RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 USP54Q70EL1 1684 aa25.47■■□□□ 1.67
SMPD4-210ENST00000441135 ABCC6O95255 1503 aa25.47■■□□□ 1.67
SMPD4-210ENST00000441135 DEFB132Q7Z7B7 95 aa25.46■■□□□ 1.67
SMPD4-210ENST00000441135 COL18A1P39060 1754 aa25.46■■□□□ 1.67
SMPD4-210ENST00000441135 SOX12O15370 315 aa25.45■■□□□ 1.66
SMPD4-210ENST00000441135 EIF4G2P78344 907 aaKnown RBP eCLIP25.45■■□□□ 1.66
SMPD4-210ENST00000441135 NME9Q86XW9 330 aa25.45■■□□□ 1.66
SMPD4-210ENST00000441135 WDR17Q8IZU2 1322 aa25.44■■□□□ 1.66
SMPD4-210ENST00000441135 BAG6P46379 1132 aa25.44■■□□□ 1.66
SMPD4-210ENST00000441135 FAM182BQ5T319 152 aa25.44■■□□□ 1.66
SMPD4-210ENST00000441135 FAM196AQ6ZSG2 479 aa25.44■■□□□ 1.66
SMPD4-210ENST00000441135 PDE3BQ13370 1112 aa25.43■■□□□ 1.66
SMPD4-210ENST00000441135 AXIN2Q9Y2T1 843 aa25.43■■□□□ 1.66
SMPD4-210ENST00000441135 RGPD1P0DJD0 1748 aa25.43■■□□□ 1.66
SMPD4-210ENST00000441135 TOM1L2Q6ZVM7 507 aa25.42■■□□□ 1.66
SMPD4-210ENST00000441135 PARP4Q9UKK3 1724 aaKnown RBP25.4■■□□□ 1.66
SMPD4-210ENST00000441135 DISP2A7MBM2 1401 aa25.4■■□□□ 1.66
SMPD4-210ENST00000441135 OVOS2A0A0J9YW53 1432 aa25.39■■□□□ 1.66
SMPD4-210ENST00000441135 OVOS2Q6IE36 1432 aa25.39■■□□□ 1.66
SMPD4-210ENST00000441135 CSB-PGBD3P0DP91 1061 aa25.38■■□□□ 1.65
SMPD4-210ENST00000441135 ANKRD36BQ8N2N9 1353 aa25.38■■□□□ 1.65
SMPD4-210ENST00000441135 C11orf95C9JLR9 678 aaPredicted RBP25.36■■□□□ 1.65
SMPD4-210ENST00000441135 HSPA5P11021 654 aaKnown RBP25.36■■□□□ 1.65
SMPD4-210ENST00000441135 CDCA7Q9BWT1 371 aaPredicted RBP25.36■■□□□ 1.65
SMPD4-210ENST00000441135 CARD10Q9BWT7 1032 aa25.36■■□□□ 1.65
SMPD4-210ENST00000441135 TNS1Q9HBL0 1735 aaKnown RBP25.35■■□□□ 1.65
SMPD4-210ENST00000441135 TRIM37O94972 964 aa25.34■■□□□ 1.65
SMPD4-210ENST00000441135 LRRC37A3O60309 1634 aa25.34■■□□□ 1.65
SMPD4-210ENST00000441135 CCDC7Q96M83 1385 aa25.33■■□□□ 1.65
SMPD4-210ENST00000441135 OVOS2A0A0G2JMS6 1433 aa25.32■■□□□ 1.64
SMPD4-210ENST00000441135 DDB1Q16531 1140 aa25.32■■□□□ 1.64
SMPD4-210ENST00000441135 MYOM1P52179 1685 aa25.32■■□□□ 1.64
SMPD4-210ENST00000441135 EN1Q05925 392 aaPredicted RBP25.31■■□□□ 1.64
SMPD4-210ENST00000441135 COG3Q96JB2 828 aa25.31■■□□□ 1.64
SMPD4-210ENST00000441135 ERBB3P21860 1342 aa25.31■■□□□ 1.64
SMPD4-210ENST00000441135 WNK3Q9BYP7 1800 aa25.3■■□□□ 1.64
SMPD4-210ENST00000441135 RGPD5Q99666 1765 aa25.3■■□□□ 1.64
SMPD4-210ENST00000441135 PARD3Q8TEW0 1356 aa25.3■■□□□ 1.64
SMPD4-210ENST00000441135 LTN1O94822 1766 aa25.29■■□□□ 1.64
SMPD4-210ENST00000441135 APBA3O96018 575 aa25.26■■□□□ 1.63
SMPD4-210ENST00000441135 PEAK1Q9H792 1746 aa25.26■■□□□ 1.63
SMPD4-210ENST00000441135 ANKRD24Q8TF21 1146 aa25.24■■□□□ 1.63
SMPD4-210ENST00000441135 IP6K1Q92551 441 aa25.24■■□□□ 1.63
SMPD4-210ENST00000441135 CAMKK2Q96RR4 588 aa25.24■■□□□ 1.63
SMPD4-210ENST00000441135 NLRP2Q9NX02 1062 aa25.24■■□□□ 1.63
SMPD4-210ENST00000441135 BCL9O00512 1426 aa25.23■■□□□ 1.63
SMPD4-210ENST00000441135 TNS2Q63HR2 1409 aa25.22■■□□□ 1.63
SMPD4-210ENST00000441135 EZH2Q15910 746 aaKnown RBP25.22■■□□□ 1.63
SMPD4-210ENST00000441135 SRCAPQ6ZRS2 3230 aa25.21■■□□□ 1.63
SMPD4-210ENST00000441135 MAP3K19Q56UN5 1328 aa25.2■■□□□ 1.62
SMPD4-210ENST00000441135 EXOC5O00471 708 aa25.2■■□□□ 1.62
SMPD4-210ENST00000441135 FYB1O15117 783 aa25.2■■□□□ 1.62
SMPD4-210ENST00000441135 MARCH10Q8NA82 808 aaPredicted RBP25.2■■□□□ 1.62
SMPD4-210ENST00000441135 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
SMPD4-210ENST00000441135 IL2RBP14784 551 aa25.18■■□□□ 1.62
SMPD4-210ENST00000441135 GGNBP2Q9H3C7 697 aa25.18■■□□□ 1.62
SMPD4-210ENST00000441135 FAM208AQ9UK61 1670 aaKnown RBP25.17■■□□□ 1.62
SMPD4-210ENST00000441135 AMPHP49418 695 aa25.17■■□□□ 1.62
SMPD4-210ENST00000441135 PSDA5PKW4 1024 aaPredicted RBP25.16■■□□□ 1.62
SMPD4-210ENST00000441135 HOXC9P31274 260 aa25.16■■□□□ 1.62
SMPD4-210ENST00000441135 BCL11BQ9C0K0 894 aaPredicted RBP25.16■■□□□ 1.62
SMPD4-210ENST00000441135 NSD3Q9BZ95 1437 aa25.15■■□□□ 1.62
SMPD4-210ENST00000441135 RREB1Q92766 1687 aa25.15■■□□□ 1.62
SMPD4-210ENST00000441135 KIF20BQ96Q89 1820 aa25.14■■□□□ 1.61
SMPD4-210ENST00000441135 LTV1Q96GA3 475 aaPredicted RBP25.13■■□□□ 1.61
SMPD4-210ENST00000441135 CARD14Q9BXL6 1004 aa25.13■■□□□ 1.61
SMPD4-210ENST00000441135 RGPD3A6NKT7 1758 aaPredicted RBP25.13■■□□□ 1.61
SMPD4-210ENST00000441135 RGPD4Q7Z3J3 1758 aa25.13■■□□□ 1.61
SMPD4-210ENST00000441135 SBF2Q86WG5 1849 aa25.12■■□□□ 1.61
SMPD4-210ENST00000441135 R3HDM1Q15032 1099 aaKnown RBP25.12■■□□□ 1.61
SMPD4-210ENST00000441135 FBLN1P23142 703 aa25.11■■□□□ 1.61
SMPD4-210ENST00000441135 LRP5O75197 1615 aa25.11■■□□□ 1.61
SMPD4-210ENST00000441135 KIF7Q2M1P5 1343 aa25.11■■□□□ 1.61
SMPD4-210ENST00000441135 KIF24Q5T7B8 1368 aa25.1■■□□□ 1.61
SMPD4-210ENST00000441135 NUP188Q5SRE5 1749 aa25.1■■□□□ 1.61
SMPD4-210ENST00000441135 PLSCR1O15162 318 aa25.1■■□□□ 1.61
SMPD4-210ENST00000441135 RRS1Q15050 365 aaKnown RBP25.1■■□□□ 1.61
SMPD4-210ENST00000441135 NBPF14Q5TI25 921 aa25.09■■□□□ 1.61
SMPD4-210ENST00000441135 POLR3GLQ9BT43 218 aa25.09■■□□□ 1.61
SMPD4-210ENST00000441135 SMG6Q86US8 1419 aaKnown RBP25.09■■□□□ 1.61
SMPD4-210ENST00000441135 CGNL1Q0VF96 1302 aa25.09■■□□□ 1.61
SMPD4-210ENST00000441135 FLT4P35916 1363 aa25.06■■□□□ 1.6
SMPD4-210ENST00000441135 PTF1AQ7RTS3 328 aa25.06■■□□□ 1.6
SMPD4-210ENST00000441135 INSRP06213 1382 aa25.05■■□□□ 1.6
SMPD4-210ENST00000441135 PANK3Q9H999 370 aa25.04■■□□□ 1.6
SMPD4-210ENST00000441135 NSD2O96028 1365 aa25.04■■□□□ 1.6
SMPD4-210ENST00000441135 NHSQ6T4R5 1651 aa25.04■■□□□ 1.6
SMPD4-210ENST00000441135 ANKRD26Q9UPS8 1709 aa25.02■■□□□ 1.6
SMPD4-210ENST00000441135 KCNQ2O43526 872 aa25■■□□□ 1.59
SMPD4-210ENST00000441135 HSP90AB2PQ58FF8 381 aa25■■□□□ 1.59
SMPD4-210ENST00000441135 NBPF6Q5VWK0 638 aa25■■□□□ 1.59
SMPD4-210ENST00000441135 NBPF4Q96M43 638 aa25■■□□□ 1.59
SMPD4-210ENST00000441135 MEGF6O75095 1541 aa24.99■■□□□ 1.59
SMPD4-210ENST00000441135 WASHC2AQ641Q2 1341 aa24.98■■□□□ 1.59
SMPD4-210ENST00000441135 DDX54Q8TDD1 881 aaKnown RBP24.98■■□□□ 1.59
SMPD4-210ENST00000441135 ACSBG1Q96GR2 724 aa24.98■■□□□ 1.59
SMPD4-210ENST00000441135 EMILIN1Q9Y6C2 1016 aa24.97■■□□□ 1.59
SMPD4-210ENST00000441135 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
SMPD4-210ENST00000441135 TXNRD1Q16881 649 aa24.96■■□□□ 1.59
SMPD4-210ENST00000441135 PROM2Q8N271 834 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms