RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 CSB-PGBD3P0DP91 1061 aa16.65■□□□□ 0.26
TTC28-203ENST00000442232 ABCC6O95255 1503 aa16.65■□□□□ 0.26
TTC28-203ENST00000442232 OVOS2A0A0G2JMS6 1433 aa16.64■□□□□ 0.25
TTC28-203ENST00000442232 OVOS2A0A0J9YW53 1432 aa16.64■□□□□ 0.25
TTC28-203ENST00000442232 OVOS2Q6IE36 1432 aa16.64■□□□□ 0.25
TTC28-203ENST00000442232 TRIM26Q12899 539 aaPredicted RBP16.64■□□□□ 0.25
TTC28-203ENST00000442232 EZH2Q15910 746 aaKnown RBP16.64■□□□□ 0.25
TTC28-203ENST00000442232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
TTC28-203ENST00000442232 USP54Q70EL1 1684 aa16.64■□□□□ 0.25
TTC28-203ENST00000442232 NFAT5O94916 1531 aa16.64■□□□□ 0.25
TTC28-203ENST00000442232 WDR17Q8IZU2 1322 aa16.64■□□□□ 0.25
TTC28-203ENST00000442232 RREB1Q92766 1687 aa16.63■□□□□ 0.25
TTC28-203ENST00000442232 LTN1O94822 1766 aa16.62■□□□□ 0.25
TTC28-203ENST00000442232 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
TTC28-203ENST00000442232 DDB1Q16531 1140 aa16.62■□□□□ 0.25
TTC28-203ENST00000442232 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
TTC28-203ENST00000442232 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
TTC28-203ENST00000442232 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
TTC28-203ENST00000442232 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
TTC28-203ENST00000442232 R3HDM1Q15032 1099 aaKnown RBP16.61■□□□□ 0.25
TTC28-203ENST00000442232 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
TTC28-203ENST00000442232 NUP188Q5SRE5 1749 aa16.6■□□□□ 0.25
TTC28-203ENST00000442232 CAMKK2Q96RR4 588 aa16.6■□□□□ 0.25
TTC28-203ENST00000442232 SBF2Q86WG5 1849 aa16.6■□□□□ 0.25
TTC28-203ENST00000442232 PEAK1Q9H792 1746 aa16.59■□□□□ 0.25
TTC28-203ENST00000442232 AXIN2Q9Y2T1 843 aa16.59■□□□□ 0.25
TTC28-203ENST00000442232 USP31Q70CQ4 1352 aa16.59■□□□□ 0.25
TTC28-203ENST00000442232 NINLQ9Y2I6 1382 aa16.59■□□□□ 0.25
TTC28-203ENST00000442232 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
TTC28-203ENST00000442232 RGPD3A6NKT7 1758 aaPredicted RBP16.59■□□□□ 0.25
TTC28-203ENST00000442232 RGPD4Q7Z3J3 1758 aa16.59■□□□□ 0.25
TTC28-203ENST00000442232 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
TTC28-203ENST00000442232 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.24
TTC28-203ENST00000442232 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
TTC28-203ENST00000442232 CCDC7Q96M83 1385 aa16.58■□□□□ 0.24
TTC28-203ENST00000442232 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
TTC28-203ENST00000442232 NME9Q86XW9 330 aa16.57■□□□□ 0.24
TTC28-203ENST00000442232 SLC12A5Q9H2X9 1139 aa16.57■□□□□ 0.24
TTC28-203ENST00000442232 ST20-MTHFSA0A0A6YYL1 179 aa16.55■□□□□ 0.24
TTC28-203ENST00000442232 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
TTC28-203ENST00000442232 EXOC5O00471 708 aa16.53■□□□□ 0.24
TTC28-203ENST00000442232 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
TTC28-203ENST00000442232 TNS2Q63HR2 1409 aa16.53■□□□□ 0.24
TTC28-203ENST00000442232 ERBB3P21860 1342 aa16.52■□□□□ 0.24
TTC28-203ENST00000442232 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
TTC28-203ENST00000442232 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
TTC28-203ENST00000442232 TESK2Q96S53 571 aa16.51■□□□□ 0.23
TTC28-203ENST00000442232 USP47Q96K76 1375 aa16.51■□□□□ 0.23
TTC28-203ENST00000442232 TMF1P82094 1093 aa16.5■□□□□ 0.23
TTC28-203ENST00000442232 ANKRD24Q8TF21 1146 aa16.5■□□□□ 0.23
TTC28-203ENST00000442232 COG3Q96JB2 828 aa16.5■□□□□ 0.23
TTC28-203ENST00000442232 BCL9O00512 1426 aa16.5■□□□□ 0.23
TTC28-203ENST00000442232 PLSCR1O15162 318 aa16.49■□□□□ 0.23
TTC28-203ENST00000442232 IL2RBP14784 551 aa16.48■□□□□ 0.23
TTC28-203ENST00000442232 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
TTC28-203ENST00000442232 NHSQ6T4R5 1651 aa16.48■□□□□ 0.23
TTC28-203ENST00000442232 KAT6BQ8WYB5 2073 aa16.48■□□□□ 0.23
TTC28-203ENST00000442232 ANKRD36BQ8N2N9 1353 aa16.48■□□□□ 0.23
TTC28-203ENST00000442232 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
TTC28-203ENST00000442232 AMPHP49418 695 aa16.45■□□□□ 0.22
TTC28-203ENST00000442232 IP6K1Q92551 441 aa16.45■□□□□ 0.22
TTC28-203ENST00000442232 PPP1R1BQ9UD71 204 aaPredicted RBP16.45■□□□□ 0.22
TTC28-203ENST00000442232 LTV1Q96GA3 475 aaPredicted RBP16.44■□□□□ 0.22
TTC28-203ENST00000442232 SPON1Q9HCB6 807 aa16.43■□□□□ 0.22
TTC28-203ENST00000442232 RTL1A6NKG5 1358 aa16.42■□□□□ 0.22
TTC28-203ENST00000442232 PTF1AQ7RTS3 328 aa16.42■□□□□ 0.22
TTC28-203ENST00000442232 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
TTC28-203ENST00000442232 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
TTC28-203ENST00000442232 SMG6Q86US8 1419 aaKnown RBP16.42■□□□□ 0.22
TTC28-203ENST00000442232 BTAF1O14981 1849 aa16.42■□□□□ 0.22
TTC28-203ENST00000442232 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
TTC28-203ENST00000442232 CLSPNQ9HAW4 1339 aa16.42■□□□□ 0.22
TTC28-203ENST00000442232 STK32BQ9NY57 414 aa16.41■□□□□ 0.22
TTC28-203ENST00000442232 KCNQ2O43526 872 aa16.4■□□□□ 0.22
TTC28-203ENST00000442232 HOXC9P31274 260 aa16.4■□□□□ 0.22
TTC28-203ENST00000442232 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
TTC28-203ENST00000442232 ANO8Q9HCE9 1232 aaPredicted RBP16.4■□□□□ 0.22
TTC28-203ENST00000442232 RGPD2P0DJD1 1756 aa16.4■□□□□ 0.22
TTC28-203ENST00000442232 CASZ1Q86V15 1759 aa16.4■□□□□ 0.22
TTC28-203ENST00000442232 TXNRD1Q16881 649 aa16.39■□□□□ 0.21
TTC28-203ENST00000442232 MYOM1P52179 1685 aa16.39■□□□□ 0.21
TTC28-203ENST00000442232 DDX54Q8TDD1 881 aaKnown RBP16.38■□□□□ 0.21
TTC28-203ENST00000442232 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
TTC28-203ENST00000442232 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
TTC28-203ENST00000442232 DOT1LQ8TEK3 1739 aa16.36■□□□□ 0.21
TTC28-203ENST00000442232 FYB1O15117 783 aa16.36■□□□□ 0.21
TTC28-203ENST00000442232 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
TTC28-203ENST00000442232 PROM2Q8N271 834 aa16.35■□□□□ 0.21
TTC28-203ENST00000442232 NSD3Q9BZ95 1437 aa16.35■□□□□ 0.21
TTC28-203ENST00000442232 FBLN1P23142 703 aa16.34■□□□□ 0.21
TTC28-203ENST00000442232 SLC15A2Q16348 729 aa16.34■□□□□ 0.21
TTC28-203ENST00000442232 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.21
TTC28-203ENST00000442232 RAPGEF4Q8WZA2 1011 aa16.33■□□□□ 0.2
TTC28-203ENST00000442232 SYTL4Q96C24 671 aaPredicted RBP16.33■□□□□ 0.2
TTC28-203ENST00000442232 FLT4P35916 1363 aa16.33■□□□□ 0.2
TTC28-203ENST00000442232 MEGF6O75095 1541 aa16.32■□□□□ 0.2
TTC28-203ENST00000442232 ZBTB7AO95365 584 aa16.32■□□□□ 0.2
TTC28-203ENST00000442232 CGNL1Q0VF96 1302 aa16.32■□□□□ 0.2
TTC28-203ENST00000442232 PAPPAQ13219 1627 aa16.32■□□□□ 0.2
TTC28-203ENST00000442232 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms