RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 PIK3C2AO00443 1686 aa28.51■■■□□ 2.15
UBE2F-215ENST00000441728 CPSF1Q10570 1443 aaKnown RBP28.5■■■□□ 2.15
UBE2F-215ENST00000441728 LRRC37A3O60309 1634 aa28.5■■■□□ 2.15
UBE2F-215ENST00000441728 TTC21BQ7Z4L5 1316 aa28.49■■■□□ 2.15
UBE2F-215ENST00000441728 TTC21AQ8NDW8 1320 aa28.49■■■□□ 2.15
UBE2F-215ENST00000441728 KCNQ2O43526 872 aa28.48■■■□□ 2.15
UBE2F-215ENST00000441728 PLSCR1O15162 318 aa28.47■■■□□ 2.15
UBE2F-215ENST00000441728 BCL11BQ9C0K0 894 aaPredicted RBP28.47■■■□□ 2.15
UBE2F-215ENST00000441728 SIN3AQ96ST3 1273 aa28.46■■■□□ 2.15
UBE2F-215ENST00000441728 ARHGEF25Q86VW2 580 aa28.45■■■□□ 2.14
UBE2F-215ENST00000441728 AXIN2Q9Y2T1 843 aa28.45■■■□□ 2.14
UBE2F-215ENST00000441728 KTN1Q86UP2 1357 aaKnown RBP28.45■■■□□ 2.14
UBE2F-215ENST00000441728 PEAK1Q9H792 1746 aa28.43■■■□□ 2.14
UBE2F-215ENST00000441728 CARD10Q9BWT7 1032 aa28.43■■■□□ 2.14
UBE2F-215ENST00000441728 RGPD3A6NKT7 1758 aaPredicted RBP28.42■■■□□ 2.14
UBE2F-215ENST00000441728 COL18A1P39060 1754 aa28.42■■■□□ 2.14
UBE2F-215ENST00000441728 AKAP12Q02952 1782 aa28.42■■■□□ 2.14
UBE2F-215ENST00000441728 RGPD4Q7Z3J3 1758 aa28.42■■■□□ 2.14
UBE2F-215ENST00000441728 WNK3Q9BYP7 1800 aa28.42■■■□□ 2.14
UBE2F-215ENST00000441728 EXOC5O00471 708 aa28.42■■■□□ 2.14
UBE2F-215ENST00000441728 SBF2Q86WG5 1849 aa28.41■■■□□ 2.14
UBE2F-215ENST00000441728 YY1P25490 414 aa28.41■■■□□ 2.14
UBE2F-215ENST00000441728 MARCH10Q8NA82 808 aaPredicted RBP28.41■■■□□ 2.14
UBE2F-215ENST00000441728 CCDC7Q96M83 1385 aa28.39■■■□□ 2.14
UBE2F-215ENST00000441728 NINLQ9Y2I6 1382 aa28.37■■■□□ 2.13
UBE2F-215ENST00000441728 RGPD5Q99666 1765 aa28.37■■■□□ 2.13
UBE2F-215ENST00000441728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.37■■■□□ 2.13
UBE2F-215ENST00000441728 STK32BQ9NY57 414 aa28.36■■■□□ 2.13
UBE2F-215ENST00000441728 TMC1Q8TDI8 760 aa28.35■■■□□ 2.13
UBE2F-215ENST00000441728 ANO8Q9HCE9 1232 aaPredicted RBP28.35■■■□□ 2.13
UBE2F-215ENST00000441728 PTF1AQ7RTS3 328 aa28.34■■■□□ 2.13
UBE2F-215ENST00000441728 HDGFL2Q7Z4V5 671 aaPredicted RBP28.34■■■□□ 2.13
UBE2F-215ENST00000441728 BCL9O00512 1426 aa28.34■■■□□ 2.13
UBE2F-215ENST00000441728 CARD11Q9BXL7 1154 aa28.32■■■□□ 2.12
UBE2F-215ENST00000441728 NLRP2Q9NX02 1062 aa28.32■■■□□ 2.12
UBE2F-215ENST00000441728 NFAT5O94916 1531 aa28.32■■■□□ 2.12
UBE2F-215ENST00000441728 ABCC6O95255 1503 aa28.32■■■□□ 2.12
UBE2F-215ENST00000441728 TXNRD1Q16881 649 aa28.31■■■□□ 2.12
UBE2F-215ENST00000441728 TNS2Q63HR2 1409 aa28.3■■■□□ 2.12
UBE2F-215ENST00000441728 ZBTB7AO95365 584 aa28.3■■■□□ 2.12
UBE2F-215ENST00000441728 MON2Q7Z3U7 1717 aa28.29■■■□□ 2.12
UBE2F-215ENST00000441728 SBNO2Q9Y2G9 1366 aa28.27■■■□□ 2.12
UBE2F-215ENST00000441728 NME9Q86XW9 330 aa28.27■■■□□ 2.12
UBE2F-215ENST00000441728 PROM2Q8N271 834 aa28.26■■■□□ 2.11
UBE2F-215ENST00000441728 USP31Q70CQ4 1352 aa28.25■■■□□ 2.11
UBE2F-215ENST00000441728 IL2RBP14784 551 aa28.25■■■□□ 2.11
UBE2F-215ENST00000441728 ACSBG1Q96GR2 724 aa28.25■■■□□ 2.11
UBE2F-215ENST00000441728 TERF2IPQ9NYB0 399 aa28.25■■■□□ 2.11
UBE2F-215ENST00000441728 ATF5Q9Y2D1 282 aaPredicted RBP28.25■■■□□ 2.11
UBE2F-215ENST00000441728 CASZ1Q86V15 1759 aa28.24■■■□□ 2.11
UBE2F-215ENST00000441728 ERBB3P21860 1342 aa28.24■■■□□ 2.11
UBE2F-215ENST00000441728 SLC15A2Q16348 729 aa28.24■■■□□ 2.11
UBE2F-215ENST00000441728 ANKRD24Q8TF21 1146 aa28.23■■■□□ 2.11
UBE2F-215ENST00000441728 PDGFDQ9GZP0 370 aaPredicted RBP28.22■■■□□ 2.11
UBE2F-215ENST00000441728 TONSLQ96HA7 1378 aa28.22■■■□□ 2.11
UBE2F-215ENST00000441728 LTN1O94822 1766 aa28.21■■■□□ 2.11
UBE2F-215ENST00000441728 EDC4Q6P2E9 1401 aaKnown RBP28.2■■■□□ 2.11
UBE2F-215ENST00000441728 NHSQ6T4R5 1651 aa28.19■■■□□ 2.1
UBE2F-215ENST00000441728 SLC12A5Q9H2X9 1139 aa28.19■■■□□ 2.1
UBE2F-215ENST00000441728 MTFR1LQ9H019 292 aa28.18■■■□□ 2.1
UBE2F-215ENST00000441728 USP54Q70EL1 1684 aa28.17■■■□□ 2.1
UBE2F-215ENST00000441728 MYOM1P52179 1685 aa28.16■■■□□ 2.1
UBE2F-215ENST00000441728 CD163L1Q9NR16 1453 aa28.15■■■□□ 2.1
UBE2F-215ENST00000441728 KAT6BQ8WYB5 2073 aa28.14■■■□□ 2.1
UBE2F-215ENST00000441728 PTGER2P43116 358 aa28.14■■■□□ 2.1
UBE2F-215ENST00000441728 LTV1Q96GA3 475 aaPredicted RBP28.14■■■□□ 2.1
UBE2F-215ENST00000441728 A0A1W2PP64 1363 aa28.12■■■□□ 2.09
UBE2F-215ENST00000441728 FHDC1Q9C0D6 1143 aaPredicted RBP28.12■■■□□ 2.09
UBE2F-215ENST00000441728 DDX54Q8TDD1 881 aaKnown RBP28.11■■■□□ 2.09
UBE2F-215ENST00000441728 COG3Q96JB2 828 aa28.1■■■□□ 2.09
UBE2F-215ENST00000441728 PUS7Q96PZ0 661 aaKnown RBP28.1■■■□□ 2.09
UBE2F-215ENST00000441728 IP6K1Q92551 441 aa28.09■■■□□ 2.09
UBE2F-215ENST00000441728 SYT17Q9BSW7 474 aa28.09■■■□□ 2.09
UBE2F-215ENST00000441728 BTAF1O14981 1849 aa28.08■■■□□ 2.09
UBE2F-215ENST00000441728 SLC24A1O60721 1099 aa28.08■■■□□ 2.09
UBE2F-215ENST00000441728 AMPHP49418 695 aa28.07■■■□□ 2.08
UBE2F-215ENST00000441728 SYTL4Q96C24 671 aaPredicted RBP28.07■■■□□ 2.08
UBE2F-215ENST00000441728 ARXQ96QS3 562 aa28.07■■■□□ 2.08
UBE2F-215ENST00000441728 FAM208AQ9UK61 1670 aaKnown RBP28.06■■■□□ 2.08
UBE2F-215ENST00000441728 SLC27A3Q5K4L6 730 aa28.03■■■□□ 2.08
UBE2F-215ENST00000441728 KLHL34Q8N239 644 aa28.02■■■□□ 2.08
UBE2F-215ENST00000441728 POLD1P28340 1107 aa28.01■■■□□ 2.07
UBE2F-215ENST00000441728 ZNF827Q17R98 1081 aa28■■■□□ 2.07
UBE2F-215ENST00000441728 PAPPAQ13219 1627 aa28■■■□□ 2.07
UBE2F-215ENST00000441728 MAP3K19Q56UN5 1328 aa27.99■■■□□ 2.07
UBE2F-215ENST00000441728 ST20-MTHFSA0A0A6YYL1 179 aa27.99■■■□□ 2.07
UBE2F-215ENST00000441728 HOXC9P31274 260 aa27.98■■■□□ 2.07
UBE2F-215ENST00000441728 SLC16A10Q8TF71 515 aa27.98■■■□□ 2.07
UBE2F-215ENST00000441728 SGIP1Q9BQI5 828 aa27.98■■■□□ 2.07
UBE2F-215ENST00000441728 LRRC4BQ9NT99 713 aa27.98■■■□□ 2.07
UBE2F-215ENST00000441728 TFCP2L1Q9NZI6 479 aa27.98■■■□□ 2.07
UBE2F-215ENST00000441728 PRIM1P49642 420 aaKnown RBP27.96■■■□□ 2.07
UBE2F-215ENST00000441728 GPR162Q16538 588 aa27.96■■■□□ 2.07
UBE2F-215ENST00000441728 ZCRB1Q8TBF4 217 aaKnown RBP27.96■■■□□ 2.07
UBE2F-215ENST00000441728 ANKRD36BQ8N2N9 1353 aa27.95■■■□□ 2.06
UBE2F-215ENST00000441728 SMG6Q86US8 1419 aaKnown RBP27.94■■■□□ 2.06
UBE2F-215ENST00000441728 ZNF784Q8NCA9 323 aaPredicted RBP27.94■■■□□ 2.06
UBE2F-215ENST00000441728 TESK2Q96S53 571 aa27.94■■■□□ 2.06
UBE2F-215ENST00000441728 AKT1S1Q96B36 256 aa27.93■■■□□ 2.06
UBE2F-215ENST00000441728 MAP3K5Q99683 1374 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms