RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ITPKCQ96DU7 683 aa7.45□□□□□ -1.22
HMGB3P12-201ENST00000438745 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P12-201ENST00000438745 ESPNB1AK53 854 aa7.44□□□□□ -1.22
HMGB3P12-201ENST00000438745 APBB1O00213 710 aa7.44□□□□□ -1.22
HMGB3P12-201ENST00000438745 FBXO45P0C2W1 286 aa7.44□□□□□ -1.22
HMGB3P12-201ENST00000438745 FSHRP23945 695 aa7.44□□□□□ -1.22
HMGB3P12-201ENST00000438745 TMEM132AQ24JP5 1023 aa7.44□□□□□ -1.22
HMGB3P12-201ENST00000438745 SLC10A4Q96EP9 437 aa7.44□□□□□ -1.22
HMGB3P12-201ENST00000438745 NDUFB9Q9Y6M9 179 aa7.44□□□□□ -1.22
HMGB3P12-201ENST00000438745 ZIC2O95409 532 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P12-201ENST00000438745 NFX1Q12986 1120 aaKnown RBP7.43□□□□□ -1.22
HMGB3P12-201ENST00000438745 CCDC116Q8IYX3 515 aa7.43□□□□□ -1.22
HMGB3P12-201ENST00000438745 TRIM47Q96LD4 638 aa7.43□□□□□ -1.22
HMGB3P12-201ENST00000438745 ZFAND3Q9H8U3 227 aa7.43□□□□□ -1.22
HMGB3P12-201ENST00000438745 SENP2Q9HC62 589 aa7.43□□□□□ -1.22
HMGB3P12-201ENST00000438745 EMILIN1Q9Y6C2 1016 aa7.43□□□□□ -1.22
HMGB3P12-201ENST00000438745 WFS1O76024 890 aa7.42□□□□□ -1.22
HMGB3P12-201ENST00000438745 NR1H3Q13133 447 aa7.42□□□□□ -1.22
HMGB3P12-201ENST00000438745 INTS6LQ5JSJ4 861 aaKnown RBP7.42□□□□□ -1.22
HMGB3P12-201ENST00000438745 MCCD1P59942 119 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P12-201ENST00000438745 NBPF20Q3BBV1 942 aa7.41□□□□□ -1.22
HMGB3P12-201ENST00000438745 PPP1R26Q5T8A7 1209 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P12-201ENST00000438745 MRPL14Q6P1L8 145 aaKnown RBP7.41□□□□□ -1.22
HMGB3P12-201ENST00000438745 DZIP3Q86Y13 1208 aaKnown RBP7.41□□□□□ -1.22
HMGB3P12-201ENST00000438745 KIFC2Q96AC6 838 aa7.41□□□□□ -1.22
HMGB3P12-201ENST00000438745 BMP1P13497 986 aa7.4□□□□□ -1.22
HMGB3P12-201ENST00000438745 DHX9Q08211 1270 aaKnown RBP7.4□□□□□ -1.22
HMGB3P12-201ENST00000438745 IRF5Q13568 498 aa7.4□□□□□ -1.22
HMGB3P12-201ENST00000438745 Q6ZVU0 165 aa7.4□□□□□ -1.22
HMGB3P12-201ENST00000438745 SEPT12Q8IYM1 358 aa7.4□□□□□ -1.22
HMGB3P12-201ENST00000438745 TBC1D2BQ9UPU7 963 aa7.4□□□□□ -1.22
HMGB3P12-201ENST00000438745 MCM6Q14566 821 aa7.39□□□□□ -1.23
HMGB3P12-201ENST00000438745 ZFP42Q96MM3 310 aa7.39□□□□□ -1.23
HMGB3P12-201ENST00000438745 CCDC125Q86Z20 511 aa7.38□□□□□ -1.23
HMGB3P12-201ENST00000438745 MEIOBQ8N635 442 aa7.38□□□□□ -1.23
HMGB3P12-201ENST00000438745 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
HMGB3P12-201ENST00000438745 PGPEP1Q9NXJ5 209 aa7.38□□□□□ -1.23
HMGB3P12-201ENST00000438745 ERVH48-1M5A8F1 160 aa7.37□□□□□ -1.23
HMGB3P12-201ENST00000438745 GIGYF1O75420 1035 aaPredicted RBP7.37□□□□□ -1.23
HMGB3P12-201ENST00000438745 LILRA1O75019 489 aa7.36□□□□□ -1.23
HMGB3P12-201ENST00000438745 SCARF1Q14162 830 aa7.36□□□□□ -1.23
HMGB3P12-201ENST00000438745 ZNF592Q92610 1267 aa7.36□□□□□ -1.23
HMGB3P12-201ENST00000438745 ZNF330Q9Y3S2 320 aaPredicted RBP7.36□□□□□ -1.23
HMGB3P12-201ENST00000438745 PCDHB9Q9Y5E1 797 aa7.36□□□□□ -1.23
HMGB3P12-201ENST00000438745 TERTO14746 1132 aaKnown RBP7.35□□□□□ -1.23
HMGB3P12-201ENST00000438745 CBLBQ13191 982 aa7.35□□□□□ -1.23
HMGB3P12-201ENST00000438745 PURBQ96QR8 312 aaKnown RBP7.35□□□□□ -1.23
HMGB3P12-201ENST00000438745 TSEN34Q9BSV6 310 aaKnown RBP7.35□□□□□ -1.23
HMGB3P12-201ENST00000438745 GDPD2Q9HCC8 539 aa7.35□□□□□ -1.23
HMGB3P12-201ENST00000438745 TMPRSS4Q9NRS4 437 aa7.35□□□□□ -1.23
HMGB3P12-201ENST00000438745 ADD1P35611 737 aaKnown RBP7.34□□□□□ -1.23
HMGB3P12-201ENST00000438745 LINC00528Q8N1L1 170 aa7.34□□□□□ -1.23
HMGB3P12-201ENST00000438745 CEP126Q9P2H0 1117 aa7.34□□□□□ -1.23
HMGB3P12-201ENST00000438745 COG6Q9Y2V7 657 aa7.34□□□□□ -1.23
HMGB3P12-201ENST00000438745 FLIIQ13045 1269 aa7.33□□□□□ -1.24
HMGB3P12-201ENST00000438745 RNF20Q5VTR2 975 aa7.33□□□□□ -1.24
HMGB3P12-201ENST00000438745 KDF1Q8NAX2 398 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P12-201ENST00000438745 ZNF784Q8NCA9 323 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P12-201ENST00000438745 SOS2Q07890 1332 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P12-201ENST00000438745 SPINT1O43278 529 aa7.32□□□□□ -1.24
HMGB3P12-201ENST00000438745 VEGFBP49765 207 aa7.32□□□□□ -1.24
HMGB3P12-201ENST00000438745 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
HMGB3P12-201ENST00000438745 PHTF2Q8N3S3 785 aa7.32□□□□□ -1.24
HMGB3P12-201ENST00000438745 UPP2O95045 317 aa7.31□□□□□ -1.24
HMGB3P12-201ENST00000438745 BMP2P12643 396 aa7.31□□□□□ -1.24
HMGB3P12-201ENST00000438745 EIF4G2P78344 907 aaKnown RBP eCLIP7.31□□□□□ -1.24
HMGB3P12-201ENST00000438745 WIPF1O43516 503 aa7.3□□□□□ -1.24
HMGB3P12-201ENST00000438745 RAB15P59190 212 aa7.3□□□□□ -1.24
HMGB3P12-201ENST00000438745 ERVK-9P63128 1117 aa7.3□□□□□ -1.24
HMGB3P12-201ENST00000438745 C6orf118Q5T5N4 469 aa7.3□□□□□ -1.24
HMGB3P12-201ENST00000438745 TRIM52Q96A61 297 aa7.3□□□□□ -1.24
HMGB3P12-201ENST00000438745 CHIC2Q9UKJ5 165 aa7.3□□□□□ -1.24
HMGB3P12-201ENST00000438745 ADH1AP07327 375 aa7.29□□□□□ -1.24
HMGB3P12-201ENST00000438745 ABL2P42684 1182 aa7.29□□□□□ -1.24
HMGB3P12-201ENST00000438745 VAC14Q08AM6 782 aa7.29□□□□□ -1.24
HMGB3P12-201ENST00000438745 NPAS3Q8IXF0 933 aa7.29□□□□□ -1.24
HMGB3P12-201ENST00000438745 NXF1Q9UBU9 619 aaKnown RBP7.29□□□□□ -1.24
HMGB3P12-201ENST00000438745 SOBPA7XYQ1 873 aa7.28□□□□□ -1.24
HMGB3P12-201ENST00000438745 PTGIRP43119 386 aa7.28□□□□□ -1.24
HMGB3P12-201ENST00000438745 POM121Q96HA1 1249 aa7.28□□□□□ -1.24
HMGB3P12-201ENST00000438745 AGBL1Q96MI9 1066 aa7.28□□□□□ -1.24
HMGB3P12-201ENST00000438745 SOX11P35716 441 aa7.27□□□□□ -1.25
HMGB3P12-201ENST00000438745 CC2D2BQ6DHV5 1058 aa7.27□□□□□ -1.25
HMGB3P12-201ENST00000438745 CCDC85AQ96PX6 553 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P12-201ENST00000438745 DNMT3LQ9UJW3 386 aa7.27□□□□□ -1.25
HMGB3P12-201ENST00000438745 TTLL8A6PVC2 850 aa7.26□□□□□ -1.25
HMGB3P12-201ENST00000438745 TRAK2O60296 914 aa7.26□□□□□ -1.25
HMGB3P12-201ENST00000438745 RELBQ01201 579 aa7.26□□□□□ -1.25
HMGB3P12-201ENST00000438745 TSGA10IPQ3SY00 556 aa7.26□□□□□ -1.25
HMGB3P12-201ENST00000438745 CYLDQ9NQC7 956 aa7.26□□□□□ -1.25
HMGB3P12-201ENST00000438745 GMPRP36959 345 aa7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 CTSOP43234 321 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 SCTRP47872 440 aa7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 OSBPL3Q9H4L5 887 aa7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 ALG2Q9H553 416 aa7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 PCDHB11Q9Y5F2 797 aa7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 ERBB4Q15303 1308 aa7.25□□□□□ -1.25
HMGB3P12-201ENST00000438745 MAN1A2O60476 641 aa7.24□□□□□ -1.25
HMGB3P12-201ENST00000438745 INSM2Q96T92 566 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms