RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 KIF13AQ9H1H9 1805 aa31.51■■■□□ 2.63
LMBR1-209ENST00000434453 ZNF853P0CG23 659 aa31.5■■■□□ 2.63
LMBR1-209ENST00000434453 ITSN1Q15811 1721 aa31.5■■■□□ 2.63
LMBR1-209ENST00000434453 CCDC61Q9Y6R9 512 aa31.49■■■□□ 2.63
LMBR1-209ENST00000434453 SIRT1Q96EB6 747 aa31.49■■■□□ 2.63
LMBR1-209ENST00000434453 ANTXR1Q9H6X2 564 aa31.48■■■□□ 2.63
LMBR1-209ENST00000434453 RRS1Q15050 365 aaKnown RBP31.48■■■□□ 2.63
LMBR1-209ENST00000434453 MRPL50Q8N5N7 158 aaKnown RBP31.48■■■□□ 2.63
LMBR1-209ENST00000434453 TBC1D2Q9BYX2 928 aa31.48■■■□□ 2.63
LMBR1-209ENST00000434453 IFT57Q9NWB7 429 aa31.47■■■□□ 2.63
LMBR1-209ENST00000434453 PRR36Q9H6K5 1346 aa31.47■■■□□ 2.63
LMBR1-209ENST00000434453 MBIPQ9NS73 344 aa31.47■■■□□ 2.63
LMBR1-209ENST00000434453 PTCH1Q13635 1447 aa31.46■■■□□ 2.63
LMBR1-209ENST00000434453 COG3Q96JB2 828 aa31.45■■■□□ 2.63
LMBR1-209ENST00000434453 PIK3R4Q99570 1358 aa31.45■■■□□ 2.63
LMBR1-209ENST00000434453 GNAI1P63096 354 aa31.45■■■□□ 2.62
LMBR1-209ENST00000434453 NUCB1Q02818 461 aa31.45■■■□□ 2.62
LMBR1-209ENST00000434453 SLKQ9H2G2 1235 aaPredicted RBP31.45■■■□□ 2.62
LMBR1-209ENST00000434453 CALD1Q05682 793 aaKnown RBP31.44■■■□□ 2.62
LMBR1-209ENST00000434453 UBR1Q8IWV7 1749 aa31.43■■■□□ 2.62
LMBR1-209ENST00000434453 ZBTB7BO15156 539 aaPredicted RBP31.43■■■□□ 2.62
LMBR1-209ENST00000434453 ARHGAP45Q92619 1136 aa31.43■■■□□ 2.62
LMBR1-209ENST00000434453 ROBO2Q9HCK4 1378 aa31.41■■■□□ 2.62
LMBR1-209ENST00000434453 NRKQ7Z2Y5 1582 aa31.4■■■□□ 2.62
LMBR1-209ENST00000434453 ELL2O00472 640 aaPredicted RBP31.4■■■□□ 2.62
LMBR1-209ENST00000434453 IL27Q8NEV9 243 aa31.4■■■□□ 2.62
LMBR1-209ENST00000434453 TNRQ92752 1358 aa31.39■■■□□ 2.62
LMBR1-209ENST00000434453 MFAP1P55081 439 aaKnown RBP31.39■■■□□ 2.62
LMBR1-209ENST00000434453 C22orf23Q9BZE7 217 aa31.39■■■□□ 2.62
LMBR1-209ENST00000434453 TMEM2Q9UHN6 1383 aa31.39■■■□□ 2.62
LMBR1-209ENST00000434453 CFAP44Q96MT7 982 aa31.39■■■□□ 2.61
LMBR1-209ENST00000434453 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.38■■■□□ 2.61
LMBR1-209ENST00000434453 FAM83GA6ND36 823 aa31.38■■■□□ 2.61
LMBR1-209ENST00000434453 LNPKQ9C0E8 428 aa31.38■■■□□ 2.61
LMBR1-209ENST00000434453 C8orf58Q8NAV2 365 aa31.37■■■□□ 2.61
LMBR1-209ENST00000434453 ESF1Q9H501 851 aaKnown RBP31.37■■■□□ 2.61
LMBR1-209ENST00000434453 ABCC4O15439 1325 aa31.37■■■□□ 2.61
LMBR1-209ENST00000434453 ADAMTS13Q76LX8 1427 aa31.37■■■□□ 2.61
LMBR1-209ENST00000434453 CHD1LQ86WJ1 897 aa31.36■■■□□ 2.61
LMBR1-209ENST00000434453 ZNF692Q9BU19 519 aaPredicted RBP31.36■■■□□ 2.61
LMBR1-209ENST00000434453 HDGFP51858 240 aaKnown RBP31.36■■■□□ 2.61
LMBR1-209ENST00000434453 TWISTNBQ3B726 338 aaPredicted RBP31.36■■■□□ 2.61
LMBR1-209ENST00000434453 TOPAZ1Q8N9V7 1692 aa31.35■■■□□ 2.61
LMBR1-209ENST00000434453 LMOD3Q0VAK6 560 aa31.34■■■□□ 2.61
LMBR1-209ENST00000434453 C1orf115Q9H7X2 142 aa31.34■■■□□ 2.61
LMBR1-209ENST00000434453 DCTN1Q14203 1278 aa31.33■■■□□ 2.61
LMBR1-209ENST00000434453 SIRT2Q8IXJ6 389 aa31.32■■■□□ 2.6
LMBR1-209ENST00000434453 AEBP1Q8IUX7 1158 aa31.31■■■□□ 2.6
LMBR1-209ENST00000434453 EIF4A2Q14240 407 aaKnown RBP31.29■■■□□ 2.6
LMBR1-209ENST00000434453 TTC21BQ7Z4L5 1316 aa31.29■■■□□ 2.6
LMBR1-209ENST00000434453 OVOS2A0A0J9YW53 1432 aa31.29■■■□□ 2.6
LMBR1-209ENST00000434453 OVOS2Q6IE36 1432 aa31.29■■■□□ 2.6
LMBR1-209ENST00000434453 PEAK1Q9H792 1746 aa31.28■■■□□ 2.6
LMBR1-209ENST00000434453 NALCNQ8IZF0 1738 aa31.28■■■□□ 2.6
LMBR1-209ENST00000434453 GCC1Q96CN9 775 aa31.27■■■□□ 2.6
LMBR1-209ENST00000434453 ACEP12821 1306 aa31.26■■■□□ 2.6
LMBR1-209ENST00000434453 CHMP4BQ9H444 224 aaKnown RBP31.26■■■□□ 2.6
LMBR1-209ENST00000434453 BRPF3Q9ULD4 1205 aa31.26■■■□□ 2.59
LMBR1-209ENST00000434453 ANKRD45Q5TZF3 282 aa31.25■■■□□ 2.59
LMBR1-209ENST00000434453 RGPD1P0DJD0 1748 aa31.25■■■□□ 2.59
LMBR1-209ENST00000434453 LTKP29376 864 aa31.25■■■□□ 2.59
LMBR1-209ENST00000434453 BMP2KLQ5H9B9 411 aa31.25■■■□□ 2.59
LMBR1-209ENST00000434453 SULT6B1Q6IMI4 303 aa31.24■■■□□ 2.59
LMBR1-209ENST00000434453 PLEKHG3A1L390 1219 aa31.23■■■□□ 2.59
LMBR1-209ENST00000434453 SPRYD3Q8NCJ5 442 aa31.23■■■□□ 2.59
LMBR1-209ENST00000434453 RBM25P49756 843 aaKnown RBP31.22■■■□□ 2.59
LMBR1-209ENST00000434453 USP6P35125 1406 aa31.22■■■□□ 2.59
LMBR1-209ENST00000434453 PLEKHG1Q9ULL1 1385 aa31.22■■■□□ 2.59
LMBR1-209ENST00000434453 API5Q9BZZ5 524 aaKnown RBP31.21■■■□□ 2.59
LMBR1-209ENST00000434453 NUTM2FA1L443 756 aa31.21■■■□□ 2.59
LMBR1-209ENST00000434453 PTPRUQ92729 1446 aa31.2■■■□□ 2.59
LMBR1-209ENST00000434453 KRT24Q2M2I5 525 aa31.19■■■□□ 2.58
LMBR1-209ENST00000434453 HSP90AB2PQ58FF8 381 aa31.18■■■□□ 2.58
LMBR1-209ENST00000434453 SSH2Q76I76 1423 aa31.18■■■□□ 2.58
LMBR1-209ENST00000434453 USP31Q70CQ4 1352 aa31.17■■■□□ 2.58
LMBR1-209ENST00000434453 RGS12O14924 1447 aa31.17■■■□□ 2.58
LMBR1-209ENST00000434453 KIF24Q5T7B8 1368 aa31.17■■■□□ 2.58
LMBR1-209ENST00000434453 CHL1O00533 1208 aa31.17■■■□□ 2.58
LMBR1-209ENST00000434453 MCM10Q7L590 875 aa31.15■■■□□ 2.58
LMBR1-209ENST00000434453 INTS3Q68E01 1043 aaKnown RBP31.13■■■□□ 2.57
LMBR1-209ENST00000434453 NCOA3Q9Y6Q9 1424 aa31.13■■■□□ 2.57
LMBR1-209ENST00000434453 FMN2Q9NZ56 1722 aa31.13■■■□□ 2.57
LMBR1-209ENST00000434453 SLC26A8Q96RN1 970 aa31.12■■■□□ 2.57
LMBR1-209ENST00000434453 KIF2CQ99661 725 aa31.12■■■□□ 2.57
LMBR1-209ENST00000434453 RTN4Q9NQC3 1192 aaKnown RBP31.11■■■□□ 2.57
LMBR1-209ENST00000434453 CHMP5Q9NZZ3 219 aa31.11■■■□□ 2.57
LMBR1-209ENST00000434453 TBC1D9Q6ZT07 1266 aa31.1■■■□□ 2.57
LMBR1-209ENST00000434453 HSCBQ8IWL3 235 aa31.1■■■□□ 2.57
LMBR1-209ENST00000434453 KIAA0232Q92628 1395 aa31.1■■■□□ 2.57
LMBR1-209ENST00000434453 SNX21Q969T3 373 aa31.1■■■□□ 2.57
LMBR1-209ENST00000434453 RGPD8O14715 1765 aaPredicted RBP31.1■■■□□ 2.57
LMBR1-209ENST00000434453 CRB1P82279 1406 aa31.1■■■□□ 2.57
LMBR1-209ENST00000434453 ATP10DQ9P241 1426 aa31.1■■■□□ 2.57
LMBR1-209ENST00000434453 RIMS1Q86UR5 1692 aaKnown RBP31.09■■■□□ 2.57
LMBR1-209ENST00000434453 DDIT3P35638 169 aa31.08■■■□□ 2.57
LMBR1-209ENST00000434453 MCM4P33991 863 aa31.08■■■□□ 2.57
LMBR1-209ENST00000434453 CEBPAP49715 358 aaPredicted RBP31.08■■■□□ 2.57
LMBR1-209ENST00000434453 DCTPP1Q9H773 170 aa31.07■■■□□ 2.56
LMBR1-209ENST00000434453 SOX12O15370 315 aa31.06■■■□□ 2.56
LMBR1-209ENST00000434453 MAP3K19Q56UN5 1328 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms