RNA–Protein interactions for RNA: ENST00000429907.5

RPE-205, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-205ENST00000429907 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
RPE-205ENST00000429907 ABTB2Q8N961 1025 aa11.07□□□□□ -0.64
RPE-205ENST00000429907 USP6P35125 1406 aa11.07□□□□□ -0.64
RPE-205ENST00000429907 MYOM1P52179 1685 aa11.06□□□□□ -0.64
RPE-205ENST00000429907 A0A0G2JS52 829 aa11.06□□□□□ -0.64
RPE-205ENST00000429907 PLEKHG3A1L390 1219 aa11.06□□□□□ -0.64
RPE-205ENST00000429907 MYT1Q01538 1121 aa11.06□□□□□ -0.64
RPE-205ENST00000429907 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
RPE-205ENST00000429907 LMO7Q8WWI1 1683 aa11.05□□□□□ -0.64
RPE-205ENST00000429907 ZBTB7CA1YPR0 619 aa11.05□□□□□ -0.64
RPE-205ENST00000429907 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
RPE-205ENST00000429907 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
RPE-205ENST00000429907 SEPT12Q8IYM1 358 aa11.05□□□□□ -0.64
RPE-205ENST00000429907 TMC1Q8TDI8 760 aa11.05□□□□□ -0.64
RPE-205ENST00000429907 USP54Q70EL1 1684 aa11.04□□□□□ -0.64
RPE-205ENST00000429907 SBNO2Q9Y2G9 1366 aa11.04□□□□□ -0.64
RPE-205ENST00000429907 COL18A1P39060 1754 aa11.04□□□□□ -0.64
RPE-205ENST00000429907 FAM83GA6ND36 823 aa11.04□□□□□ -0.64
RPE-205ENST00000429907 ZC3H6P61129 1189 aaKnown RBP11.04□□□□□ -0.64
RPE-205ENST00000429907 CHRNA2Q15822 529 aa11.04□□□□□ -0.64
RPE-205ENST00000429907 TSPYL2Q9H2G4 693 aaPredicted RBP11.04□□□□□ -0.64
RPE-205ENST00000429907 PRDM11Q9NQV5 511 aa11.04□□□□□ -0.64
RPE-205ENST00000429907 BTG4Q9NY30 223 aa11.04□□□□□ -0.64
RPE-205ENST00000429907 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
RPE-205ENST00000429907 KTN1Q86UP2 1357 aaKnown RBP11.03□□□□□ -0.64
RPE-205ENST00000429907 KIAA0232Q92628 1395 aa11.03□□□□□ -0.64
RPE-205ENST00000429907 USP47Q96K76 1375 aa11.03□□□□□ -0.64
RPE-205ENST00000429907 SRCAPQ6ZRS2 3230 aa11.03□□□□□ -0.64
RPE-205ENST00000429907 RGPD2P0DJD1 1756 aa11.03□□□□□ -0.64
RPE-205ENST00000429907 BLMP54132 1417 aaPredicted RBP11.03□□□□□ -0.64
RPE-205ENST00000429907 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
RPE-205ENST00000429907 CLSPNQ9HAW4 1339 aa11.03□□□□□ -0.64
RPE-205ENST00000429907 SOX12O15370 315 aa11.02□□□□□ -0.65
RPE-205ENST00000429907 DCAF8Q5TAQ9 597 aa11.02□□□□□ -0.65
RPE-205ENST00000429907 NLRP13Q86W25 1043 aa11.02□□□□□ -0.65
RPE-205ENST00000429907 STRN4Q9NRL3 753 aa11.02□□□□□ -0.65
RPE-205ENST00000429907 SLIT3O75094 1523 aa11.02□□□□□ -0.65
RPE-205ENST00000429907 NLRP6P59044 892 aa11.01□□□□□ -0.65
RPE-205ENST00000429907 RGPD1P0DJD0 1748 aa11.01□□□□□ -0.65
RPE-205ENST00000429907 MAP2P11137 1827 aaKnown RBP11□□□□□ -0.65
RPE-205ENST00000429907 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
RPE-205ENST00000429907 CD44P16070 742 aaKnown RBP11□□□□□ -0.65
RPE-205ENST00000429907 FAM98CQ17RN3 349 aaKnown RBP11□□□□□ -0.65
RPE-205ENST00000429907 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.657e-7■□□□□ 9.5
RPE-205ENST00000429907 FAM212AQ96EL1 285 aa11□□□□□ -0.65
RPE-205ENST00000429907 THSD7AQ9UPZ6 1657 aa11□□□□□ -0.65
RPE-205ENST00000429907 CAMTA1Q9Y6Y1 1673 aa11□□□□□ -0.65
RPE-205ENST00000429907 BRD4O60885 1362 aaPredicted RBP11□□□□□ -0.65
RPE-205ENST00000429907 SBF2Q86WG5 1849 aa11□□□□□ -0.65
RPE-205ENST00000429907 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
RPE-205ENST00000429907 VPS72Q15906 364 aa10.99□□□□□ -0.65
RPE-205ENST00000429907 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
RPE-205ENST00000429907 USP19O94966 1318 aa10.99□□□□□ -0.65
RPE-205ENST00000429907 CPSF1Q10570 1443 aaKnown RBP10.99□□□□□ -0.65
RPE-205ENST00000429907 PARP4Q9UKK3 1724 aaKnown RBP10.98□□□□□ -0.65
RPE-205ENST00000429907 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 EVA1CP58658 441 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 EVX2Q03828 476 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 SF3B2Q13435 895 aaKnown RBP10.98□□□□□ -0.65
RPE-205ENST00000429907 KRT27Q7Z3Y8 459 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 TESK2Q96S53 571 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 USP35Q9P2H5 1018 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 TIMELESSQ9UNS1 1208 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 TTC21BQ7Z4L5 1316 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 A0A1W2PP64 1363 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 SSH2Q76I76 1423 aa10.98□□□□□ -0.65
RPE-205ENST00000429907 TNS1Q9HBL0 1735 aaKnown RBP10.98□□□□□ -0.65
RPE-205ENST00000429907 GCP02774 474 aa10.97□□□□□ -0.65
RPE-205ENST00000429907 CCDC125Q86Z20 511 aa10.97□□□□□ -0.65
RPE-205ENST00000429907 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
RPE-205ENST00000429907 NFAT5O94916 1531 aa10.97□□□□□ -0.65
RPE-205ENST00000429907 FAM208AQ9UK61 1670 aaKnown RBP10.96□□□□□ -0.65
RPE-205ENST00000429907 LRRC37A3O60309 1634 aa10.96□□□□□ -0.65
RPE-205ENST00000429907 EDC4Q6P2E9 1401 aaKnown RBP10.96□□□□□ -0.65
RPE-205ENST00000429907 TMF1P82094 1093 aa10.96□□□□□ -0.65
RPE-205ENST00000429907 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.65
RPE-205ENST00000429907 GSE1Q14687 1217 aa10.96□□□□□ -0.65
RPE-205ENST00000429907 TERF2IPQ9NYB0 399 aa10.96□□□□□ -0.65
RPE-205ENST00000429907 LRP5O75197 1615 aa10.95□□□□□ -0.66
RPE-205ENST00000429907 COL5A2P05997 1499 aaPredicted RBP10.95□□□□□ -0.66
RPE-205ENST00000429907 CPDO75976 1380 aa10.95□□□□□ -0.66
RPE-205ENST00000429907 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
RPE-205ENST00000429907 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
RPE-205ENST00000429907 HAX1O00165 279 aa10.95□□□□□ -0.66
RPE-205ENST00000429907 NME9Q86XW9 330 aa10.95□□□□□ -0.66
RPE-205ENST00000429907 POLR3GLQ9BT43 218 aa10.95□□□□□ -0.66
RPE-205ENST00000429907 R3HDM1Q15032 1099 aaKnown RBP10.94□□□□□ -0.66
RPE-205ENST00000429907 NINLQ9Y2I6 1382 aa10.93□□□□□ -0.66
RPE-205ENST00000429907 SPATA31A1Q5TZJ5 1347 aa10.93□□□□□ -0.66
RPE-205ENST00000429907 SLC24A1O60721 1099 aa10.93□□□□□ -0.66
RPE-205ENST00000429907 LARP1Q6PKG0 1096 aaKnown RBP10.93□□□□□ -0.66
RPE-205ENST00000429907 KCNH5Q8NCM2 988 aa10.93□□□□□ -0.66
RPE-205ENST00000429907 ECM2O94769 699 aaPredicted RBP10.92□□□□□ -0.66
RPE-205ENST00000429907 PYGBP11216 843 aa10.92□□□□□ -0.66
RPE-205ENST00000429907 BAG6P46379 1132 aa10.92□□□□□ -0.66
RPE-205ENST00000429907 ANKRD36BQ8N2N9 1353 aa10.91□□□□□ -0.66
RPE-205ENST00000429907 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
RPE-205ENST00000429907 EZH2Q15910 746 aaKnown RBP10.91□□□□□ -0.66
RPE-205ENST00000429907 CDCA8Q53HL2 280 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms