RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 APBA3O96018 575 aa25.98■■□□□ 1.75
GTF3A-204ENST00000438571 RGPD3A6NKT7 1758 aaPredicted RBP25.97■■□□□ 1.75
GTF3A-204ENST00000438571 RGPD4Q7Z3J3 1758 aa25.97■■□□□ 1.75
GTF3A-204ENST00000438571 KTN1Q86UP2 1357 aaKnown RBP25.95■■□□□ 1.75
GTF3A-204ENST00000438571 SBNO2Q9Y2G9 1366 aa25.95■■□□□ 1.75
GTF3A-204ENST00000438571 TTC21AQ8NDW8 1320 aa25.93■■□□□ 1.74
GTF3A-204ENST00000438571 TOM1L2Q6ZVM7 507 aa25.93■■□□□ 1.74
GTF3A-204ENST00000438571 ARHGEF25Q86VW2 580 aa25.93■■□□□ 1.74
GTF3A-204ENST00000438571 ZNF692Q9BU19 519 aaPredicted RBP25.93■■□□□ 1.74
GTF3A-204ENST00000438571 OVOS2A0A0G2JMS6 1433 aa25.93■■□□□ 1.74
GTF3A-204ENST00000438571 OVOS2A0A0J9YW53 1432 aa25.93■■□□□ 1.74
GTF3A-204ENST00000438571 OVOS2Q6IE36 1432 aa25.93■■□□□ 1.74
GTF3A-204ENST00000438571 WDR17Q8IZU2 1322 aa25.92■■□□□ 1.74
GTF3A-204ENST00000438571 CARD11Q9BXL7 1154 aa25.92■■□□□ 1.74
GTF3A-204ENST00000438571 PARD3Q8TEW0 1356 aa25.92■■□□□ 1.74
GTF3A-204ENST00000438571 ABCC6O95255 1503 aa25.89■■□□□ 1.74
GTF3A-204ENST00000438571 TONSLQ96HA7 1378 aa25.89■■□□□ 1.74
GTF3A-204ENST00000438571 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.87■■□□□ 1.73
GTF3A-204ENST00000438571 KCNH5Q8NCM2 988 aa25.87■■□□□ 1.73
GTF3A-204ENST00000438571 DDB1Q16531 1140 aa25.86■■□□□ 1.73
GTF3A-204ENST00000438571 PTF1AQ7RTS3 328 aa25.86■■□□□ 1.73
GTF3A-204ENST00000438571 NME9Q86XW9 330 aa25.86■■□□□ 1.73
GTF3A-204ENST00000438571 USP31Q70CQ4 1352 aa25.85■■□□□ 1.73
GTF3A-204ENST00000438571 MARCH10Q8NA82 808 aaPredicted RBP25.83■■□□□ 1.73
GTF3A-204ENST00000438571 KAT6BQ8WYB5 2073 aa25.83■■□□□ 1.72
GTF3A-204ENST00000438571 A0A1W2PP64 1363 aa25.82■■□□□ 1.72
GTF3A-204ENST00000438571 RGPD2P0DJD1 1756 aa25.82■■□□□ 1.72
GTF3A-204ENST00000438571 CASZ1Q86V15 1759 aa25.82■■□□□ 1.72
GTF3A-204ENST00000438571 CSB-PGBD3P0DP91 1061 aa25.82■■□□□ 1.72
GTF3A-204ENST00000438571 TMC1Q8TDI8 760 aa25.82■■□□□ 1.72
GTF3A-204ENST00000438571 SLC12A5Q9H2X9 1139 aa25.82■■□□□ 1.72
GTF3A-204ENST00000438571 NHSQ6T4R5 1651 aa25.81■■□□□ 1.72
GTF3A-204ENST00000438571 CARD10Q9BWT7 1032 aa25.81■■□□□ 1.72
GTF3A-204ENST00000438571 EDC4Q6P2E9 1401 aaKnown RBP25.8■■□□□ 1.72
GTF3A-204ENST00000438571 TNS2Q63HR2 1409 aa25.79■■□□□ 1.72
GTF3A-204ENST00000438571 FAM208AQ9UK61 1670 aaKnown RBP25.77■■□□□ 1.72
GTF3A-204ENST00000438571 BTAF1O14981 1849 aa25.77■■□□□ 1.72
GTF3A-204ENST00000438571 ERBB3P21860 1342 aa25.76■■□□□ 1.71
GTF3A-204ENST00000438571 CCDC7Q96M83 1385 aa25.76■■□□□ 1.71
GTF3A-204ENST00000438571 BCL9O00512 1426 aa25.76■■□□□ 1.71
GTF3A-204ENST00000438571 HDGFL2Q7Z4V5 671 aaPredicted RBP25.75■■□□□ 1.71
GTF3A-204ENST00000438571 TESK2Q96S53 571 aa25.75■■□□□ 1.71
GTF3A-204ENST00000438571 ANO8Q9HCE9 1232 aaPredicted RBP25.75■■□□□ 1.71
GTF3A-204ENST00000438571 C11orf95C9JLR9 678 aaPredicted RBP25.74■■□□□ 1.71
GTF3A-204ENST00000438571 NBPF14Q5TI25 921 aa25.74■■□□□ 1.71
GTF3A-204ENST00000438571 CDCA7Q9BWT1 371 aaPredicted RBP25.74■■□□□ 1.71
GTF3A-204ENST00000438571 BCL11BQ9C0K0 894 aaPredicted RBP25.73■■□□□ 1.71
GTF3A-204ENST00000438571 PLSCR1O15162 318 aa25.72■■□□□ 1.71
GTF3A-204ENST00000438571 SHANK3Q9BYB0 1731 aa25.71■■□□□ 1.71
GTF3A-204ENST00000438571 ST20-MTHFSA0A0A6YYL1 179 aa25.71■■□□□ 1.71
GTF3A-204ENST00000438571 KIF20BQ96Q89 1820 aa25.7■■□□□ 1.71
GTF3A-204ENST00000438571 PROM2Q8N271 834 aa25.7■■□□□ 1.7
GTF3A-204ENST00000438571 EXOC5O00471 708 aa25.69■■□□□ 1.7
GTF3A-204ENST00000438571 ANKRD24Q8TF21 1146 aa25.68■■□□□ 1.7
GTF3A-204ENST00000438571 NLRP2Q9NX02 1062 aa25.68■■□□□ 1.7
GTF3A-204ENST00000438571 TERF2IPQ9NYB0 399 aa25.68■■□□□ 1.7
GTF3A-204ENST00000438571 KCNQ2O43526 872 aa25.67■■□□□ 1.7
GTF3A-204ENST00000438571 MYOM1P52179 1685 aa25.67■■□□□ 1.7
GTF3A-204ENST00000438571 PAPPAQ13219 1627 aa25.66■■□□□ 1.7
GTF3A-204ENST00000438571 PUS7Q96PZ0 661 aaKnown RBP25.66■■□□□ 1.7
GTF3A-204ENST00000438571 PDGFDQ9GZP0 370 aaPredicted RBP25.66■■□□□ 1.7
GTF3A-204ENST00000438571 DOT1LQ8TEK3 1739 aa25.66■■□□□ 1.7
GTF3A-204ENST00000438571 FBLN1P23142 703 aa25.64■■□□□ 1.7
GTF3A-204ENST00000438571 ACSBG1Q96GR2 724 aa25.64■■□□□ 1.7
GTF3A-204ENST00000438571 NINLQ9Y2I6 1382 aa25.63■■□□□ 1.69
GTF3A-204ENST00000438571 IL2RBP14784 551 aa25.62■■□□□ 1.69
GTF3A-204ENST00000438571 TUBGCP6Q96RT7 1819 aa25.61■■□□□ 1.69
GTF3A-204ENST00000438571 TXNRD1Q16881 649 aa25.61■■□□□ 1.69
GTF3A-204ENST00000438571 SPON1Q9HCB6 807 aa25.61■■□□□ 1.69
GTF3A-204ENST00000438571 ANKRD36BQ8N2N9 1353 aa25.6■■□□□ 1.69
GTF3A-204ENST00000438571 USP47Q96K76 1375 aa25.6■■□□□ 1.69
GTF3A-204ENST00000438571 TRIM26Q12899 539 aaPredicted RBP25.6■■□□□ 1.69
GTF3A-204ENST00000438571 LTV1Q96GA3 475 aaPredicted RBP25.6■■□□□ 1.69
GTF3A-204ENST00000438571 IP6K1Q92551 441 aa25.59■■□□□ 1.69
GTF3A-204ENST00000438571 MAP3K19Q56UN5 1328 aa25.59■■□□□ 1.69
GTF3A-204ENST00000438571 LY75O60449 1722 aa25.55■■□□□ 1.68
GTF3A-204ENST00000438571 COG3Q96JB2 828 aa25.55■■□□□ 1.68
GTF3A-204ENST00000438571 MEGF6O75095 1541 aa25.54■■□□□ 1.68
GTF3A-204ENST00000438571 ZBTB7AO95365 584 aa25.54■■□□□ 1.68
GTF3A-204ENST00000438571 HOXC9P31274 260 aa25.54■■□□□ 1.68
GTF3A-204ENST00000438571 PPP1R1BQ9UD71 204 aaPredicted RBP25.54■■□□□ 1.68
GTF3A-204ENST00000438571 QSER1Q2KHR3 1735 aa25.54■■□□□ 1.68
GTF3A-204ENST00000438571 SLC15A2Q16348 729 aa25.52■■□□□ 1.68
GTF3A-204ENST00000438571 STK32BQ9NY57 414 aa25.52■■□□□ 1.68
GTF3A-204ENST00000438571 GGNBP2Q9H3C7 697 aa25.51■■□□□ 1.67
GTF3A-204ENST00000438571 RRS1Q15050 365 aaKnown RBP25.5■■□□□ 1.67
GTF3A-204ENST00000438571 AMPHP49418 695 aa25.49■■□□□ 1.67
GTF3A-204ENST00000438571 TMF1P82094 1093 aa25.49■■□□□ 1.67
GTF3A-204ENST00000438571 FYB1O15117 783 aa25.48■■□□□ 1.67
GTF3A-204ENST00000438571 PTGER2P43116 358 aa25.48■■□□□ 1.67
GTF3A-204ENST00000438571 DDX54Q8TDD1 881 aaKnown RBP25.48■■□□□ 1.67
GTF3A-204ENST00000438571 ATF5Q9Y2D1 282 aaPredicted RBP25.48■■□□□ 1.67
GTF3A-204ENST00000438571 MAP2P11137 1827 aaKnown RBP25.48■■□□□ 1.67
GTF3A-204ENST00000438571 RTL1A6NKG5 1358 aa25.47■■□□□ 1.67
GTF3A-204ENST00000438571 ANKRD26Q9UPS8 1709 aa25.47■■□□□ 1.67
GTF3A-204ENST00000438571 ZNF827Q17R98 1081 aa25.46■■□□□ 1.67
GTF3A-204ENST00000438571 LRRC4BQ9NT99 713 aa25.46■■□□□ 1.67
GTF3A-204ENST00000438571 SLC24A1O60721 1099 aa25.45■■□□□ 1.66
GTF3A-204ENST00000438571 COL24A1Q17RW2 1714 aa25.45■■□□□ 1.66
GTF3A-204ENST00000438571 NSD2O96028 1365 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms