RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
PCNX3-202ENST00000439247 GBP4Q96PP9 640 aa16.92■□□□□ 0.3
PCNX3-202ENST00000439247 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
PCNX3-202ENST00000439247 SNX21Q969T3 373 aa16.92■□□□□ 0.3
PCNX3-202ENST00000439247 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
PCNX3-202ENST00000439247 ARHGEF28Q8N1W1 1705 aaKnown RBP16.91■□□□□ 0.3
PCNX3-202ENST00000439247 ANKRD45Q5TZF3 282 aa16.91■□□□□ 0.3
PCNX3-202ENST00000439247 CHD1LQ86WJ1 897 aa16.91■□□□□ 0.3
PCNX3-202ENST00000439247 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
PCNX3-202ENST00000439247 RBM10P98175 930 aaKnown RBP16.9■□□□□ 0.3
PCNX3-202ENST00000439247 PRAM1Q96QH2 718 aa16.9■□□□□ 0.3
PCNX3-202ENST00000439247 ARHGAP23Q9P227 1491 aa16.9■□□□□ 0.3
PCNX3-202ENST00000439247 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
PCNX3-202ENST00000439247 ADAMTS13Q76LX8 1427 aa16.9■□□□□ 0.3
PCNX3-202ENST00000439247 SLIT1O75093 1534 aa16.9■□□□□ 0.3
PCNX3-202ENST00000439247 NASPP49321 788 aaPredicted RBP16.9■□□□□ 0.3
PCNX3-202ENST00000439247 QRICH2Q9H0J4 1663 aa16.89■□□□□ 0.29
PCNX3-202ENST00000439247 EID1Q9Y6B2 187 aa16.89■□□□□ 0.29
PCNX3-202ENST00000439247 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
PCNX3-202ENST00000439247 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
PCNX3-202ENST00000439247 KDM4FA0A1W2PPD8 638 aa16.88■□□□□ 0.29
PCNX3-202ENST00000439247 TBC1D9Q6ZT07 1266 aa16.88■□□□□ 0.29
PCNX3-202ENST00000439247 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
PCNX3-202ENST00000439247 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
PCNX3-202ENST00000439247 DDX49Q9Y6V7 483 aaKnown RBP16.88■□□□□ 0.29
PCNX3-202ENST00000439247 NCLP19338 710 aaKnown RBP16.87■□□□□ 0.29
PCNX3-202ENST00000439247 K7ELQ4 463 aaPredicted RBP16.87■□□□□ 0.29
PCNX3-202ENST00000439247 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
PCNX3-202ENST00000439247 PLEKHG1Q9ULL1 1385 aa16.87■□□□□ 0.29
PCNX3-202ENST00000439247 RIPK4P57078 832 aa16.87■□□□□ 0.29
PCNX3-202ENST00000439247 CHAMP1Q96JM3 812 aa16.87■□□□□ 0.29
PCNX3-202ENST00000439247 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
PCNX3-202ENST00000439247 PKP1Q13835 747 aa16.86■□□□□ 0.29
PCNX3-202ENST00000439247 CIZ1Q9ULV3 898 aaPredicted RBP16.86■□□□□ 0.29
PCNX3-202ENST00000439247 ARID3AQ99856 593 aa16.85■□□□□ 0.29
PCNX3-202ENST00000439247 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
PCNX3-202ENST00000439247 SKOR2Q2VWA4 1001 aaPredicted RBP16.85■□□□□ 0.29
PCNX3-202ENST00000439247 ELL2O00472 640 aaPredicted RBP16.84■□□□□ 0.29
PCNX3-202ENST00000439247 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
PCNX3-202ENST00000439247 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
PCNX3-202ENST00000439247 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
PCNX3-202ENST00000439247 BMP2KLQ5H9B9 411 aa16.84■□□□□ 0.29
PCNX3-202ENST00000439247 FBLN1P23142 703 aa16.83■□□□□ 0.29
PCNX3-202ENST00000439247 CCDC173Q0VFZ6 552 aa16.83■□□□□ 0.29
PCNX3-202ENST00000439247 CAVIN1Q6NZI2 390 aaKnown RBP16.83■□□□□ 0.29
PCNX3-202ENST00000439247 THUMPD2Q9BTF0 503 aaKnown RBP16.83■□□□□ 0.29
PCNX3-202ENST00000439247 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.29
PCNX3-202ENST00000439247 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.28
PCNX3-202ENST00000439247 ZNF142P52746 1687 aaPredicted RBP16.83■□□□□ 0.28
PCNX3-202ENST00000439247 TPM2P07951 284 aa16.83■□□□□ 0.28
PCNX3-202ENST00000439247 ZSCAN30Q86W11 494 aa16.83■□□□□ 0.28
PCNX3-202ENST00000439247 PPP1R9BQ96SB3 815 aa16.83■□□□□ 0.28
PCNX3-202ENST00000439247 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.28
PCNX3-202ENST00000439247 PTPRUQ92729 1446 aa16.83■□□□□ 0.28
PCNX3-202ENST00000439247 SIRT2Q8IXJ6 389 aa16.82■□□□□ 0.28
PCNX3-202ENST00000439247 MED14O60244 1454 aa16.82■□□□□ 0.28
PCNX3-202ENST00000439247 ADGRB2O60241 1585 aa16.81■□□□□ 0.28
PCNX3-202ENST00000439247 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
PCNX3-202ENST00000439247 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
PCNX3-202ENST00000439247 ABCC11Q96J66 1382 aa16.81■□□□□ 0.28
PCNX3-202ENST00000439247 MSNP26038 577 aaKnown RBP16.81■□□□□ 0.28
PCNX3-202ENST00000439247 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
PCNX3-202ENST00000439247 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
PCNX3-202ENST00000439247 ROBO2Q9HCK4 1378 aa16.81■□□□□ 0.28
PCNX3-202ENST00000439247 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
PCNX3-202ENST00000439247 ZBTB7BO15156 539 aaPredicted RBP16.8■□□□□ 0.28
PCNX3-202ENST00000439247 KLHL40Q2TBA0 621 aa16.8■□□□□ 0.28
PCNX3-202ENST00000439247 RBSNQ9H1K0 784 aa16.8■□□□□ 0.28
PCNX3-202ENST00000439247 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 TSPYL6Q8N831 410 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 FAM13BQ9NYF5 915 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 IPO8O15397 1037 aaKnown RBP16.79■□□□□ 0.28
PCNX3-202ENST00000439247 OFD1O75665 1012 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 PDCL3Q9H2J4 239 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 NCKAP5LQ9HCH0 1330 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 GOLGA6L22H0YM25 854 aa16.79■□□□□ 0.28
PCNX3-202ENST00000439247 GSPT1P15170 499 aaKnown RBP16.78■□□□□ 0.28
PCNX3-202ENST00000439247 HSPA2P54652 639 aa16.78■□□□□ 0.28
PCNX3-202ENST00000439247 ZSCAN23Q3MJ62 389 aa16.78■□□□□ 0.28
PCNX3-202ENST00000439247 FOXD4L5Q5VV16 416 aaPredicted RBP16.78■□□□□ 0.28
PCNX3-202ENST00000439247 C16orf71Q8IYS4 520 aaPredicted RBP16.78■□□□□ 0.28
PCNX3-202ENST00000439247 FOXD4L4Q8WXT5 416 aaPredicted RBP16.78■□□□□ 0.28
PCNX3-202ENST00000439247 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
PCNX3-202ENST00000439247 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
PCNX3-202ENST00000439247 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
PCNX3-202ENST00000439247 EVC2Q86UK5 1308 aa16.77■□□□□ 0.28
PCNX3-202ENST00000439247 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.27
PCNX3-202ENST00000439247 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.77■□□□□ 0.27
PCNX3-202ENST00000439247 ZGPATQ8N5A5 531 aaKnown RBP16.76■□□□□ 0.27
PCNX3-202ENST00000439247 TBX22Q9Y458 520 aa16.76■□□□□ 0.27
PCNX3-202ENST00000439247 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
PCNX3-202ENST00000439247 LMBRD1Q9NUN5 540 aa16.76■□□□□ 0.27
PCNX3-202ENST00000439247 DLC1Q96QB1 1528 aa16.76■□□□□ 0.27
PCNX3-202ENST00000439247 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
PCNX3-202ENST00000439247 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
PCNX3-202ENST00000439247 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
PCNX3-202ENST00000439247 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
PCNX3-202ENST00000439247 CALD1Q05682 793 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms