RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
LYSMD1-202ENST00000440902 SOX12O15370 315 aa11.55□□□□□ -0.56
LYSMD1-202ENST00000440902 NBPF14Q5TI25 921 aa11.55□□□□□ -0.56
LYSMD1-202ENST00000440902 TOM1L2Q6ZVM7 507 aa11.55□□□□□ -0.56
LYSMD1-202ENST00000440902 MON2Q7Z3U7 1717 aa11.55□□□□□ -0.56
LYSMD1-202ENST00000440902 ROCK2O75116 1388 aaKnown RBP11.54□□□□□ -0.56
LYSMD1-202ENST00000440902 SIN3AQ96ST3 1273 aa11.54□□□□□ -0.56
LYSMD1-202ENST00000440902 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
LYSMD1-202ENST00000440902 DDB1Q16531 1140 aa11.53□□□□□ -0.56
LYSMD1-202ENST00000440902 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
LYSMD1-202ENST00000440902 LTN1O94822 1766 aa11.52□□□□□ -0.57
LYSMD1-202ENST00000440902 NFAT5O94916 1531 aa11.52□□□□□ -0.57
LYSMD1-202ENST00000440902 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
LYSMD1-202ENST00000440902 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
LYSMD1-202ENST00000440902 WDR17Q8IZU2 1322 aa11.52□□□□□ -0.57
LYSMD1-202ENST00000440902 CASZ1Q86V15 1759 aa11.51□□□□□ -0.57
LYSMD1-202ENST00000440902 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
LYSMD1-202ENST00000440902 CSB-PGBD3P0DP91 1061 aa11.51□□□□□ -0.57
LYSMD1-202ENST00000440902 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
LYSMD1-202ENST00000440902 ARHGEF25Q86VW2 580 aa11.5□□□□□ -0.57
LYSMD1-202ENST00000440902 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
LYSMD1-202ENST00000440902 PPP1R1BQ9UD71 204 aaPredicted RBP11.5□□□□□ -0.57
LYSMD1-202ENST00000440902 TTC21AQ8NDW8 1320 aa11.5□□□□□ -0.57
LYSMD1-202ENST00000440902 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
LYSMD1-202ENST00000440902 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
LYSMD1-202ENST00000440902 MARCH10Q8NA82 808 aaPredicted RBP11.49□□□□□ -0.57
LYSMD1-202ENST00000440902 ZNF692Q9BU19 519 aaPredicted RBP11.49□□□□□ -0.57
LYSMD1-202ENST00000440902 SPON1Q9HCB6 807 aa11.49□□□□□ -0.57
LYSMD1-202ENST00000440902 KCNQ2O43526 872 aa11.48□□□□□ -0.57
LYSMD1-202ENST00000440902 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
LYSMD1-202ENST00000440902 ANO8Q9HCE9 1232 aaPredicted RBP11.48□□□□□ -0.57
LYSMD1-202ENST00000440902 ABCC6O95255 1503 aa11.48□□□□□ -0.57
LYSMD1-202ENST00000440902 NHSQ6T4R5 1651 aa11.48□□□□□ -0.57
LYSMD1-202ENST00000440902 MYOM1P52179 1685 aa11.47□□□□□ -0.57
LYSMD1-202ENST00000440902 PLSCR1O15162 318 aa11.47□□□□□ -0.57
LYSMD1-202ENST00000440902 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.47□□□□□ -0.57
LYSMD1-202ENST00000440902 CDCA7Q9BWT1 371 aaPredicted RBP11.47□□□□□ -0.57
LYSMD1-202ENST00000440902 CARD10Q9BWT7 1032 aa11.47□□□□□ -0.57
LYSMD1-202ENST00000440902 TNS2Q63HR2 1409 aa11.46□□□□□ -0.57
LYSMD1-202ENST00000440902 CCDC7Q96M83 1385 aa11.46□□□□□ -0.57
LYSMD1-202ENST00000440902 CD163L1Q9NR16 1453 aa11.45□□□□□ -0.58
LYSMD1-202ENST00000440902 NINLQ9Y2I6 1382 aa11.45□□□□□ -0.58
LYSMD1-202ENST00000440902 BTAF1O14981 1849 aa11.45□□□□□ -0.58
LYSMD1-202ENST00000440902 BCL9O00512 1426 aa11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 KAT6BQ8WYB5 2073 aa11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 EXOC5O00471 708 aa11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 YY1P25490 414 aa11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 NME9Q86XW9 330 aa11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 PROM2Q8N271 834 aa11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 PDGFDQ9GZP0 370 aaPredicted RBP11.44□□□□□ -0.58
LYSMD1-202ENST00000440902 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
LYSMD1-202ENST00000440902 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
LYSMD1-202ENST00000440902 ACSBG1Q96GR2 724 aa11.43□□□□□ -0.58
LYSMD1-202ENST00000440902 CARD11Q9BXL7 1154 aa11.43□□□□□ -0.58
LYSMD1-202ENST00000440902 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
LYSMD1-202ENST00000440902 USP31Q70CQ4 1352 aa11.42□□□□□ -0.58
LYSMD1-202ENST00000440902 ERBB3P21860 1342 aa11.42□□□□□ -0.58
LYSMD1-202ENST00000440902 DCAF8L1A6NGE4 600 aa11.42□□□□□ -0.58
LYSMD1-202ENST00000440902 TXNRD1Q16881 649 aa11.42□□□□□ -0.58
LYSMD1-202ENST00000440902 STK32BQ9NY57 414 aa11.42□□□□□ -0.58
LYSMD1-202ENST00000440902 FAM208AQ9UK61 1670 aaKnown RBP11.42□□□□□ -0.58
LYSMD1-202ENST00000440902 HDGFL2Q7Z4V5 671 aaPredicted RBP11.41□□□□□ -0.58
LYSMD1-202ENST00000440902 SLC12A5Q9H2X9 1139 aa11.41□□□□□ -0.58
LYSMD1-202ENST00000440902 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
LYSMD1-202ENST00000440902 PAPPAQ13219 1627 aa11.41□□□□□ -0.58
LYSMD1-202ENST00000440902 EDC4Q6P2E9 1401 aaKnown RBP11.41□□□□□ -0.58
LYSMD1-202ENST00000440902 RGPD2P0DJD1 1756 aa11.41□□□□□ -0.58
LYSMD1-202ENST00000440902 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
LYSMD1-202ENST00000440902 IL2RBP14784 551 aa11.4□□□□□ -0.58
LYSMD1-202ENST00000440902 SLC15A2Q16348 729 aa11.4□□□□□ -0.58
LYSMD1-202ENST00000440902 ANKRD24Q8TF21 1146 aa11.4□□□□□ -0.58
LYSMD1-202ENST00000440902 TONSLQ96HA7 1378 aa11.4□□□□□ -0.59
LYSMD1-202ENST00000440902 NPM3O75607 178 aaKnown RBP11.39□□□□□ -0.59
LYSMD1-202ENST00000440902 DOT1LQ8TEK3 1739 aa11.39□□□□□ -0.59
LYSMD1-202ENST00000440902 PTGER2P43116 358 aa11.38□□□□□ -0.59
LYSMD1-202ENST00000440902 TERF2IPQ9NYB0 399 aa11.38□□□□□ -0.59
LYSMD1-202ENST00000440902 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
LYSMD1-202ENST00000440902 TUBGCP6Q96RT7 1819 aa11.37□□□□□ -0.59
LYSMD1-202ENST00000440902 LTV1Q96GA3 475 aaPredicted RBP11.37□□□□□ -0.59
LYSMD1-202ENST00000440902 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
LYSMD1-202ENST00000440902 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
LYSMD1-202ENST00000440902 FHDC1Q9C0D6 1143 aaPredicted RBP11.36□□□□□ -0.59
LYSMD1-202ENST00000440902 CHD4Q14839 1912 aa11.36□□□□□ -0.59
LYSMD1-202ENST00000440902 DDX54Q8TDD1 881 aaKnown RBP11.35□□□□□ -0.59
LYSMD1-202ENST00000440902 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
LYSMD1-202ENST00000440902 ZNF827Q17R98 1081 aa11.34□□□□□ -0.59
LYSMD1-202ENST00000440902 IP6K1Q92551 441 aa11.34□□□□□ -0.59
LYSMD1-202ENST00000440902 KIF20BQ96Q89 1820 aa11.34□□□□□ -0.59
LYSMD1-202ENST00000440902 LY75O60449 1722 aa11.34□□□□□ -0.59
LYSMD1-202ENST00000440902 COG3Q96JB2 828 aa11.33□□□□□ -0.6
LYSMD1-202ENST00000440902 SYT17Q9BSW7 474 aa11.33□□□□□ -0.6
LYSMD1-202ENST00000440902 LRRC4BQ9NT99 713 aa11.33□□□□□ -0.6
LYSMD1-202ENST00000440902 MAP3K19Q56UN5 1328 aa11.33□□□□□ -0.6
LYSMD1-202ENST00000440902 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
LYSMD1-202ENST00000440902 FBLN1P23142 703 aa11.32□□□□□ -0.6
LYSMD1-202ENST00000440902 AMPHP49418 695 aa11.32□□□□□ -0.6
LYSMD1-202ENST00000440902 SYTL4Q96C24 671 aaPredicted RBP11.32□□□□□ -0.6
LYSMD1-202ENST00000440902 PUS7Q96PZ0 661 aaKnown RBP11.32□□□□□ -0.6
LYSMD1-202ENST00000440902 TESK2Q96S53 571 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms