RNA–Protein interactions for RNA: ENST00000429574.1

LIN28AP1-201, Transcript of LIN28A pseudogene 1, humanhuman

BASIC

Gene LIN28AP1, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AP1-201ENST00000429574 PCGF6Q9BYE7 350 aa26.48■■□□□ 1.83
LIN28AP1-201ENST00000429574 DDB1Q16531 1140 aa26.47■■□□□ 1.83
LIN28AP1-201ENST00000429574 AXIN2Q9Y2T1 843 aa26.47■■□□□ 1.83
LIN28AP1-201ENST00000429574 NME9Q86XW9 330 aa26.46■■□□□ 1.83
LIN28AP1-201ENST00000429574 CDCA7Q9BWT1 371 aaPredicted RBP26.45■■□□□ 1.82
LIN28AP1-201ENST00000429574 COL18A1P39060 1754 aa26.44■■□□□ 1.82
LIN28AP1-201ENST00000429574 EDC4Q6P2E9 1401 aaKnown RBP26.44■■□□□ 1.82
LIN28AP1-201ENST00000429574 RGPD5Q99666 1765 aa26.43■■□□□ 1.82
LIN28AP1-201ENST00000429574 PARP4Q9UKK3 1724 aaKnown RBP26.43■■□□□ 1.82
LIN28AP1-201ENST00000429574 NINLQ9Y2I6 1382 aa26.43■■□□□ 1.82
LIN28AP1-201ENST00000429574 PSDA5PKW4 1024 aaPredicted RBP26.42■■□□□ 1.82
LIN28AP1-201ENST00000429574 TMF1P82094 1093 aa26.42■■□□□ 1.82
LIN28AP1-201ENST00000429574 EZH2Q15910 746 aaKnown RBP26.42■■□□□ 1.82
LIN28AP1-201ENST00000429574 USP31Q70CQ4 1352 aa26.42■■□□□ 1.82
LIN28AP1-201ENST00000429574 TNS1Q9HBL0 1735 aaKnown RBP26.42■■□□□ 1.82
LIN28AP1-201ENST00000429574 TESK2Q96S53 571 aa26.41■■□□□ 1.82
LIN28AP1-201ENST00000429574 CARD10Q9BWT7 1032 aa26.41■■□□□ 1.82
LIN28AP1-201ENST00000429574 A0A1W2PP64 1363 aa26.41■■□□□ 1.82
LIN28AP1-201ENST00000429574 CD163L1Q9NR16 1453 aa26.41■■□□□ 1.82
LIN28AP1-201ENST00000429574 DISP2A7MBM2 1401 aa26.4■■□□□ 1.82
LIN28AP1-201ENST00000429574 NFAT5O94916 1531 aa26.39■■□□□ 1.81
LIN28AP1-201ENST00000429574 PARD3Q8TEW0 1356 aa26.38■■□□□ 1.81
LIN28AP1-201ENST00000429574 USP47Q96K76 1375 aa26.38■■□□□ 1.81
LIN28AP1-201ENST00000429574 CDCA8Q53HL2 280 aa26.38■■□□□ 1.81
LIN28AP1-201ENST00000429574 TIMELESSQ9UNS1 1208 aa26.38■■□□□ 1.81
LIN28AP1-201ENST00000429574 OVOS2A0A0G2JMS6 1433 aa26.38■■□□□ 1.81
LIN28AP1-201ENST00000429574 OVOS2A0A0J9YW53 1432 aa26.38■■□□□ 1.81
LIN28AP1-201ENST00000429574 OVOS2Q6IE36 1432 aa26.38■■□□□ 1.81
LIN28AP1-201ENST00000429574 EXOC5O00471 708 aa26.37■■□□□ 1.81
LIN28AP1-201ENST00000429574 CCDC7Q96M83 1385 aa26.36■■□□□ 1.81
LIN28AP1-201ENST00000429574 COG3Q96JB2 828 aa26.36■■□□□ 1.81
LIN28AP1-201ENST00000429574 CAMKK2Q96RR4 588 aa26.36■■□□□ 1.81
LIN28AP1-201ENST00000429574 NLRP2Q9NX02 1062 aa26.36■■□□□ 1.81
LIN28AP1-201ENST00000429574 ABCC6O95255 1503 aa26.35■■□□□ 1.81
LIN28AP1-201ENST00000429574 R3HDM1Q15032 1099 aaKnown RBP26.35■■□□□ 1.81
LIN28AP1-201ENST00000429574 NBPF14Q5TI25 921 aa26.35■■□□□ 1.81
LIN28AP1-201ENST00000429574 LTN1O94822 1766 aa26.35■■□□□ 1.81
LIN28AP1-201ENST00000429574 CLSPNQ9HAW4 1339 aa26.35■■□□□ 1.81
LIN28AP1-201ENST00000429574 USP54Q70EL1 1684 aa26.33■■□□□ 1.81
LIN28AP1-201ENST00000429574 LRRC37A3O60309 1634 aa26.32■■□□□ 1.8
LIN28AP1-201ENST00000429574 WNK3Q9BYP7 1800 aa26.32■■□□□ 1.8
LIN28AP1-201ENST00000429574 ANKRD24Q8TF21 1146 aa26.31■■□□□ 1.8
LIN28AP1-201ENST00000429574 ERBB3P21860 1342 aa26.29■■□□□ 1.8
LIN28AP1-201ENST00000429574 ANKRD36BQ8N2N9 1353 aa26.29■■□□□ 1.8
LIN28AP1-201ENST00000429574 SRCAPQ6ZRS2 3230 aa26.29■■□□□ 1.8
LIN28AP1-201ENST00000429574 MARCH10Q8NA82 808 aaPredicted RBP26.28■■□□□ 1.8
LIN28AP1-201ENST00000429574 AMPHP49418 695 aa26.27■■□□□ 1.8
LIN28AP1-201ENST00000429574 LTV1Q96GA3 475 aaPredicted RBP26.27■■□□□ 1.8
LIN28AP1-201ENST00000429574 BCL11BQ9C0K0 894 aaPredicted RBP26.27■■□□□ 1.8
LIN28AP1-201ENST00000429574 IL2RBP14784 551 aa26.26■■□□□ 1.79
LIN28AP1-201ENST00000429574 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
LIN28AP1-201ENST00000429574 IP6K1Q92551 441 aa26.25■■□□□ 1.79
LIN28AP1-201ENST00000429574 SBF2Q86WG5 1849 aa26.25■■□□□ 1.79
LIN28AP1-201ENST00000429574 PEAK1Q9H792 1746 aa26.23■■□□□ 1.79
LIN28AP1-201ENST00000429574 LRP5O75197 1615 aa26.23■■□□□ 1.79
LIN28AP1-201ENST00000429574 PLSCR1O15162 318 aa26.22■■□□□ 1.79
LIN28AP1-201ENST00000429574 RREB1Q92766 1687 aa26.21■■□□□ 1.79
LIN28AP1-201ENST00000429574 GGNBP2Q9H3C7 697 aa26.2■■□□□ 1.78
LIN28AP1-201ENST00000429574 TNS2Q63HR2 1409 aa26.2■■□□□ 1.78
LIN28AP1-201ENST00000429574 POLR3GLQ9BT43 218 aa26.19■■□□□ 1.78
LIN28AP1-201ENST00000429574 MAP3K19Q56UN5 1328 aa26.18■■□□□ 1.78
LIN28AP1-201ENST00000429574 BCL9O00512 1426 aa26.18■■□□□ 1.78
LIN28AP1-201ENST00000429574 NUP188Q5SRE5 1749 aa26.18■■□□□ 1.78
LIN28AP1-201ENST00000429574 KAT6BQ8WYB5 2073 aa26.18■■□□□ 1.78
LIN28AP1-201ENST00000429574 FYB1O15117 783 aa26.17■■□□□ 1.78
LIN28AP1-201ENST00000429574 HOXC9P31274 260 aa26.17■■□□□ 1.78
LIN28AP1-201ENST00000429574 FAM208AQ9UK61 1670 aaKnown RBP26.15■■□□□ 1.78
LIN28AP1-201ENST00000429574 FBLN1P23142 703 aa26.15■■□□□ 1.78
LIN28AP1-201ENST00000429574 ACSBG1Q96GR2 724 aa26.14■■□□□ 1.78
LIN28AP1-201ENST00000429574 RGPD3A6NKT7 1758 aaPredicted RBP26.14■■□□□ 1.78
LIN28AP1-201ENST00000429574 RGPD4Q7Z3J3 1758 aa26.14■■□□□ 1.78
LIN28AP1-201ENST00000429574 RRS1Q15050 365 aaKnown RBP26.13■■□□□ 1.77
LIN28AP1-201ENST00000429574 PTF1AQ7RTS3 328 aa26.13■■□□□ 1.77
LIN28AP1-201ENST00000429574 DDX54Q8TDD1 881 aaKnown RBP26.13■■□□□ 1.77
LIN28AP1-201ENST00000429574 SMG6Q86US8 1419 aaKnown RBP26.12■■□□□ 1.77
LIN28AP1-201ENST00000429574 KIF20BQ96Q89 1820 aa26.11■■□□□ 1.77
LIN28AP1-201ENST00000429574 RTL1A6NKG5 1358 aa26.1■■□□□ 1.77
LIN28AP1-201ENST00000429574 EIF4G2P78344 907 aaKnown RBP eCLIP26.1■■□□□ 1.77
LIN28AP1-201ENST00000429574 KCNQ2O43526 872 aa26.09■■□□□ 1.77
LIN28AP1-201ENST00000429574 PPP1R1BQ9UD71 204 aaPredicted RBP26.09■■□□□ 1.77
LIN28AP1-201ENST00000429574 TXNRD1Q16881 649 aa26.08■■□□□ 1.77
LIN28AP1-201ENST00000429574 STK32BQ9NY57 414 aa26.08■■□□□ 1.77
LIN28AP1-201ENST00000429574 NSD3Q9BZ95 1437 aa26.07■■□□□ 1.76
LIN28AP1-201ENST00000429574 SPON1Q9HCB6 807 aa26.07■■□□□ 1.76
LIN28AP1-201ENST00000429574 RAPGEF4Q8WZA2 1011 aa26.05■■□□□ 1.76
LIN28AP1-201ENST00000429574 NHSQ6T4R5 1651 aa26.05■■□□□ 1.76
LIN28AP1-201ENST00000429574 ZCRB1Q8TBF4 217 aaKnown RBP26.04■■□□□ 1.76
LIN28AP1-201ENST00000429574 SYTL4Q96C24 671 aaPredicted RBP26.04■■□□□ 1.76
LIN28AP1-201ENST00000429574 CARD14Q9BXL6 1004 aa26.04■■□□□ 1.76
LIN28AP1-201ENST00000429574 CGNL1Q0VF96 1302 aa26.04■■□□□ 1.76
LIN28AP1-201ENST00000429574 PPM1GO15355 546 aaPredicted RBP26.03■■□□□ 1.76
LIN28AP1-201ENST00000429574 PROM2Q8N271 834 aa26.03■■□□□ 1.76
LIN28AP1-201ENST00000429574 RGPD2P0DJD1 1756 aa26.02■■□□□ 1.76
LIN28AP1-201ENST00000429574 FLT4P35916 1363 aa26.02■■□□□ 1.76
LIN28AP1-201ENST00000429574 MYOM1P52179 1685 aa26.02■■□□□ 1.76
LIN28AP1-201ENST00000429574 HSP90AB2PQ58FF8 381 aa26.01■■□□□ 1.75
LIN28AP1-201ENST00000429574 NBPF6Q5VWK0 638 aa26.01■■□□□ 1.75
LIN28AP1-201ENST00000429574 NBPF4Q96M43 638 aa26.01■■□□□ 1.75
LIN28AP1-201ENST00000429574 KIF24Q5T7B8 1368 aa26■■□□□ 1.75
LIN28AP1-201ENST00000429574 HSPA5P11021 654 aaKnown RBP26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms