RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 RIC3Q7Z5B4 369 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 FAM13BQ9NYF5 915 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 FAM83GA6ND36 823 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
TOP3B-210ENST00000444502 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
TOP3B-210ENST00000444502 CROCC2H7BZ55 1655 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 AAMPQ13685 434 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 CABLES1Q8TDN4 633 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 HDGFL1Q5TGJ6 251 aa13.04□□□□□ -0.32
TOP3B-210ENST00000444502 HDAC5Q9UQL6 1122 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 PTPRTO14522 1441 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 SLC4A2P04920 1241 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 HSP90AB2PQ58FF8 381 aa13.03□□□□□ -0.32
TOP3B-210ENST00000444502 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
TOP3B-210ENST00000444502 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.32
TOP3B-210ENST00000444502 DDX58O95786 925 aaKnown RBP13.02□□□□□ -0.32
TOP3B-210ENST00000444502 TSPOAP1O95153 1857 aa13.02□□□□□ -0.32
TOP3B-210ENST00000444502 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.32
TOP3B-210ENST00000444502 POLKQ9UBT6 870 aa13.02□□□□□ -0.32
TOP3B-210ENST00000444502 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
TOP3B-210ENST00000444502 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
TOP3B-210ENST00000444502 MYL6BP14649 208 aa13.02□□□□□ -0.33
TOP3B-210ENST00000444502 CABP4P57796 275 aa13.01□□□□□ -0.33
TOP3B-210ENST00000444502 KCNH5Q8NCM2 988 aa13.01□□□□□ -0.33
TOP3B-210ENST00000444502 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
TOP3B-210ENST00000444502 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
TOP3B-210ENST00000444502 NSD2O96028 1365 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
TOP3B-210ENST00000444502 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
TOP3B-210ENST00000444502 KLHL34Q8N239 644 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 TRPM2O94759 1503 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 ZFYVE16Q7Z3T8 1539 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 MCCP23508 829 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
TOP3B-210ENST00000444502 MPRIPQ6WCQ1 1025 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 TULP1O00294 542 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-210ENST00000444502 LTKP29376 864 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 TMX4Q9H1E5 349 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-210ENST00000444502 ZHX1Q9UKY1 873 aaPredicted RBP12.99□□□□□ -0.33
TOP3B-210ENST00000444502 G3V3G9 751 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 GPATCH3Q96I76 525 aa12.99□□□□□ -0.33
TOP3B-210ENST00000444502 IQGAP3Q86VI3 1631 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 FOXD4L5Q5VV16 416 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-210ENST00000444502 AEBP1Q8IUX7 1158 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 FOXD4L4Q8WXT5 416 aaPredicted RBP12.98□□□□□ -0.33
TOP3B-210ENST00000444502 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
TOP3B-210ENST00000444502 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 NGLY1Q96IV0 654 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 PRDM10Q9NQV6 1147 aa12.98□□□□□ -0.33
TOP3B-210ENST00000444502 PLXNC1O60486 1568 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 UBAP1LF5GYI3 381 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 TRPM1Q7Z4N2 1603 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 UBTFL1P0CB47 393 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-210ENST00000444502 CHD1LQ86WJ1 897 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 MBIPQ9NS73 344 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
TOP3B-210ENST00000444502 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 CCDC27Q2M243 656 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 TOMM22Q9NS69 142 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
TOP3B-210ENST00000444502 ORAI2Q96SN7 254 aa12.96□□□□□ -0.33
TOP3B-210ENST00000444502 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.34
TOP3B-210ENST00000444502 UNC13BO14795 1591 aa12.96□□□□□ -0.34
TOP3B-210ENST00000444502 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-210ENST00000444502 NEO1Q92859 1461 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 ABCC11Q96J66 1382 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 PPIP5K1Q6PFW1 1433 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 DDX17Q92841 729 aaKnown RBP12.95□□□□□ -0.34
TOP3B-210ENST00000444502 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 SEC24BO95487 1268 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
TOP3B-210ENST00000444502 MSH6P52701 1360 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 CLTCL1P53675 1640 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 KRT24Q2M2I5 525 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 PDIA4P13667 645 aaKnown RBP12.94□□□□□ -0.34
TOP3B-210ENST00000444502 G3BP1Q13283 466 aaKnown RBP eCLIP12.94□□□□□ -0.34
TOP3B-210ENST00000444502 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
TOP3B-210ENST00000444502 F6X3S4 739 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 MSNP26038 577 aaKnown RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 ALDH1L2Q3SY69 923 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 C8orf58Q8NAV2 365 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 CCDC85AQ96PX6 553 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 C19orf44Q9H6X5 657 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 TBX22Q9Y458 520 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 IFIT2P09913 472 aaKnown RBP12.93□□□□□ -0.34
TOP3B-210ENST00000444502 GCC1Q96CN9 775 aa12.93□□□□□ -0.34
TOP3B-210ENST00000444502 LRRC59Q96AG4 307 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms