RNA–Protein interactions for RNA: ENST00000440053.1

VIL1-204, Transcript of villin 1, humanhuman

TSL 1 (best) BASIC

Gene VIL1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-204ENST00000440053 EDC4Q6P2E9 1401 aaKnown RBP29.07■■■□□ 2.24
VIL1-204ENST00000440053 TOM1L2Q6ZVM7 507 aa29.06■■■□□ 2.24
VIL1-204ENST00000440053 NFAT5O94916 1531 aa29.05■■■□□ 2.24
VIL1-204ENST00000440053 CRB1P82279 1406 aa29.05■■■□□ 2.24
VIL1-204ENST00000440053 THRAP3Q9Y2W1 955 aaKnown RBP29.04■■■□□ 2.24
VIL1-204ENST00000440053 PDE3BQ13370 1112 aa29.03■■■□□ 2.24
VIL1-204ENST00000440053 WDR17Q8IZU2 1322 aa29.02■■■□□ 2.24
VIL1-204ENST00000440053 CSB-PGBD3P0DP91 1061 aa29■■■□□ 2.23
VIL1-204ENST00000440053 NINLQ9Y2I6 1382 aa29■■■□□ 2.23
VIL1-204ENST00000440053 FBLN1P23142 703 aa28.99■■■□□ 2.23
VIL1-204ENST00000440053 RGPD5Q99666 1765 aa28.98■■■□□ 2.23
VIL1-204ENST00000440053 TRIM37O94972 964 aa28.98■■■□□ 2.23
VIL1-204ENST00000440053 FAM196AQ6ZSG2 479 aa28.97■■■□□ 2.23
VIL1-204ENST00000440053 EN1Q05925 392 aaPredicted RBP28.97■■■□□ 2.23
VIL1-204ENST00000440053 ANKRD36BQ8N2N9 1353 aa28.96■■■□□ 2.23
VIL1-204ENST00000440053 OVOS2A0A0J9YW53 1432 aa28.95■■■□□ 2.22
VIL1-204ENST00000440053 BAG6P46379 1132 aa28.95■■■□□ 2.22
VIL1-204ENST00000440053 OVOS2Q6IE36 1432 aa28.95■■■□□ 2.22
VIL1-204ENST00000440053 CARD10Q9BWT7 1032 aa28.94■■■□□ 2.22
VIL1-204ENST00000440053 CDCA8Q53HL2 280 aa28.93■■■□□ 2.22
VIL1-204ENST00000440053 COG3Q96JB2 828 aa28.93■■■□□ 2.22
VIL1-204ENST00000440053 USP54Q70EL1 1684 aa28.93■■■□□ 2.22
VIL1-204ENST00000440053 FYB1O15117 783 aa28.91■■■□□ 2.22
VIL1-204ENST00000440053 GGNBP2Q9H3C7 697 aa28.91■■■□□ 2.22
VIL1-204ENST00000440053 DDB1Q16531 1140 aa28.91■■■□□ 2.22
VIL1-204ENST00000440053 CARD14Q9BXL6 1004 aa28.9■■■□□ 2.22
VIL1-204ENST00000440053 HSPA5P11021 654 aaKnown RBP28.89■■■□□ 2.22
VIL1-204ENST00000440053 ANKRD24Q8TF21 1146 aa28.89■■■□□ 2.22
VIL1-204ENST00000440053 NLRP2Q9NX02 1062 aa28.89■■■□□ 2.22
VIL1-204ENST00000440053 APBA3O96018 575 aa28.88■■■□□ 2.21
VIL1-204ENST00000440053 EZH2Q15910 746 aaKnown RBP28.88■■■□□ 2.21
VIL1-204ENST00000440053 POLR3GLQ9BT43 218 aa28.88■■■□□ 2.21
VIL1-204ENST00000440053 ERBB3P21860 1342 aa28.87■■■□□ 2.21
VIL1-204ENST00000440053 PARP4Q9UKK3 1724 aaKnown RBP28.87■■■□□ 2.21
VIL1-204ENST00000440053 IP6K1Q92551 441 aa28.86■■■□□ 2.21
VIL1-204ENST00000440053 MARCH10Q8NA82 808 aaPredicted RBP28.85■■■□□ 2.21
VIL1-204ENST00000440053 LTV1Q96GA3 475 aaPredicted RBP28.85■■■□□ 2.21
VIL1-204ENST00000440053 LTN1O94822 1766 aa28.85■■■□□ 2.21
VIL1-204ENST00000440053 RGPD1P0DJD0 1748 aa28.85■■■□□ 2.21
VIL1-204ENST00000440053 MAP3K19Q56UN5 1328 aa28.85■■■□□ 2.21
VIL1-204ENST00000440053 EIF4G2P78344 907 aaKnown RBP eCLIP28.85■■■□□ 2.21
VIL1-204ENST00000440053 CAMKK2Q96RR4 588 aa28.84■■■□□ 2.21
VIL1-204ENST00000440053 SRCAPQ6ZRS2 3230 aa28.83■■■□□ 2.21
VIL1-204ENST00000440053 ABCC6O95255 1503 aa28.83■■■□□ 2.21
VIL1-204ENST00000440053 RRS1Q15050 365 aaKnown RBP28.83■■■□□ 2.21
VIL1-204ENST00000440053 CDCA7Q9BWT1 371 aaPredicted RBP28.83■■■□□ 2.21
VIL1-204ENST00000440053 DISP2A7MBM2 1401 aa28.83■■■□□ 2.2
VIL1-204ENST00000440053 TNS1Q9HBL0 1735 aaKnown RBP28.82■■■□□ 2.2
VIL1-204ENST00000440053 LRRC37A3O60309 1634 aa28.82■■■□□ 2.2
VIL1-204ENST00000440053 CCDC7Q96M83 1385 aa28.82■■■□□ 2.2
VIL1-204ENST00000440053 EXOC5O00471 708 aa28.81■■■□□ 2.2
VIL1-204ENST00000440053 PTF1AQ7RTS3 328 aa28.81■■■□□ 2.2
VIL1-204ENST00000440053 PSDA5PKW4 1024 aaPredicted RBP28.8■■■□□ 2.2
VIL1-204ENST00000440053 HOXC9P31274 260 aa28.8■■■□□ 2.2
VIL1-204ENST00000440053 AMPHP49418 695 aa28.8■■■□□ 2.2
VIL1-204ENST00000440053 MYOM1P52179 1685 aa28.78■■■□□ 2.2
VIL1-204ENST00000440053 OVOS2A0A0G2JMS6 1433 aa28.77■■■□□ 2.2
VIL1-204ENST00000440053 NSD3Q9BZ95 1437 aa28.76■■■□□ 2.2
VIL1-204ENST00000440053 WNK3Q9BYP7 1800 aa28.75■■■□□ 2.19
VIL1-204ENST00000440053 PEAK1Q9H792 1746 aa28.75■■■□□ 2.19
VIL1-204ENST00000440053 C11orf95C9JLR9 678 aaPredicted RBP28.75■■■□□ 2.19
VIL1-204ENST00000440053 IL2RBP14784 551 aa28.75■■■□□ 2.19
VIL1-204ENST00000440053 R3HDM1Q15032 1099 aaKnown RBP28.72■■■□□ 2.19
VIL1-204ENST00000440053 BCL11BQ9C0K0 894 aaPredicted RBP28.7■■■□□ 2.18
VIL1-204ENST00000440053 HSP90AB2PQ58FF8 381 aa28.69■■■□□ 2.18
VIL1-204ENST00000440053 KCNQ2O43526 872 aa28.68■■■□□ 2.18
VIL1-204ENST00000440053 ACSBG1Q96GR2 724 aa28.67■■■□□ 2.18
VIL1-204ENST00000440053 TNS2Q63HR2 1409 aa28.67■■■□□ 2.18
VIL1-204ENST00000440053 NBPF6Q5VWK0 638 aa28.66■■■□□ 2.18
VIL1-204ENST00000440053 NBPF4Q96M43 638 aa28.66■■■□□ 2.18
VIL1-204ENST00000440053 PANK3Q9H999 370 aa28.66■■■□□ 2.18
VIL1-204ENST00000440053 EMILIN1Q9Y6C2 1016 aa28.66■■■□□ 2.18
VIL1-204ENST00000440053 USHBP1Q8N6Y0 703 aa28.66■■■□□ 2.18
VIL1-204ENST00000440053 KIF20BQ96Q89 1820 aa28.66■■■□□ 2.18
VIL1-204ENST00000440053 SBF2Q86WG5 1849 aa28.65■■■□□ 2.18
VIL1-204ENST00000440053 BCL9O00512 1426 aa28.64■■■□□ 2.18
VIL1-204ENST00000440053 DDX54Q8TDD1 881 aaKnown RBP28.64■■■□□ 2.17
VIL1-204ENST00000440053 RTL1A6NKG5 1358 aa28.63■■■□□ 2.17
VIL1-204ENST00000440053 PARD3Q8TEW0 1356 aa28.63■■■□□ 2.17
VIL1-204ENST00000440053 CGNL1Q0VF96 1302 aa28.63■■■□□ 2.17
VIL1-204ENST00000440053 PLSCR1O15162 318 aa28.62■■■□□ 2.17
VIL1-204ENST00000440053 PPM1GO15355 546 aaPredicted RBP28.62■■■□□ 2.17
VIL1-204ENST00000440053 PROM2Q8N271 834 aa28.61■■■□□ 2.17
VIL1-204ENST00000440053 RGPD2P0DJD1 1756 aa28.61■■■□□ 2.17
VIL1-204ENST00000440053 TNNT2P45379 298 aaPredicted RBP28.59■■■□□ 2.17
VIL1-204ENST00000440053 INSRP06213 1382 aa28.58■■■□□ 2.17
VIL1-204ENST00000440053 FLT4P35916 1363 aa28.57■■■□□ 2.16
VIL1-204ENST00000440053 NBPF14Q5TI25 921 aa28.57■■■□□ 2.16
VIL1-204ENST00000440053 RREB1Q92766 1687 aa28.56■■■□□ 2.16
VIL1-204ENST00000440053 FAM208AQ9UK61 1670 aaKnown RBP28.56■■■□□ 2.16
VIL1-204ENST00000440053 ZCRB1Q8TBF4 217 aaKnown RBP28.55■■■□□ 2.16
VIL1-204ENST00000440053 POLKQ9UBT6 870 aa28.55■■■□□ 2.16
VIL1-204ENST00000440053 MEGF6O75095 1541 aa28.55■■■□□ 2.16
VIL1-204ENST00000440053 NUP188Q5SRE5 1749 aa28.54■■■□□ 2.16
VIL1-204ENST00000440053 SMG6Q86US8 1419 aaKnown RBP28.52■■■□□ 2.16
VIL1-204ENST00000440053 KIF7Q2M1P5 1343 aa28.52■■■□□ 2.16
VIL1-204ENST00000440053 KIF24Q5T7B8 1368 aa28.52■■■□□ 2.16
VIL1-204ENST00000440053 TXNRD1Q16881 649 aa28.52■■■□□ 2.16
VIL1-204ENST00000440053 ANO8Q9HCE9 1232 aaPredicted RBP28.51■■■□□ 2.15
VIL1-204ENST00000440053 RAPGEF4Q8WZA2 1011 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms