RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 BCL9O00512 1426 aa21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 CRB1P82279 1406 aa21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 ZNF827Q17R98 1081 aa21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 JMYQ8N9B5 988 aa21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 MARCH10Q8NA82 808 aaPredicted RBP21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 KLRG1Q96E93 195 aa21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 WWC3Q9ULE0 1092 aa21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 COL5A2P05997 1499 aaPredicted RBP21.76■■□□□ 1.07
SYNCRIP-203ENST00000444272 PRR36Q9H6K5 1346 aa21.75■■□□□ 1.07
SYNCRIP-203ENST00000444272 WNK3Q9BYP7 1800 aa21.73■■□□□ 1.07
SYNCRIP-203ENST00000444272 PIK3C2GO75747 1445 aa21.73■■□□□ 1.07
SYNCRIP-203ENST00000444272 SLC16A10Q8TF71 515 aa21.73■■□□□ 1.07
SYNCRIP-203ENST00000444272 HTRA3P83110 453 aa21.71■■□□□ 1.07
SYNCRIP-203ENST00000444272 QSER1Q2KHR3 1735 aa21.7■■□□□ 1.06
SYNCRIP-203ENST00000444272 HIRIP3Q9BW71 556 aaPredicted RBP21.7■■□□□ 1.06
SYNCRIP-203ENST00000444272 CPDO75976 1380 aa21.7■■□□□ 1.06
SYNCRIP-203ENST00000444272 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.06
SYNCRIP-203ENST00000444272 TOMM70O94826 608 aa21.68■■□□□ 1.06
SYNCRIP-203ENST00000444272 ITGAEP38570 1179 aa21.68■■□□□ 1.06
SYNCRIP-203ENST00000444272 POGKQ9P215 609 aa21.68■■□□□ 1.06
SYNCRIP-203ENST00000444272 ARHGEF28Q8N1W1 1705 aaKnown RBP21.67■■□□□ 1.06
SYNCRIP-203ENST00000444272 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
SYNCRIP-203ENST00000444272 RGL3Q3MIN7 710 aa21.67■■□□□ 1.06
SYNCRIP-203ENST00000444272 NHSQ6T4R5 1651 aa21.66■■□□□ 1.06
SYNCRIP-203ENST00000444272 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
SYNCRIP-203ENST00000444272 PNPLA7Q6ZV29 1317 aa21.63■■□□□ 1.05
SYNCRIP-203ENST00000444272 TUBGCP6Q96RT7 1819 aa21.63■■□□□ 1.05
SYNCRIP-203ENST00000444272 TOM1L2Q6ZVM7 507 aa21.62■■□□□ 1.05
SYNCRIP-203ENST00000444272 ITSN1Q15811 1721 aa21.61■■□□□ 1.05
SYNCRIP-203ENST00000444272 AKT1S1Q96B36 256 aa21.61■■□□□ 1.05
SYNCRIP-203ENST00000444272 LRRC4BQ9NT99 713 aa21.61■■□□□ 1.05
SYNCRIP-203ENST00000444272 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
SYNCRIP-203ENST00000444272 MINK1Q8N4C8 1332 aaPredicted RBP21.59■■□□□ 1.05
SYNCRIP-203ENST00000444272 ACSBG1Q96GR2 724 aa21.59■■□□□ 1.05
SYNCRIP-203ENST00000444272 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
SYNCRIP-203ENST00000444272 BTAF1O14981 1849 aa21.59■■□□□ 1.05
SYNCRIP-203ENST00000444272 USP19O94966 1318 aa21.57■■□□□ 1.04
SYNCRIP-203ENST00000444272 WASLO00401 505 aaPredicted RBP21.57■■□□□ 1.04
SYNCRIP-203ENST00000444272 CDCA7Q9BWT1 371 aaPredicted RBP21.57■■□□□ 1.04
SYNCRIP-203ENST00000444272 BRD4O60885 1362 aaPredicted RBP21.57■■□□□ 1.04
SYNCRIP-203ENST00000444272 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
SYNCRIP-203ENST00000444272 HSPA1AP0DMV8 641 aaKnown RBP21.56■■□□□ 1.04
SYNCRIP-203ENST00000444272 HSPA1BP0DMV9 641 aaKnown RBP21.56■■□□□ 1.04
SYNCRIP-203ENST00000444272 CFAP70Q5T0N1 1121 aa21.56■■□□□ 1.04
SYNCRIP-203ENST00000444272 ABTB2Q8N961 1025 aa21.56■■□□□ 1.04
SYNCRIP-203ENST00000444272 GCP02774 474 aa21.55■■□□□ 1.04
SYNCRIP-203ENST00000444272 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
SYNCRIP-203ENST00000444272 EXOC5O00471 708 aa21.53■■□□□ 1.04
SYNCRIP-203ENST00000444272 USP6P35125 1406 aa21.51■■□□□ 1.03
SYNCRIP-203ENST00000444272 TNS2Q63HR2 1409 aa21.51■■□□□ 1.03
SYNCRIP-203ENST00000444272 RBM46Q8TBY0 533 aaKnown RBP21.5■■□□□ 1.03
SYNCRIP-203ENST00000444272 NMRK2Q9NPI5 230 aa21.5■■□□□ 1.03
SYNCRIP-203ENST00000444272 CD2APQ9Y5K6 639 aa21.5■■□□□ 1.03
SYNCRIP-203ENST00000444272 WDR17Q8IZU2 1322 aa21.5■■□□□ 1.03
SYNCRIP-203ENST00000444272 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
SYNCRIP-203ENST00000444272 NUDT16Q96DE0 195 aaKnown RBP21.48■■□□□ 1.03
SYNCRIP-203ENST00000444272 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
SYNCRIP-203ENST00000444272 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
SYNCRIP-203ENST00000444272 MSH5O43196 834 aa21.47■■□□□ 1.03
SYNCRIP-203ENST00000444272 FAM161AQ3B820 660 aa21.47■■□□□ 1.03
SYNCRIP-203ENST00000444272 NLRP13Q86W25 1043 aa21.47■■□□□ 1.03
SYNCRIP-203ENST00000444272 TRAK1Q9UPV9 953 aa21.47■■□□□ 1.03
SYNCRIP-203ENST00000444272 ACEP12821 1306 aa21.47■■□□□ 1.03
SYNCRIP-203ENST00000444272 KAT6BQ8WYB5 2073 aa21.46■■□□□ 1.03
SYNCRIP-203ENST00000444272 TRPM1Q7Z4N2 1603 aa21.46■■□□□ 1.03
SYNCRIP-203ENST00000444272 POLR3AO14802 1390 aaPredicted RBP21.46■■□□□ 1.03
SYNCRIP-203ENST00000444272 COL18A1P39060 1754 aa21.46■■□□□ 1.03
SYNCRIP-203ENST00000444272 SLC27A3Q5K4L6 730 aa21.45■■□□□ 1.02
SYNCRIP-203ENST00000444272 C16orf71Q8IYS4 520 aaPredicted RBP21.44■■□□□ 1.02
SYNCRIP-203ENST00000444272 IGSF1Q8N6C5 1336 aa21.44■■□□□ 1.02
SYNCRIP-203ENST00000444272 KCNQ4P56696 695 aa21.43■■□□□ 1.02
SYNCRIP-203ENST00000444272 FSTL1Q12841 308 aa21.43■■□□□ 1.02
SYNCRIP-203ENST00000444272 AXIN2Q9Y2T1 843 aa21.43■■□□□ 1.02
SYNCRIP-203ENST00000444272 CICQ96RK0 1608 aaPredicted RBP21.42■■□□□ 1.02
SYNCRIP-203ENST00000444272 RGPD5Q99666 1765 aa21.41■■□□□ 1.02
SYNCRIP-203ENST00000444272 PIK3C2AO00443 1686 aa21.41■■□□□ 1.02
SYNCRIP-203ENST00000444272 ABCC6O95255 1503 aa21.41■■□□□ 1.02
SYNCRIP-203ENST00000444272 CARD10Q9BWT7 1032 aa21.41■■□□□ 1.02
SYNCRIP-203ENST00000444272 COL23A1Q86Y22 540 aaPredicted RBP21.4■■□□□ 1.02
SYNCRIP-203ENST00000444272 ADGRB1O14514 1584 aa21.4■■□□□ 1.02
SYNCRIP-203ENST00000444272 CSB-PGBD3P0DP91 1061 aa21.39■■□□□ 1.01
SYNCRIP-203ENST00000444272 SLIT3O75094 1523 aa21.36■■□□□ 1.01
SYNCRIP-203ENST00000444272 PPIP5K1Q6PFW1 1433 aa21.36■■□□□ 1.01
SYNCRIP-203ENST00000444272 CCDC7Q96M83 1385 aa21.34■■□□□ 1.01
SYNCRIP-203ENST00000444272 LY75O60449 1722 aa21.32■■□□□ 1
SYNCRIP-203ENST00000444272 CPSF1Q10570 1443 aaKnown RBP21.32■■□□□ 1
SYNCRIP-203ENST00000444272 PLEKHG3A1L390 1219 aa21.31■■□□□ 1
SYNCRIP-203ENST00000444272 NLRP6P59044 892 aa21.3■■□□□ 1
SYNCRIP-203ENST00000444272 CDK19Q9BWU1 502 aa21.3■■□□□ 1
SYNCRIP-203ENST00000444272 CCDC61Q9Y6R9 512 aa21.3■■□□□ 1
SYNCRIP-203ENST00000444272 KIAA1210Q9ULL0 1709 aa21.27■■□□□ 1
SYNCRIP-203ENST00000444272 KCPQ6ZWJ8 1503 aa21.25■□□□□ 0.99
SYNCRIP-203ENST00000444272 SMC1BQ8NDV3 1235 aa21.25■□□□□ 0.99
SYNCRIP-203ENST00000444272 CCNL1Q9UK58 526 aaPredicted RBP21.25■□□□□ 0.99
SYNCRIP-203ENST00000444272 MLLT1Q03111 559 aaPredicted RBP21.24■□□□□ 0.99
SYNCRIP-203ENST00000444272 ARHGEF25Q86VW2 580 aa21.23■□□□□ 0.99
SYNCRIP-203ENST00000444272 SYTL4Q96C24 671 aaPredicted RBP21.23■□□□□ 0.99
SYNCRIP-203ENST00000444272 C10orf71Q711Q0 1435 aa21.22■□□□□ 0.99
SYNCRIP-203ENST00000444272 RRAGCQ9HB90 399 aa21.22■□□□□ 0.99
SYNCRIP-203ENST00000444272 TNRC6CQ9HCJ0 1690 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms