENST00000445721 GIGYF1O75420 1035 aaPredicted RBP33.61■■■□□ 2.97
NUP50-211ENST00000445721 NLGN2Q8NFZ4 835 aa33.61■■■□□ 2.97
NUP50-211ENST00000445721 A0A1W2PP64 1363 aa33.6■■■□□ 2.97
NUP50-211ENST00000445721 QSER1Q2KHR3 1735 aa33.59■■■□□ 2.97
NUP50-211ENST00000445721 ANKRD36BQ8N2N9 1353 aa33.57■■■□□ 2.96
NUP50-211ENST00000445721 MSH5O43196 834 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms