RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 SLIT3O75094 1523 aa21.72■■□□□ 1.07
RPL28-204ENST00000431533 PLSCR1O15162 318 aa21.72■■□□□ 1.07
RPL28-204ENST00000431533 WDR17Q8IZU2 1322 aa21.71■■□□□ 1.07
RPL28-204ENST00000431533 NUP188Q5SRE5 1749 aa21.7■■□□□ 1.06
RPL28-204ENST00000431533 TTC21AQ8NDW8 1320 aa21.7■■□□□ 1.06
RPL28-204ENST00000431533 KCNQ2O43526 872 aa21.69■■□□□ 1.06
RPL28-204ENST00000431533 CSB-PGBD3P0DP91 1061 aa21.69■■□□□ 1.06
RPL28-204ENST00000431533 BCL11BQ9C0K0 894 aaPredicted RBP21.69■■□□□ 1.06
RPL28-204ENST00000431533 TTC21BQ7Z4L5 1316 aa21.68■■□□□ 1.06
RPL28-204ENST00000431533 ARHGEF25Q86VW2 580 aa21.67■■□□□ 1.06
RPL28-204ENST00000431533 CPSF1Q10570 1443 aaKnown RBP21.66■■□□□ 1.06
RPL28-204ENST00000431533 CARD10Q9BWT7 1032 aa21.66■■□□□ 1.06
RPL28-204ENST00000431533 RGPD3A6NKT7 1758 aaPredicted RBP21.65■■□□□ 1.06
RPL28-204ENST00000431533 RGPD4Q7Z3J3 1758 aa21.65■■□□□ 1.06
RPL28-204ENST00000431533 AKAP12Q02952 1782 aa21.64■■□□□ 1.06
RPL28-204ENST00000431533 SBNO2Q9Y2G9 1366 aa21.64■■□□□ 1.06
RPL28-204ENST00000431533 PIK3C2AO00443 1686 aa21.64■■□□□ 1.05
RPL28-204ENST00000431533 EXOC5O00471 708 aa21.64■■□□□ 1.05
RPL28-204ENST00000431533 AXIN2Q9Y2T1 843 aa21.64■■□□□ 1.05
RPL28-204ENST00000431533 BCL9O00512 1426 aa21.63■■□□□ 1.05
RPL28-204ENST00000431533 LRRC37A3O60309 1634 aa21.63■■□□□ 1.05
RPL28-204ENST00000431533 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
RPL28-204ENST00000431533 PEAK1Q9H792 1746 aa21.63■■□□□ 1.05
RPL28-204ENST00000431533 KTN1Q86UP2 1357 aaKnown RBP21.62■■□□□ 1.05
RPL28-204ENST00000431533 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
RPL28-204ENST00000431533 NINLQ9Y2I6 1382 aa21.62■■□□□ 1.05
RPL28-204ENST00000431533 COL18A1P39060 1754 aa21.62■■□□□ 1.05
RPL28-204ENST00000431533 SOX12O15370 315 aa21.62■■□□□ 1.05
RPL28-204ENST00000431533 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
RPL28-204ENST00000431533 MARCH10Q8NA82 808 aaPredicted RBP21.61■■□□□ 1.05
RPL28-204ENST00000431533 SBF2Q86WG5 1849 aa21.61■■□□□ 1.05
RPL28-204ENST00000431533 ST20-MTHFSA0A0A6YYL1 179 aa21.6■■□□□ 1.05
RPL28-204ENST00000431533 YY1P25490 414 aa21.6■■□□□ 1.05
RPL28-204ENST00000431533 TMC1Q8TDI8 760 aa21.59■■□□□ 1.05
RPL28-204ENST00000431533 STK32BQ9NY57 414 aa21.58■■□□□ 1.05
RPL28-204ENST00000431533 ABCC6O95255 1503 aa21.58■■□□□ 1.04
RPL28-204ENST00000431533 WNK3Q9BYP7 1800 aa21.57■■□□□ 1.04
RPL28-204ENST00000431533 MON2Q7Z3U7 1717 aa21.57■■□□□ 1.04
RPL28-204ENST00000431533 USP47Q96K76 1375 aa21.56■■□□□ 1.04
RPL28-204ENST00000431533 HDGFL2Q7Z4V5 671 aaPredicted RBP21.55■■□□□ 1.04
RPL28-204ENST00000431533 TXNRD1Q16881 649 aa21.54■■□□□ 1.04
RPL28-204ENST00000431533 TIMELESSQ9UNS1 1208 aa21.54■■□□□ 1.04
RPL28-204ENST00000431533 USP31Q70CQ4 1352 aa21.53■■□□□ 1.04
RPL28-204ENST00000431533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.53■■□□□ 1.04
RPL28-204ENST00000431533 TESK2Q96S53 571 aa21.53■■□□□ 1.04
RPL28-204ENST00000431533 RGPD5Q99666 1765 aa21.53■■□□□ 1.04
RPL28-204ENST00000431533 NFAT5O94916 1531 aa21.52■■□□□ 1.04
RPL28-204ENST00000431533 PROM2Q8N271 834 aa21.52■■□□□ 1.04
RPL28-204ENST00000431533 SLC12A5Q9H2X9 1139 aa21.52■■□□□ 1.04
RPL28-204ENST00000431533 ANO8Q9HCE9 1232 aaPredicted RBP21.52■■□□□ 1.04
RPL28-204ENST00000431533 NLRP2Q9NX02 1062 aa21.52■■□□□ 1.04
RPL28-204ENST00000431533 SLC15A2Q16348 729 aa21.51■■□□□ 1.03
RPL28-204ENST00000431533 PTF1AQ7RTS3 328 aa21.51■■□□□ 1.03
RPL28-204ENST00000431533 TERF2IPQ9NYB0 399 aa21.51■■□□□ 1.03
RPL28-204ENST00000431533 TNS2Q63HR2 1409 aa21.51■■□□□ 1.03
RPL28-204ENST00000431533 IL2RBP14784 551 aa21.5■■□□□ 1.03
RPL28-204ENST00000431533 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
RPL28-204ENST00000431533 ERBB3P21860 1342 aa21.49■■□□□ 1.03
RPL28-204ENST00000431533 ZBTB7AO95365 584 aa21.48■■□□□ 1.03
RPL28-204ENST00000431533 CASZ1Q86V15 1759 aa21.48■■□□□ 1.03
RPL28-204ENST00000431533 SLC24A1O60721 1099 aa21.47■■□□□ 1.03
RPL28-204ENST00000431533 PUS7Q96PZ0 661 aaKnown RBP21.47■■□□□ 1.03
RPL28-204ENST00000431533 TMF1P82094 1093 aa21.46■■□□□ 1.03
RPL28-204ENST00000431533 NME9Q86XW9 330 aa21.46■■□□□ 1.03
RPL28-204ENST00000431533 MTFR1LQ9H019 292 aa21.46■■□□□ 1.03
RPL28-204ENST00000431533 A0A1W2PP64 1363 aa21.46■■□□□ 1.03
RPL28-204ENST00000431533 ANKRD24Q8TF21 1146 aa21.45■■□□□ 1.02
RPL28-204ENST00000431533 ATF5Q9Y2D1 282 aaPredicted RBP21.45■■□□□ 1.02
RPL28-204ENST00000431533 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
RPL28-204ENST00000431533 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
RPL28-204ENST00000431533 ACSBG1Q96GR2 724 aa21.43■■□□□ 1.02
RPL28-204ENST00000431533 NHSQ6T4R5 1651 aa21.43■■□□□ 1.02
RPL28-204ENST00000431533 PTGER2P43116 358 aa21.42■■□□□ 1.02
RPL28-204ENST00000431533 PDGFDQ9GZP0 370 aaPredicted RBP21.42■■□□□ 1.02
RPL28-204ENST00000431533 LTN1O94822 1766 aa21.41■■□□□ 1.02
RPL28-204ENST00000431533 KAT6BQ8WYB5 2073 aa21.4■■□□□ 1.02
RPL28-204ENST00000431533 IP6K1Q92551 441 aa21.39■■□□□ 1.01
RPL28-204ENST00000431533 SYT17Q9BSW7 474 aa21.39■■□□□ 1.01
RPL28-204ENST00000431533 FHDC1Q9C0D6 1143 aaPredicted RBP21.38■■□□□ 1.01
RPL28-204ENST00000431533 COG3Q96JB2 828 aa21.37■■□□□ 1.01
RPL28-204ENST00000431533 MYOM1P52179 1685 aa21.37■■□□□ 1.01
RPL28-204ENST00000431533 CDCA8Q53HL2 280 aa21.36■■□□□ 1.01
RPL28-204ENST00000431533 SLC27A3Q5K4L6 730 aa21.36■■□□□ 1.01
RPL28-204ENST00000431533 ARXQ96QS3 562 aa21.36■■□□□ 1.01
RPL28-204ENST00000431533 POLR3GLQ9BT43 218 aa21.36■■□□□ 1.01
RPL28-204ENST00000431533 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
RPL28-204ENST00000431533 DDX54Q8TDD1 881 aaKnown RBP21.35■■□□□ 1.01
RPL28-204ENST00000431533 SLC16A10Q8TF71 515 aa21.35■■□□□ 1.01
RPL28-204ENST00000431533 LTV1Q96GA3 475 aaPredicted RBP21.34■■□□□ 1.01
RPL28-204ENST00000431533 FAM208AQ9UK61 1670 aaKnown RBP21.34■■□□□ 1.01
RPL28-204ENST00000431533 AMPHP49418 695 aa21.33■■□□□ 1.01
RPL28-204ENST00000431533 SGIP1Q9BQI5 828 aa21.33■■□□□ 1.01
RPL28-204ENST00000431533 BTAF1O14981 1849 aa21.33■■□□□ 1.01
RPL28-204ENST00000431533 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
RPL28-204ENST00000431533 POLD1P28340 1107 aa21.32■■□□□ 1
RPL28-204ENST00000431533 EIF4G2P78344 907 aaKnown RBP eCLIP21.31■■□□□ 1
RPL28-204ENST00000431533 KIF20BQ96Q89 1820 aa21.3■■□□□ 1
RPL28-204ENST00000431533 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
RPL28-204ENST00000431533 SYTL4Q96C24 671 aaPredicted RBP21.3■■□□□ 1
RPL28-204ENST00000431533 MAP3K5Q99683 1374 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms