RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ATP10BO94823 1461 aa18.86■□□□□ 0.61
NEDD4-202ENST00000435532 HSP90AB3PQ58FF7 597 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 CDC45O75419 566 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 ANKRD20A12PQ8NF67 263 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 CNKSR2Q8WXI2 1034 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 TMOD2Q9NZR1 351 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 LNPKQ9C0E8 428 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 NPHP3Q7Z494 1330 aa18.85■□□□□ 0.61
NEDD4-202ENST00000435532 PANK1Q8TE04 598 aa18.84■□□□□ 0.61
NEDD4-202ENST00000435532 TEX13AQ9BXU3 409 aaPredicted RBP18.83■□□□□ 0.61
NEDD4-202ENST00000435532 ZNF428Q96B54 188 aa18.83■□□□□ 0.6
NEDD4-202ENST00000435532 SMC3Q9UQE7 1217 aa18.83■□□□□ 0.6
NEDD4-202ENST00000435532 ADGRF5Q8IZF2 1346 aa18.82■□□□□ 0.6
NEDD4-202ENST00000435532 ABCC10Q5T3U5 1492 aa18.82■□□□□ 0.6
NEDD4-202ENST00000435532 GCC1Q96CN9 775 aa18.82■□□□□ 0.6
NEDD4-202ENST00000435532 NAP1L5Q96NT1 182 aaPredicted RBP18.82■□□□□ 0.6
NEDD4-202ENST00000435532 C14orf93Q9H972 538 aaKnown RBP18.82■□□□□ 0.6
NEDD4-202ENST00000435532 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
NEDD4-202ENST00000435532 R3HCC1Q9Y3T6 440 aaKnown RBP18.82■□□□□ 0.6
NEDD4-202ENST00000435532 RBM19Q9Y4C8 960 aaKnown RBP18.82■□□□□ 0.6
NEDD4-202ENST00000435532 GPATCH8Q9UKJ3 1502 aaKnown RBP18.82■□□□□ 0.6
NEDD4-202ENST00000435532 NOB1Q9ULX3 412 aaKnown RBP18.81■□□□□ 0.6
NEDD4-202ENST00000435532 GOLGA6L19H0YKK7 550 aa18.81■□□□□ 0.6
NEDD4-202ENST00000435532 GZF1Q9H116 711 aaPredicted RBP18.81■□□□□ 0.6
NEDD4-202ENST00000435532 AK7Q96M32 723 aa18.81■□□□□ 0.6
NEDD4-202ENST00000435532 CEP126Q9P2H0 1117 aa18.81■□□□□ 0.6
NEDD4-202ENST00000435532 WDHD1O75717 1129 aaPredicted RBP18.81■□□□□ 0.6
NEDD4-202ENST00000435532 NME9Q86XW9 330 aa18.8■□□□□ 0.6
NEDD4-202ENST00000435532 A0A087WZG4 1122 aa18.8■□□□□ 0.6
NEDD4-202ENST00000435532 WWC2Q6AWC2 1192 aa18.8■□□□□ 0.6
NEDD4-202ENST00000435532 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
NEDD4-202ENST00000435532 MTMR7Q9Y216 660 aa18.8■□□□□ 0.6
NEDD4-202ENST00000435532 WDR62O43379 1518 aa18.79■□□□□ 0.6
NEDD4-202ENST00000435532 SCAF11Q99590 1463 aaKnown RBP18.79■□□□□ 0.6
NEDD4-202ENST00000435532 BECN2A8MW95 431 aa18.79■□□□□ 0.6
NEDD4-202ENST00000435532 IPO9Q96P70 1041 aaKnown RBP18.79■□□□□ 0.6
NEDD4-202ENST00000435532 TSR2Q969E8 191 aaKnown RBP18.79■□□□□ 0.6
NEDD4-202ENST00000435532 NSD2O96028 1365 aa18.79■□□□□ 0.6
NEDD4-202ENST00000435532 TAF7Q15545 349 aaPredicted RBP18.79■□□□□ 0.6
NEDD4-202ENST00000435532 RIMS2Q9UQ26 1411 aa18.79■□□□□ 0.6
NEDD4-202ENST00000435532 PTCD1O75127 700 aaKnown RBP18.79■□□□□ 0.6
NEDD4-202ENST00000435532 AMER1Q5JTC6 1135 aaPredicted RBP18.78■□□□□ 0.6
NEDD4-202ENST00000435532 SKOR2Q2VWA4 1001 aaPredicted RBP18.78■□□□□ 0.6
NEDD4-202ENST00000435532 KRI1Q8N9T8 703 aaKnown RBP18.78■□□□□ 0.6
NEDD4-202ENST00000435532 UGGT2Q9NYU1 1516 aa18.78■□□□□ 0.6
NEDD4-202ENST00000435532 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
NEDD4-202ENST00000435532 EIF4G3O43432 1585 aaKnown RBP18.78■□□□□ 0.6
NEDD4-202ENST00000435532 PDE4AP27815 886 aa18.77■□□□□ 0.6
NEDD4-202ENST00000435532 IFNL2Q8IZJ0 200 aa18.77■□□□□ 0.6
NEDD4-202ENST00000435532 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
NEDD4-202ENST00000435532 LRRCC1Q9C099 1032 aa18.77■□□□□ 0.6
NEDD4-202ENST00000435532 BCL11BQ9C0K0 894 aaPredicted RBP18.77■□□□□ 0.6
NEDD4-202ENST00000435532 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
NEDD4-202ENST00000435532 KIAA0556O60303 1618 aa18.77■□□□□ 0.6
NEDD4-202ENST00000435532 PDE3AQ14432 1141 aa18.77■□□□□ 0.6
NEDD4-202ENST00000435532 KIF21AQ7Z4S6 1674 aa18.76■□□□□ 0.59
NEDD4-202ENST00000435532 GOLGA6L3A6NEY3 463 aa18.76■□□□□ 0.59
NEDD4-202ENST00000435532 ATP2B2Q01814 1243 aa18.76■□□□□ 0.59
NEDD4-202ENST00000435532 ZSCAN29Q8IWY8 852 aaPredicted RBP18.76■□□□□ 0.59
NEDD4-202ENST00000435532 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
NEDD4-202ENST00000435532 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
NEDD4-202ENST00000435532 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
NEDD4-202ENST00000435532 SIL1Q9H173 461 aa18.76■□□□□ 0.59
NEDD4-202ENST00000435532 RRP12Q5JTH9 1297 aaKnown RBP18.76■□□□□ 0.59
NEDD4-202ENST00000435532 AKAP2Q9Y2D5 859 aa18.75■□□□□ 0.59
NEDD4-202ENST00000435532 CTTNBP2Q8WZ74 1663 aa18.75■□□□□ 0.59
NEDD4-202ENST00000435532 CAVIN4Q5BKX8 364 aa18.74■□□□□ 0.59
NEDD4-202ENST00000435532 BICD2Q8TD16 824 aa18.74■□□□□ 0.59
NEDD4-202ENST00000435532 RAI14Q9P0K7 980 aa18.74■□□□□ 0.59
NEDD4-202ENST00000435532 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
NEDD4-202ENST00000435532 VPS37CA5D8V6 355 aaPredicted RBP18.74■□□□□ 0.59
NEDD4-202ENST00000435532 USHBP1Q8N6Y0 703 aa18.74■□□□□ 0.59
NEDD4-202ENST00000435532 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.74■□□□□ 0.59
NEDD4-202ENST00000435532 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
NEDD4-202ENST00000435532 SLC4A3P48751 1232 aa18.74■□□□□ 0.59
NEDD4-202ENST00000435532 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
NEDD4-202ENST00000435532 ACEP12821 1306 aa18.73■□□□□ 0.59
NEDD4-202ENST00000435532 IFT57Q9NWB7 429 aa18.73■□□□□ 0.59
NEDD4-202ENST00000435532 ABCC11Q96J66 1382 aa18.73■□□□□ 0.59
NEDD4-202ENST00000435532 PDE4CQ08493 712 aa18.73■□□□□ 0.59
NEDD4-202ENST00000435532 UHRF1BP1Q6BDS2 1440 aa18.73■□□□□ 0.59
NEDD4-202ENST00000435532 ANKRD24Q8TF21 1146 aa18.73■□□□□ 0.59
NEDD4-202ENST00000435532 IFIT1P09914 478 aaKnown RBP18.72■□□□□ 0.59
NEDD4-202ENST00000435532 TMEM132AQ24JP5 1023 aa18.72■□□□□ 0.59
NEDD4-202ENST00000435532 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.59
NEDD4-202ENST00000435532 C19orf44Q9H6X5 657 aa18.71■□□□□ 0.59
NEDD4-202ENST00000435532 NUP153P49790 1475 aaKnown RBP18.71■□□□□ 0.59
NEDD4-202ENST00000435532 METTL24Q5JXM2 366 aa18.71■□□□□ 0.59
NEDD4-202ENST00000435532 CCDC73Q6ZRK6 1079 aa18.71■□□□□ 0.59
NEDD4-202ENST00000435532 LRP2BPQ9P2M1 347 aa18.71■□□□□ 0.59
NEDD4-202ENST00000435532 ZNF287Q9HBT7 754 aa18.71■□□□□ 0.59
NEDD4-202ENST00000435532 IPO7O95373 1038 aaKnown RBP18.71■□□□□ 0.58
NEDD4-202ENST00000435532 HYPKQ9NX55 129 aa18.71■□□□□ 0.58
NEDD4-202ENST00000435532 ANKIB1Q9P2G1 1089 aa18.71■□□□□ 0.58
NEDD4-202ENST00000435532 ATF7IPQ6VMQ6 1270 aa18.7■□□□□ 0.58
NEDD4-202ENST00000435532 C8orf37Q96NL8 207 aa18.7■□□□□ 0.58
NEDD4-202ENST00000435532 SRGAP3O43295 1099 aa18.7■□□□□ 0.58
NEDD4-202ENST00000435532 DDX49Q9Y6V7 483 aaKnown RBP18.7■□□□□ 0.58
NEDD4-202ENST00000435532 AACSQ86V21 672 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms