RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
AC012494.1-201ENST00000439259 SBNO1A3KN83 1393 aa11.77□□□□□ -0.53
AC012494.1-201ENST00000439259 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
AC012494.1-201ENST00000439259 SLIT2O94813 1529 aa11.76□□□□□ -0.53
AC012494.1-201ENST00000439259 UNC5CLQ8IV45 518 aa11.76□□□□□ -0.53
AC012494.1-201ENST00000439259 SIN3AQ96ST3 1273 aa11.76□□□□□ -0.53
AC012494.1-201ENST00000439259 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
AC012494.1-201ENST00000439259 ARHGEF28Q8N1W1 1705 aaKnown RBP11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 FAM83GA6ND36 823 aa11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 NUDT16Q96DE0 195 aaKnown RBP11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 CDK19Q9BWU1 502 aa11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
AC012494.1-201ENST00000439259 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
AC012494.1-201ENST00000439259 GPRASP1Q5JY77 1395 aa11.74□□□□□ -0.53
AC012494.1-201ENST00000439259 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
AC012494.1-201ENST00000439259 GLI3P10071 1580 aa11.73□□□□□ -0.53
AC012494.1-201ENST00000439259 ATP7BP35670 1465 aa11.73□□□□□ -0.53
AC012494.1-201ENST00000439259 EIF3AQ14152 1382 aaKnown RBP11.73□□□□□ -0.53
AC012494.1-201ENST00000439259 ATAD2Q6PL18 1390 aa11.73□□□□□ -0.53
AC012494.1-201ENST00000439259 L3MBTL2Q969R5 705 aa11.73□□□□□ -0.53
AC012494.1-201ENST00000439259 TRPM3Q9HCF6 1732 aaPredicted RBP11.73□□□□□ -0.53
AC012494.1-201ENST00000439259 NEUROD1Q13562 356 aa11.72□□□□□ -0.53
AC012494.1-201ENST00000439259 LCE2DQ5TA82 110 aaPredicted RBP11.72□□□□□ -0.53
AC012494.1-201ENST00000439259 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
AC012494.1-201ENST00000439259 CCDC9Q9Y3X0 531 aaKnown RBP11.72□□□□□ -0.53
AC012494.1-201ENST00000439259 ABCA3Q99758 1704 aa11.72□□□□□ -0.53
AC012494.1-201ENST00000439259 NUTM2GQ5VZR2 741 aa11.71□□□□□ -0.53
AC012494.1-201ENST00000439259 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
AC012494.1-201ENST00000439259 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.54
AC012494.1-201ENST00000439259 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.7□□□□□ -0.54
AC012494.1-201ENST00000439259 SNPHO15079 494 aa11.7□□□□□ -0.54
AC012494.1-201ENST00000439259 VPS72Q15906 364 aa11.7□□□□□ -0.54
AC012494.1-201ENST00000439259 SEPT12Q8IYM1 358 aa11.7□□□□□ -0.54
AC012494.1-201ENST00000439259 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
AC012494.1-201ENST00000439259 PLCH1Q4KWH8 1693 aa11.7□□□□□ -0.54
AC012494.1-201ENST00000439259 ALS2Q96Q42 1657 aa11.7□□□□□ -0.54
AC012494.1-201ENST00000439259 ACEP12821 1306 aa11.69□□□□□ -0.54
AC012494.1-201ENST00000439259 KIAA1210Q9ULL0 1709 aa11.69□□□□□ -0.54
AC012494.1-201ENST00000439259 CENPJQ9HC77 1338 aaPredicted RBP11.68□□□□□ -0.54
AC012494.1-201ENST00000439259 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
AC012494.1-201ENST00000439259 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
AC012494.1-201ENST00000439259 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
AC012494.1-201ENST00000439259 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
AC012494.1-201ENST00000439259 FAM98CQ17RN3 349 aaKnown RBP11.67□□□□□ -0.54
AC012494.1-201ENST00000439259 POLR3AO14802 1390 aaPredicted RBP11.67□□□□□ -0.54
AC012494.1-201ENST00000439259 A0A0G2JS52 829 aa11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 ONECUT3O60422 494 aaPredicted RBP11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 MYT1Q01538 1121 aa11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 PRDM11Q9NQV5 511 aa11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 NWD2Q9ULI1 1742 aa11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 KIAA0232Q92628 1395 aa11.66□□□□□ -0.54
AC012494.1-201ENST00000439259 BRWD3Q6RI45 1802 aa11.65□□□□□ -0.54
AC012494.1-201ENST00000439259 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
AC012494.1-201ENST00000439259 PPIP5K1Q6PFW1 1433 aa11.65□□□□□ -0.54
AC012494.1-201ENST00000439259 CRYBG1Q9Y4K1 1723 aa11.65□□□□□ -0.54
AC012494.1-201ENST00000439259 TOPAZ1Q8N9V7 1692 aa11.65□□□□□ -0.55
AC012494.1-201ENST00000439259 NRAPQ86VF7 1730 aa11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 G3V3G9 751 aa11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 FAM182BQ5T319 152 aa11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 KRT27Q7Z3Y8 459 aa11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 ABTB2Q8N961 1025 aa11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 CABP1Q9NZU7 370 aa11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 COL14A1Q05707 1796 aaKnown RBP11.64□□□□□ -0.55
AC012494.1-201ENST00000439259 TMEM121BQ9BXQ6 578 aaPredicted RBP11.63□□□□□ -0.55
AC012494.1-201ENST00000439259 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
AC012494.1-201ENST00000439259 ROCK2O75116 1388 aaKnown RBP11.63□□□□□ -0.55
AC012494.1-201ENST00000439259 SPATA31A5Q5VU36 1347 aa11.62□□□□□ -0.55
AC012494.1-201ENST00000439259 SPATA31A7Q8IWB4 1347 aa11.62□□□□□ -0.55
AC012494.1-201ENST00000439259 QRICH2Q9H0J4 1663 aa11.62□□□□□ -0.55
AC012494.1-201ENST00000439259 TRPM1Q7Z4N2 1603 aa11.62□□□□□ -0.55
AC012494.1-201ENST00000439259 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
AC012494.1-201ENST00000439259 BLMP54132 1417 aaPredicted RBP11.61□□□□□ -0.55
AC012494.1-201ENST00000439259 PHRF1Q9P1Y6 1649 aaKnown RBP11.61□□□□□ -0.55
AC012494.1-201ENST00000439259 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
AC012494.1-201ENST00000439259 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
AC012494.1-201ENST00000439259 USP19O94966 1318 aa11.6□□□□□ -0.55
AC012494.1-201ENST00000439259 SPATA31A1Q5TZJ5 1347 aa11.6□□□□□ -0.55
AC012494.1-201ENST00000439259 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
AC012494.1-201ENST00000439259 ZBTB7CA1YPR0 619 aa11.59□□□□□ -0.55
AC012494.1-201ENST00000439259 ST18O60284 1047 aa11.59□□□□□ -0.55
AC012494.1-201ENST00000439259 GCP02774 474 aa11.59□□□□□ -0.55
AC012494.1-201ENST00000439259 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
AC012494.1-201ENST00000439259 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
AC012494.1-201ENST00000439259 NRKQ7Z2Y5 1582 aa11.58□□□□□ -0.55
AC012494.1-201ENST00000439259 EVA1CP58658 441 aa11.58□□□□□ -0.56
AC012494.1-201ENST00000439259 NLRP6P59044 892 aa11.58□□□□□ -0.56
AC012494.1-201ENST00000439259 SF3B2Q13435 895 aaKnown RBP11.58□□□□□ -0.56
AC012494.1-201ENST00000439259 LARP1Q6PKG0 1096 aaKnown RBP11.58□□□□□ -0.56
AC012494.1-201ENST00000439259 NLRP13Q86W25 1043 aa11.58□□□□□ -0.56
AC012494.1-201ENST00000439259 USP6P35125 1406 aa11.58□□□□□ -0.56
AC012494.1-201ENST00000439259 CAMTA1Q9Y6Y1 1673 aa11.58□□□□□ -0.56
AC012494.1-201ENST00000439259 SOX12O15370 315 aa11.56□□□□□ -0.56
AC012494.1-201ENST00000439259 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms