RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MST1RQ04912 1400 aa9.65□□□□□ -0.87
CDC42BPA-208ENST00000442054 IQSEC2Q5JU85 1478 aa9.65□□□□□ -0.87
CDC42BPA-208ENST00000442054 TMEM131LA2VDJ0 1609 aa9.64□□□□□ -0.87
CDC42BPA-208ENST00000442054 USHBP1Q8N6Y0 703 aa9.64□□□□□ -0.87
CDC42BPA-208ENST00000442054 SETBP1Q9Y6X0 1596 aa9.64□□□□□ -0.87
CDC42BPA-208ENST00000442054 NPC1L1Q9UHC9 1359 aa9.64□□□□□ -0.87
CDC42BPA-208ENST00000442054 TRIM37O94972 964 aa9.64□□□□□ -0.87
CDC42BPA-208ENST00000442054 FBLN1P23142 703 aa9.64□□□□□ -0.87
CDC42BPA-208ENST00000442054 ILDR2Q71H61 639 aa9.64□□□□□ -0.87
CDC42BPA-208ENST00000442054 PNPLA6Q8IY17 1366 aa9.63□□□□□ -0.87
CDC42BPA-208ENST00000442054 RRP1P56182 461 aaKnown RBP9.63□□□□□ -0.87
CDC42BPA-208ENST00000442054 SALL2Q9Y467 1007 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPA-208ENST00000442054 FAM196AQ6ZSG2 479 aa9.63□□□□□ -0.87
CDC42BPA-208ENST00000442054 SPG7Q9UQ90 795 aa9.63□□□□□ -0.87
CDC42BPA-208ENST00000442054 IL2RBP14784 551 aa9.63□□□□□ -0.87
CDC42BPA-208ENST00000442054 CDCA7Q9BWT1 371 aaPredicted RBP9.63□□□□□ -0.87
CDC42BPA-208ENST00000442054 NEXMIFQ5QGS0 1516 aa9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 RBM42Q9BTD8 480 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 TEFQ10587 303 aa9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 LAS1LQ9Y4W2 734 aaKnown RBP9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 ADGRB1O14514 1584 aa9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 DIP2AQ14689 1571 aa9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 TNS3Q68CZ2 1445 aa9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 MPRIPQ6WCQ1 1025 aa9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 ASXL1Q8IXJ9 1541 aa9.62□□□□□ -0.87
CDC42BPA-208ENST00000442054 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-208ENST00000442054 AMER1Q5JTC6 1135 aaPredicted RBP9.61□□□□□ -0.87
CDC42BPA-208ENST00000442054 TRMT2AQ8IZ69 625 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-208ENST00000442054 PNNQ9H307 717 aaKnown RBP9.61□□□□□ -0.87
CDC42BPA-208ENST00000442054 VPS72Q15906 364 aa9.61□□□□□ -0.87
CDC42BPA-208ENST00000442054 ANKARQ7Z5J8 1434 aa9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 DIAPH1O60610 1272 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 HMOX1P09601 288 aa9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 LTBP4Q8N2S1 1624 aa9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 KDM2BQ8NHM5 1336 aa9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 SBNO1A3KN83 1393 aa9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 TTC5Q8N0Z6 440 aa9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 ZCRB1Q8TBF4 217 aaKnown RBP9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
CDC42BPA-208ENST00000442054 HMGB2P26583 209 aaKnown RBP9.59□□□□□ -0.87
CDC42BPA-208ENST00000442054 ZNF530Q6P9A1 599 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-208ENST00000442054 STK32BQ9NY57 414 aa9.59□□□□□ -0.87
CDC42BPA-208ENST00000442054 STRCQ7RTU9 1775 aa9.59□□□□□ -0.87
CDC42BPA-208ENST00000442054 ZNF142P52746 1687 aaPredicted RBP9.59□□□□□ -0.87
CDC42BPA-208ENST00000442054 MTHFSP49914 203 aa9.59□□□□□ -0.87
CDC42BPA-208ENST00000442054 NSD3Q9BZ95 1437 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 HSP90AB2PQ58FF8 381 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 SULT6B1Q6IMI4 303 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 DEFB132Q7Z7B7 95 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 CDCA7LQ96GN5 454 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 FYB1O15117 783 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 CABP4P57796 275 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 QRICH2Q9H0J4 1663 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 EXOC6Q8TAG9 804 aa9.58□□□□□ -0.88
CDC42BPA-208ENST00000442054 PSDA5PKW4 1024 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 EN1Q05925 392 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 ARHGEF28Q8N1W1 1705 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 GTF2E1P29083 439 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 IP6K1Q92551 441 aa9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 NINLQ9Y2I6 1382 aa9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 FNBP4Q8N3X1 1017 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 TMOD3Q9NYL9 352 aa9.57□□□□□ -0.88
CDC42BPA-208ENST00000442054 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-208ENST00000442054 TFCP2L1Q9NZI6 479 aa9.56□□□□□ -0.88
CDC42BPA-208ENST00000442054 MAP3K19Q56UN5 1328 aa9.56□□□□□ -0.88
CDC42BPA-208ENST00000442054 SBNO2Q9Y2G9 1366 aa9.56□□□□□ -0.88
CDC42BPA-208ENST00000442054 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
CDC42BPA-208ENST00000442054 RCAN3Q9UKA8 241 aa9.56□□□□□ -0.88
CDC42BPA-208ENST00000442054 HSP90AB1P08238 724 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-208ENST00000442054 ARHGEF25Q86VW2 580 aa9.55□□□□□ -0.88
CDC42BPA-208ENST00000442054 A0A1W2PP64 1363 aa9.55□□□□□ -0.88
CDC42BPA-208ENST00000442054 PTCD1O75127 700 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 DUSP27Q5VZP5 1158 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 CCDC125Q86Z20 511 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 ADGRB2O60241 1585 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 CARD10Q9BWT7 1032 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 AK7Q96M32 723 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 BACH2Q9BYV9 841 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 THRAP3Q9Y2W1 955 aaKnown RBP9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 ANKRD36BQ8N2N9 1353 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 WDR17Q8IZU2 1322 aa9.54□□□□□ -0.88
CDC42BPA-208ENST00000442054 HOXC9P31274 260 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 ERICH6Q7L0X2 663 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 IPO9Q96P70 1041 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 TECPR2O15040 1411 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 POLD1P28340 1107 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 NOP58Q9Y2X3 529 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 ANKRD26Q9UPS8 1709 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 USP6P35125 1406 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 IFNL2Q8IZJ0 200 aa9.53□□□□□ -0.88
CDC42BPA-208ENST00000442054 MS4A1P11836 297 aa9.52□□□□□ -0.89
CDC42BPA-208ENST00000442054 R3HDM1Q15032 1099 aaKnown RBP9.52□□□□□ -0.89
CDC42BPA-208ENST00000442054 PHF14O94880 888 aa9.52□□□□□ -0.89
CDC42BPA-208ENST00000442054 ADAMTS8Q9UP79 889 aa9.52□□□□□ -0.89
CDC42BPA-208ENST00000442054 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
CDC42BPA-208ENST00000442054 CCDC136Q96JN2 1154 aa9.51□□□□□ -0.89
CDC42BPA-208ENST00000442054 MYO5BQ9ULV0 1848 aa9.51□□□□□ -0.89
CDC42BPA-208ENST00000442054 C20orf194Q5TEA3 1177 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms