RNA–Protein interactions for RNA: ENST00000429280.1

SKP1P3-201, Transcript of S-phase kinase associated protein 1 pseudogene 3, humanhuman

BASIC

Gene SKP1P3, Length 487 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P3-201ENST00000429280 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
SKP1P3-201ENST00000429280 USP17L1Q7RTZ2 530 aa7.65□□□□□ -1.18
SKP1P3-201ENST00000429280 MAP7D1Q3KQU3 841 aa7.64□□□□□ -1.19
SKP1P3-201ENST00000429280 PLA2G2CQ5R387 149 aa7.64□□□□□ -1.19
SKP1P3-201ENST00000429280 PPP1R18Q6NYC8 613 aa7.64□□□□□ -1.19
SKP1P3-201ENST00000429280 PLPP7Q8NBV4 271 aa7.64□□□□□ -1.19
SKP1P3-201ENST00000429280 C1QTNF2Q9BXJ5 285 aa7.64□□□□□ -1.19
SKP1P3-201ENST00000429280 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.64□□□□□ -1.19
SKP1P3-201ENST00000429280 USTQ9Y2C2 406 aa7.64□□□□□ -1.19
SKP1P3-201ENST00000429280 WNT7BP56706 349 aa7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 TRIM32Q13049 653 aa7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 RNF20Q5VTR2 975 aa7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 TRMT44Q8IYL2 757 aaKnown RBP7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 DEPDC4Q8N2C3 294 aa7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 KCTD17Q8N5Z5 321 aa7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 SLC10A4Q96EP9 437 aa7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 CDV3Q9UKY7 258 aaKnown RBP7.63□□□□□ -1.19
SKP1P3-201ENST00000429280 ZBTB7CA1YPR0 619 aa7.62□□□□□ -1.19
SKP1P3-201ENST00000429280 GIGYF1O75420 1035 aaPredicted RBP7.62□□□□□ -1.19
SKP1P3-201ENST00000429280 RPIAP49247 311 aa7.62□□□□□ -1.19
SKP1P3-201ENST00000429280 NCOA4Q13772 614 aa7.62□□□□□ -1.19
SKP1P3-201ENST00000429280 ELOAQ14241 798 aaKnown RBP7.62□□□□□ -1.19
SKP1P3-201ENST00000429280 TRAF7Q6Q0C0 670 aa7.62□□□□□ -1.19
SKP1P3-201ENST00000429280 MKRN1Q9UHC7 482 aaKnown RBP7.62□□□□□ -1.19
SKP1P3-201ENST00000429280 ATP5J2-PTCD1G3V325 749 aa7.61□□□□□ -1.19
SKP1P3-201ENST00000429280 VARSP26640 1264 aaKnown RBP7.61□□□□□ -1.19
SKP1P3-201ENST00000429280 SKOR1P84550 965 aa7.61□□□□□ -1.19
SKP1P3-201ENST00000429280 EML3Q32P44 896 aa7.61□□□□□ -1.19
SKP1P3-201ENST00000429280 NBPF20Q3BBV1 942 aa7.61□□□□□ -1.19
SKP1P3-201ENST00000429280 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
SKP1P3-201ENST00000429280 FAM196BA6NMK8 535 aa7.6□□□□□ -1.19
SKP1P3-201ENST00000429280 ESPNB1AK53 854 aa7.6□□□□□ -1.19
SKP1P3-201ENST00000429280 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
SKP1P3-201ENST00000429280 CCDC125Q86Z20 511 aa7.6□□□□□ -1.19
SKP1P3-201ENST00000429280 SEPT12Q8IYM1 358 aa7.6□□□□□ -1.19
SKP1P3-201ENST00000429280 CCDC85AQ96PX6 553 aaPredicted RBP7.6□□□□□ -1.19
SKP1P3-201ENST00000429280 PODXL2Q9NZ53 605 aa7.6□□□□□ -1.19
SKP1P3-201ENST00000429280 LARP1Q6PKG0 1096 aaKnown RBP7.59□□□□□ -1.19
SKP1P3-201ENST00000429280 AEBP1Q8IUX7 1158 aa7.59□□□□□ -1.19
SKP1P3-201ENST00000429280 DOLKQ9UPQ8 538 aa7.59□□□□□ -1.19
SKP1P3-201ENST00000429280 TMEM88BA6NKF7 163 aa7.58□□□□□ -1.2
SKP1P3-201ENST00000429280 RASA1P20936 1047 aa7.58□□□□□ -1.2
SKP1P3-201ENST00000429280 MMRN1Q13201 1228 aa7.58□□□□□ -1.2
SKP1P3-201ENST00000429280 IFFO2Q5TF58 517 aa7.58□□□□□ -1.2
SKP1P3-201ENST00000429280 NOD1Q9Y239 953 aa7.58□□□□□ -1.2
SKP1P3-201ENST00000429280 SHROOM4Q9ULL8 1493 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L10C9JJH3 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L12C9JPN9 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L21D6R901 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 PTK7Q13308 1070 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 CRTC2Q53ET0 693 aaPredicted RBP7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 TRIM50Q86XT4 487 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 KCTD15Q96SI1 283 aaPredicted RBP7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 NOVA2Q9UNW9 492 aaKnown RBP7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 MAP4K5Q9Y4K4 846 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 MYO15BQ96JP2 1530 aa7.57□□□□□ -1.2
SKP1P3-201ENST00000429280 CARNS1A5YM72 827 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 BRD1O95696 1058 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 OXLD1Q5BKU9 147 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 LIAT1Q6ZQX7 453 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 OGFOD1Q8N543 542 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 EHBP1Q8NDI1 1231 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 SIRT1Q96EB6 747 aa7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 CDCA7Q9BWT1 371 aaPredicted RBP7.56□□□□□ -1.2
SKP1P3-201ENST00000429280 USP4Q13107 963 aa7.55□□□□□ -1.2
SKP1P3-201ENST00000429280 TMEM164Q5U3C3 297 aa7.55□□□□□ -1.2
SKP1P3-201ENST00000429280 CDK15Q96Q40 435 aa7.55□□□□□ -1.2
SKP1P3-201ENST00000429280 PCDHB11Q9Y5F2 797 aa7.55□□□□□ -1.2
SKP1P3-201ENST00000429280 ZBTB7BO15156 539 aaPredicted RBP7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 CLDN10P78369 228 aa7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 ANKMY2Q8IV38 441 aa7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 LARGE2Q8N3Y3 721 aa7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 MPNDQ8N594 471 aa7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 FAM200AQ8TCP9 573 aa7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 STK32AQ8WU08 396 aa7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 EMID1Q96A84 441 aaPredicted RBP7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 DNAAF2Q9NVR5 837 aaKnown RBP7.54□□□□□ -1.2
SKP1P3-201ENST00000429280 PATL2C9JE40 543 aaKnown RBP7.53□□□□□ -1.2
SKP1P3-201ENST00000429280 SLC19A1P41440 591 aa7.53□□□□□ -1.2
SKP1P3-201ENST00000429280 GTF2IP78347 998 aa7.53□□□□□ -1.2
SKP1P3-201ENST00000429280 ARID5BQ14865 1188 aa7.53□□□□□ -1.2
SKP1P3-201ENST00000429280 INTS6LQ5JSJ4 861 aaKnown RBP7.53□□□□□ -1.2
SKP1P3-201ENST00000429280 ERVH48-1M5A8F1 160 aa7.52□□□□□ -1.21
SKP1P3-201ENST00000429280 SIAH2O43255 324 aa7.52□□□□□ -1.21
SKP1P3-201ENST00000429280 RAB15P59190 212 aa7.52□□□□□ -1.21
SKP1P3-201ENST00000429280 KCNA1Q09470 495 aa7.52□□□□□ -1.21
SKP1P3-201ENST00000429280 DPYDQ12882 1025 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms