RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 TCP11L2Q8N4U5 519 aa31.15■■■□□ 2.58
LMBR1-211ENST00000444719 CDCA8Q53HL2 280 aa31.14■■■□□ 2.58
LMBR1-211ENST00000444719 BARGINQ6ZT62 677 aa31.13■■■□□ 2.57
LMBR1-211ENST00000444719 ANKRD36BQ8N2N9 1353 aa31.12■■■□□ 2.57
LMBR1-211ENST00000444719 CRB1P82279 1406 aa31.12■■■□□ 2.57
LMBR1-211ENST00000444719 LTN1O94822 1766 aa31.12■■■□□ 2.57
LMBR1-211ENST00000444719 TOM1L2Q6ZVM7 507 aa31.11■■■□□ 2.57
LMBR1-211ENST00000444719 BLMP54132 1417 aaPredicted RBP31.1■■■□□ 2.57
LMBR1-211ENST00000444719 THRAP3Q9Y2W1 955 aaKnown RBP31.09■■■□□ 2.57
LMBR1-211ENST00000444719 OVOS2A0A0J9YW53 1432 aa31.07■■■□□ 2.57
LMBR1-211ENST00000444719 OVOS2Q6IE36 1432 aa31.07■■■□□ 2.57
LMBR1-211ENST00000444719 CSB-PGBD3P0DP91 1061 aa31.07■■■□□ 2.56
LMBR1-211ENST00000444719 SF3B2Q13435 895 aaKnown RBP31.07■■■□□ 2.56
LMBR1-211ENST00000444719 WDR17Q8IZU2 1322 aa31.06■■■□□ 2.56
LMBR1-211ENST00000444719 EIF4G2P78344 907 aaKnown RBP eCLIP31.06■■■□□ 2.56
LMBR1-211ENST00000444719 HSPA5P11021 654 aaKnown RBP31.05■■■□□ 2.56
LMBR1-211ENST00000444719 PDE3BQ13370 1112 aa31.05■■■□□ 2.56
LMBR1-211ENST00000444719 DEFB132Q7Z7B7 95 aa31.05■■■□□ 2.56
LMBR1-211ENST00000444719 POLR3GLQ9BT43 218 aa31.05■■■□□ 2.56
LMBR1-211ENST00000444719 MYOM1P52179 1685 aa31.05■■■□□ 2.56
LMBR1-211ENST00000444719 COG3Q96JB2 828 aa31.04■■■□□ 2.56
LMBR1-211ENST00000444719 PARP4Q9UKK3 1724 aaKnown RBP31.01■■■□□ 2.55
LMBR1-211ENST00000444719 FBLN1P23142 703 aa31■■■□□ 2.55
LMBR1-211ENST00000444719 GGNBP2Q9H3C7 697 aa31■■■□□ 2.55
LMBR1-211ENST00000444719 ABCC6O95255 1503 aa30.99■■■□□ 2.55
LMBR1-211ENST00000444719 FYB1O15117 783 aa30.99■■■□□ 2.55
LMBR1-211ENST00000444719 FAM196AQ6ZSG2 479 aa30.98■■■□□ 2.55
LMBR1-211ENST00000444719 CARD10Q9BWT7 1032 aa30.98■■■□□ 2.55
LMBR1-211ENST00000444719 WNK3Q9BYP7 1800 aa30.98■■■□□ 2.55
LMBR1-211ENST00000444719 KIF20BQ96Q89 1820 aa30.97■■■□□ 2.55
LMBR1-211ENST00000444719 CARD14Q9BXL6 1004 aa30.97■■■□□ 2.55
LMBR1-211ENST00000444719 RGPD1P0DJD0 1748 aa30.97■■■□□ 2.55
LMBR1-211ENST00000444719 TRIM37O94972 964 aa30.94■■■□□ 2.54
LMBR1-211ENST00000444719 ANKRD24Q8TF21 1146 aa30.94■■■□□ 2.54
LMBR1-211ENST00000444719 NLRP2Q9NX02 1062 aa30.93■■■□□ 2.54
LMBR1-211ENST00000444719 LRRC37A3O60309 1634 aa30.93■■■□□ 2.54
LMBR1-211ENST00000444719 ERBB3P21860 1342 aa30.93■■■□□ 2.54
LMBR1-211ENST00000444719 NSD3Q9BZ95 1437 aa30.92■■■□□ 2.54
LMBR1-211ENST00000444719 BAG6P46379 1132 aa30.92■■■□□ 2.54
LMBR1-211ENST00000444719 DDB1Q16531 1140 aa30.92■■■□□ 2.54
LMBR1-211ENST00000444719 IP6K1Q92551 441 aa30.92■■■□□ 2.54
LMBR1-211ENST00000444719 TNS1Q9HBL0 1735 aaKnown RBP30.92■■■□□ 2.54
LMBR1-211ENST00000444719 MAP3K19Q56UN5 1328 aa30.92■■■□□ 2.54
LMBR1-211ENST00000444719 AMPHP49418 695 aa30.9■■■□□ 2.54
LMBR1-211ENST00000444719 LTV1Q96GA3 475 aaPredicted RBP30.9■■■□□ 2.54
LMBR1-211ENST00000444719 EN1Q05925 392 aaPredicted RBP30.89■■■□□ 2.54
LMBR1-211ENST00000444719 RRS1Q15050 365 aaKnown RBP30.88■■■□□ 2.53
LMBR1-211ENST00000444719 CDCA7Q9BWT1 371 aaPredicted RBP30.88■■■□□ 2.53
LMBR1-211ENST00000444719 CCDC7Q96M83 1385 aa30.88■■■□□ 2.53
LMBR1-211ENST00000444719 DISP2A7MBM2 1401 aa30.85■■■□□ 2.53
LMBR1-211ENST00000444719 C11orf95C9JLR9 678 aaPredicted RBP30.85■■■□□ 2.53
LMBR1-211ENST00000444719 HOXC9P31274 260 aa30.85■■■□□ 2.53
LMBR1-211ENST00000444719 EXOC5O00471 708 aa30.83■■■□□ 2.53
LMBR1-211ENST00000444719 APBA3O96018 575 aa30.83■■■□□ 2.53
LMBR1-211ENST00000444719 RGPD2P0DJD1 1756 aa30.83■■■□□ 2.53
LMBR1-211ENST00000444719 PEAK1Q9H792 1746 aa30.83■■■□□ 2.53
LMBR1-211ENST00000444719 MARCH10Q8NA82 808 aaPredicted RBP30.82■■■□□ 2.52
LMBR1-211ENST00000444719 SBF2Q86WG5 1849 aa30.82■■■□□ 2.52
LMBR1-211ENST00000444719 OVOS2A0A0G2JMS6 1433 aa30.81■■■□□ 2.52
LMBR1-211ENST00000444719 FAM208AQ9UK61 1670 aaKnown RBP30.79■■■□□ 2.52
LMBR1-211ENST00000444719 EZH2Q15910 746 aaKnown RBP30.79■■■□□ 2.52
LMBR1-211ENST00000444719 CGNL1Q0VF96 1302 aa30.78■■■□□ 2.52
LMBR1-211ENST00000444719 IL2RBP14784 551 aa30.78■■■□□ 2.52
LMBR1-211ENST00000444719 PANK3Q9H999 370 aa30.78■■■□□ 2.52
LMBR1-211ENST00000444719 RTL1A6NKG5 1358 aa30.75■■■□□ 2.51
LMBR1-211ENST00000444719 MAP2P11137 1827 aaKnown RBP30.75■■■□□ 2.51
LMBR1-211ENST00000444719 CAMKK2Q96RR4 588 aa30.74■■■□□ 2.51
LMBR1-211ENST00000444719 TNS2Q63HR2 1409 aa30.73■■■□□ 2.51
LMBR1-211ENST00000444719 HSP90AB2PQ58FF8 381 aa30.72■■■□□ 2.51
LMBR1-211ENST00000444719 PTF1AQ7RTS3 328 aa30.72■■■□□ 2.51
LMBR1-211ENST00000444719 EMILIN1Q9Y6C2 1016 aa30.72■■■□□ 2.51
LMBR1-211ENST00000444719 KAT6BQ8WYB5 2073 aa30.71■■■□□ 2.51
LMBR1-211ENST00000444719 PPM1GO15355 546 aaPredicted RBP30.7■■■□□ 2.51
LMBR1-211ENST00000444719 ANKRD26Q9UPS8 1709 aa30.7■■■□□ 2.5
LMBR1-211ENST00000444719 FLT4P35916 1363 aa30.68■■■□□ 2.5
LMBR1-211ENST00000444719 PSDA5PKW4 1024 aaPredicted RBP30.68■■■□□ 2.5
LMBR1-211ENST00000444719 TNNT2P45379 298 aaPredicted RBP30.68■■■□□ 2.5
LMBR1-211ENST00000444719 NBPF6Q5VWK0 638 aa30.68■■■□□ 2.5
LMBR1-211ENST00000444719 NBPF4Q96M43 638 aa30.68■■■□□ 2.5
LMBR1-211ENST00000444719 USHBP1Q8N6Y0 703 aa30.67■■■□□ 2.5
LMBR1-211ENST00000444719 KIF7Q2M1P5 1343 aa30.67■■■□□ 2.5
LMBR1-211ENST00000444719 INSRP06213 1382 aa30.66■■■□□ 2.5
LMBR1-211ENST00000444719 BCL11BQ9C0K0 894 aaPredicted RBP30.66■■■□□ 2.5
LMBR1-211ENST00000444719 SMG6Q86US8 1419 aaKnown RBP30.65■■■□□ 2.5
LMBR1-211ENST00000444719 BCL9O00512 1426 aa30.64■■■□□ 2.5
LMBR1-211ENST00000444719 DDX54Q8TDD1 881 aaKnown RBP30.64■■■□□ 2.5
LMBR1-211ENST00000444719 KIF24Q5T7B8 1368 aa30.64■■■□□ 2.5
LMBR1-211ENST00000444719 RREB1Q92766 1687 aa30.63■■■□□ 2.49
LMBR1-211ENST00000444719 ACSBG1Q96GR2 724 aa30.63■■■□□ 2.49
LMBR1-211ENST00000444719 PARD3Q8TEW0 1356 aa30.63■■■□□ 2.49
LMBR1-211ENST00000444719 KCNQ2O43526 872 aa30.62■■■□□ 2.49
LMBR1-211ENST00000444719 POLKQ9UBT6 870 aa30.61■■■□□ 2.49
LMBR1-211ENST00000444719 NUP188Q5SRE5 1749 aa30.61■■■□□ 2.49
LMBR1-211ENST00000444719 R3HDM1Q15032 1099 aaKnown RBP30.6■■■□□ 2.49
LMBR1-211ENST00000444719 MEGF6O75095 1541 aa30.59■■■□□ 2.49
LMBR1-211ENST00000444719 KNSTRNQ9Y448 316 aa30.59■■■□□ 2.49
LMBR1-211ENST00000444719 PLSCR1O15162 318 aa30.57■■■□□ 2.48
LMBR1-211ENST00000444719 ZCRB1Q8TBF4 217 aaKnown RBP30.57■■■□□ 2.48
LMBR1-211ENST00000444719 NHSQ6T4R5 1651 aa30.56■■■□□ 2.48
LMBR1-211ENST00000444719 WASHC2AQ641Q2 1341 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms