RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NFAT5O94916 1531 aa28.99■■■□□ 2.23
VSX1-205ENST00000429762 AEBP1Q8IUX7 1158 aa28.99■■■□□ 2.23
VSX1-205ENST00000429762 PHACTR3Q96KR7 559 aa28.99■■■□□ 2.23
VSX1-205ENST00000429762 PHF23Q9BUL5 403 aaPredicted RBP28.99■■■□□ 2.23
VSX1-205ENST00000429762 ZBTB7CA1YPR0 619 aa28.99■■■□□ 2.23
VSX1-205ENST00000429762 PNNQ9H307 717 aaKnown RBP28.98■■■□□ 2.23
VSX1-205ENST00000429762 RGPD1P0DJD0 1748 aa28.96■■■□□ 2.23
VSX1-205ENST00000429762 HOXC9P31274 260 aa28.96■■■□□ 2.23
VSX1-205ENST00000429762 SULT6B1Q6IMI4 303 aa28.95■■■□□ 2.23
VSX1-205ENST00000429762 TRMT2AQ8IZ69 625 aaKnown RBP28.95■■■□□ 2.23
VSX1-205ENST00000429762 ALS2Q96Q42 1657 aa28.95■■■□□ 2.23
VSX1-205ENST00000429762 E9PSI1 815 aa28.95■■■□□ 2.22
VSX1-205ENST00000429762 RIPK4P57078 832 aa28.95■■■□□ 2.22
VSX1-205ENST00000429762 CCDC27Q2M243 656 aa28.95■■■□□ 2.22
VSX1-205ENST00000429762 TRIM35Q9UPQ4 493 aa28.95■■■□□ 2.22
VSX1-205ENST00000429762 BRINP3Q76B58 766 aa28.94■■■□□ 2.22
VSX1-205ENST00000429762 RNF123Q5XPI4 1314 aa28.93■■■□□ 2.22
VSX1-205ENST00000429762 LTV1Q96GA3 475 aaPredicted RBP28.93■■■□□ 2.22
VSX1-205ENST00000429762 SLIT3O75094 1523 aa28.92■■■□□ 2.22
VSX1-205ENST00000429762 NEFMP07197 916 aa28.92■■■□□ 2.22
VSX1-205ENST00000429762 NPHP3Q7Z494 1330 aa28.91■■■□□ 2.22
VSX1-205ENST00000429762 SLAIN2Q9P270 581 aa28.91■■■□□ 2.22
VSX1-205ENST00000429762 WDR63Q8IWG1 891 aa28.9■■■□□ 2.22
VSX1-205ENST00000429762 PXDNQ92626 1479 aa28.9■■■□□ 2.22
VSX1-205ENST00000429762 GCP02774 474 aa28.9■■■□□ 2.22
VSX1-205ENST00000429762 KCNH5Q8NCM2 988 aa28.9■■■□□ 2.22
VSX1-205ENST00000429762 USP19O94966 1318 aa28.89■■■□□ 2.21
VSX1-205ENST00000429762 NFE2L2Q16236 605 aa28.88■■■□□ 2.21
VSX1-205ENST00000429762 MED1Q15648 1581 aaPredicted RBP28.88■■■□□ 2.21
VSX1-205ENST00000429762 EYA1Q99502 592 aa28.88■■■□□ 2.21
VSX1-205ENST00000429762 ARHGEF10O15013 1369 aa28.87■■■□□ 2.21
VSX1-205ENST00000429762 RRP1P56182 461 aaKnown RBP28.87■■■□□ 2.21
VSX1-205ENST00000429762 NCBP3Q53F19 620 aaKnown RBP28.87■■■□□ 2.21
VSX1-205ENST00000429762 KIF24Q5T7B8 1368 aa28.87■■■□□ 2.21
VSX1-205ENST00000429762 RTL1A6NKG5 1358 aa28.86■■■□□ 2.21
VSX1-205ENST00000429762 DLG5Q8TDM6 1919 aa28.86■■■□□ 2.21
VSX1-205ENST00000429762 TNS3Q68CZ2 1445 aa28.85■■■□□ 2.21
VSX1-205ENST00000429762 IP6K1Q92551 441 aa28.84■■■□□ 2.21
VSX1-205ENST00000429762 THUMPD2Q9BTF0 503 aaKnown RBP28.83■■■□□ 2.21
VSX1-205ENST00000429762 IGSF1Q8N6C5 1336 aa28.83■■■□□ 2.21
VSX1-205ENST00000429762 PLIN1O60240 522 aa28.82■■■□□ 2.2
VSX1-205ENST00000429762 CABLES1Q8TDN4 633 aa28.82■■■□□ 2.2
VSX1-205ENST00000429762 ARHGEF25Q86VW2 580 aa28.82■■■□□ 2.2
VSX1-205ENST00000429762 TSR2Q969E8 191 aaKnown RBP28.81■■■□□ 2.2
VSX1-205ENST00000429762 ZC3H6P61129 1189 aaKnown RBP28.81■■■□□ 2.2
VSX1-205ENST00000429762 USHBP1Q8N6Y0 703 aa28.81■■■□□ 2.2
VSX1-205ENST00000429762 PHRF1Q9P1Y6 1649 aaKnown RBP28.8■■■□□ 2.2
VSX1-205ENST00000429762 SPATA31A3Q5VYP0 1347 aa28.8■■■□□ 2.2
VSX1-205ENST00000429762 RGPD2P0DJD1 1756 aa28.78■■■□□ 2.2
VSX1-205ENST00000429762 FAM83GA6ND36 823 aa28.77■■■□□ 2.2
VSX1-205ENST00000429762 MYH16Q9H6N6 1097 aa28.77■■■□□ 2.2
VSX1-205ENST00000429762 KDRP35968 1356 aa28.76■■■□□ 2.2
VSX1-205ENST00000429762 FANCIQ9NVI1 1328 aa28.76■■■□□ 2.19
VSX1-205ENST00000429762 LTBP4Q8N2S1 1624 aa28.76■■■□□ 2.19
VSX1-205ENST00000429762 RGPD5Q99666 1765 aa28.76■■■□□ 2.19
VSX1-205ENST00000429762 DCTN1Q14203 1278 aa28.75■■■□□ 2.19
VSX1-205ENST00000429762 CRYBG1Q9Y4K1 1723 aa28.75■■■□□ 2.19
VSX1-205ENST00000429762 LRRC59Q96AG4 307 aaKnown RBP28.75■■■□□ 2.19
VSX1-205ENST00000429762 AXIN2Q9Y2T1 843 aa28.74■■■□□ 2.19
VSX1-205ENST00000429762 LAS1LQ9Y4W2 734 aaKnown RBP28.74■■■□□ 2.19
VSX1-205ENST00000429762 SOS2Q07890 1332 aaPredicted RBP28.73■■■□□ 2.19
VSX1-205ENST00000429762 BCAR3O75815 825 aa28.72■■■□□ 2.19
VSX1-205ENST00000429762 NBPF6Q5VWK0 638 aa28.72■■■□□ 2.19
VSX1-205ENST00000429762 NBPF4Q96M43 638 aa28.72■■■□□ 2.19
VSX1-205ENST00000429762 IL16Q14005 1332 aa28.72■■■□□ 2.19
VSX1-205ENST00000429762 MTHFSDQ2M296 383 aaKnown RBP28.71■■■□□ 2.19
VSX1-205ENST00000429762 NHSL1Q5SYE7 1610 aa28.7■■■□□ 2.19
VSX1-205ENST00000429762 ANKRD24Q8TF21 1146 aa28.7■■■□□ 2.19
VSX1-205ENST00000429762 EXOSC9Q06265 439 aaKnown RBP28.69■■■□□ 2.18
VSX1-205ENST00000429762 LMOD3Q0VAK6 560 aa28.68■■■□□ 2.18
VSX1-205ENST00000429762 ERICH6BQ5W0A0 696 aa28.68■■■□□ 2.18
VSX1-205ENST00000429762 CHRNA2Q15822 529 aa28.68■■■□□ 2.18
VSX1-205ENST00000429762 C20orf194Q5TEA3 1177 aa28.68■■■□□ 2.18
VSX1-205ENST00000429762 MCM10Q7L590 875 aa28.67■■■□□ 2.18
VSX1-205ENST00000429762 PPP4R2Q9NY27 417 aa28.66■■■□□ 2.18
VSX1-205ENST00000429762 EXOC6Q8TAG9 804 aa28.66■■■□□ 2.18
VSX1-205ENST00000429762 COL18A1P39060 1754 aa28.64■■■□□ 2.18
VSX1-205ENST00000429762 ROBO1Q9Y6N7 1651 aa28.64■■■□□ 2.18
VSX1-205ENST00000429762 KIAA0232Q92628 1395 aa28.64■■■□□ 2.18
VSX1-205ENST00000429762 BCL2L13Q9BXK5 485 aa28.64■■■□□ 2.17
VSX1-205ENST00000429762 RARSP54136 660 aaKnown RBP28.62■■■□□ 2.17
VSX1-205ENST00000429762 B4GALNT3Q6L9W6 998 aa28.62■■■□□ 2.17
VSX1-205ENST00000429762 CALD1Q05682 793 aaKnown RBP28.61■■■□□ 2.17
VSX1-205ENST00000429762 CRBNQ96SW2 442 aa28.61■■■□□ 2.17
VSX1-205ENST00000429762 IFT57Q9NWB7 429 aa28.61■■■□□ 2.17
VSX1-205ENST00000429762 ABCA3Q99758 1704 aa28.6■■■□□ 2.17
VSX1-205ENST00000429762 GAS2L2Q8NHY3 880 aa28.6■■■□□ 2.17
VSX1-205ENST00000429762 MBIPQ9NS73 344 aa28.6■■■□□ 2.17
VSX1-205ENST00000429762 ERBB3P21860 1342 aa28.59■■■□□ 2.17
VSX1-205ENST00000429762 ZNF853P0CG23 659 aa28.59■■■□□ 2.17
VSX1-205ENST00000429762 GNAI1P63096 354 aa28.59■■■□□ 2.17
VSX1-205ENST00000429762 CAMTA1Q9Y6Y1 1673 aa28.58■■■□□ 2.16
VSX1-205ENST00000429762 HAP1P54257 671 aaPredicted RBP28.57■■■□□ 2.16
VSX1-205ENST00000429762 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.57■■■□□ 2.16
VSX1-205ENST00000429762 CFAP44Q96MT7 982 aa28.56■■■□□ 2.16
VSX1-205ENST00000429762 RTF1Q92541 710 aaKnown RBP28.55■■■□□ 2.16
VSX1-205ENST00000429762 FRAT1Q92837 279 aaPredicted RBP28.55■■■□□ 2.16
VSX1-205ENST00000429762 CPDO75976 1380 aa28.55■■■□□ 2.16
VSX1-205ENST00000429762 NCAPD2Q15021 1401 aa28.55■■■□□ 2.16
VSX1-205ENST00000429762 CRB1P82279 1406 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms