RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 PDXDC2PQ6P474 469 aa9.73□□□□□ -0.85
LINC00348-201ENST00000428761 VEGFBP49765 207 aa9.72□□□□□ -0.85
LINC00348-201ENST00000428761 MPNDQ8N594 471 aa9.72□□□□□ -0.85
LINC00348-201ENST00000428761 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
LINC00348-201ENST00000428761 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.86
LINC00348-201ENST00000428761 RANGAP1P46060 587 aaPredicted RBP9.71□□□□□ -0.86
LINC00348-201ENST00000428761 FAM174AQ8TBP5 190 aa9.71□□□□□ -0.86
LINC00348-201ENST00000428761 OCSTAMPQ9BR26 566 aa9.71□□□□□ -0.86
LINC00348-201ENST00000428761 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.86
LINC00348-201ENST00000428761 TLL2Q9Y6L7 1015 aa9.71□□□□□ -0.86
LINC00348-201ENST00000428761 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
LINC00348-201ENST00000428761 GMPRP36959 345 aa9.7□□□□□ -0.86
LINC00348-201ENST00000428761 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
LINC00348-201ENST00000428761 SOCS7O14512 581 aa9.69□□□□□ -0.86
LINC00348-201ENST00000428761 ZFP42Q96MM3 310 aa9.69□□□□□ -0.86
LINC00348-201ENST00000428761 CDK15Q96Q40 435 aa9.69□□□□□ -0.86
LINC00348-201ENST00000428761 MAGEB6P1A0A0J9YX57 407 aa9.68□□□□□ -0.86
LINC00348-201ENST00000428761 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
LINC00348-201ENST00000428761 IRF7Q92985 503 aa9.68□□□□□ -0.86
LINC00348-201ENST00000428761 ARHGAP9Q9BRR9 750 aa9.68□□□□□ -0.86
LINC00348-201ENST00000428761 PTK2Q05397 1052 aa9.67□□□□□ -0.86
LINC00348-201ENST00000428761 ERFEQ4G0M1 354 aa9.67□□□□□ -0.86
LINC00348-201ENST00000428761 PNMA1Q8ND90 353 aa9.67□□□□□ -0.86
LINC00348-201ENST00000428761 CARD14Q9BXL6 1004 aa9.67□□□□□ -0.86
LINC00348-201ENST00000428761 GPSM3Q9Y4H4 160 aa9.67□□□□□ -0.86
LINC00348-201ENST00000428761 FAM181BA6NEQ2 426 aa9.66□□□□□ -0.86
LINC00348-201ENST00000428761 GRM5P41594 1212 aa9.66□□□□□ -0.86
LINC00348-201ENST00000428761 NNTQ13423 1086 aa9.66□□□□□ -0.86
LINC00348-201ENST00000428761 NPAS3Q8IXF0 933 aa9.66□□□□□ -0.86
LINC00348-201ENST00000428761 TRMT44Q8IYL2 757 aaKnown RBP9.66□□□□□ -0.86
LINC00348-201ENST00000428761 GPR37L1O60883 481 aa9.65□□□□□ -0.86
LINC00348-201ENST00000428761 ARID5BQ14865 1188 aa9.65□□□□□ -0.86
LINC00348-201ENST00000428761 ZBTB7CA1YPR0 619 aa9.64□□□□□ -0.87
LINC00348-201ENST00000428761 ADH1CP00326 375 aa9.64□□□□□ -0.87
LINC00348-201ENST00000428761 ZBTB33Q86T24 672 aa9.64□□□□□ -0.87
LINC00348-201ENST00000428761 ZSCAN1Q8NBB4 408 aa9.64□□□□□ -0.87
LINC00348-201ENST00000428761 ZNF777Q9ULD5 760 aaPredicted RBP9.64□□□□□ -0.87
LINC00348-201ENST00000428761 H3BM21 787 aa9.63□□□□□ -0.87
LINC00348-201ENST00000428761 RAD21O60216 631 aa9.63□□□□□ -0.87
LINC00348-201ENST00000428761 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
LINC00348-201ENST00000428761 SCARF1Q14162 830 aa9.63□□□□□ -0.87
LINC00348-201ENST00000428761 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
LINC00348-201ENST00000428761 ADAM32Q8TC27 787 aa9.63□□□□□ -0.87
LINC00348-201ENST00000428761 POM121Q96HA1 1249 aa9.63□□□□□ -0.87
LINC00348-201ENST00000428761 PURBQ96QR8 312 aaKnown RBP9.63□□□□□ -0.87
LINC00348-201ENST00000428761 SERPINA10Q9UK55 444 aa9.63□□□□□ -0.87
LINC00348-201ENST00000428761 ERBB4Q15303 1308 aa9.62□□□□□ -0.87
LINC00348-201ENST00000428761 MAP4K5Q9Y4K4 846 aa9.62□□□□□ -0.87
LINC00348-201ENST00000428761 NDUFB9Q9Y6M9 179 aa9.62□□□□□ -0.87
LINC00348-201ENST00000428761 NPM2Q86SE8 214 aaKnown RBP9.61□□□□□ -0.87
LINC00348-201ENST00000428761 ZBBXA8MT70 800 aa9.6□□□□□ -0.87
LINC00348-201ENST00000428761 NR3C2P08235 984 aa9.6□□□□□ -0.87
LINC00348-201ENST00000428761 TIMP2P16035 220 aa9.6□□□□□ -0.87
LINC00348-201ENST00000428761 NR5A1Q13285 461 aa9.6□□□□□ -0.87
LINC00348-201ENST00000428761 VASH1Q7L8A9 365 aaPredicted RBP9.6□□□□□ -0.87
LINC00348-201ENST00000428761 KLF16Q9BXK1 252 aaPredicted RBP9.6□□□□□ -0.87
LINC00348-201ENST00000428761 SOBPA7XYQ1 873 aa9.59□□□□□ -0.87
LINC00348-201ENST00000428761 FBXO45P0C2W1 286 aa9.59□□□□□ -0.87
LINC00348-201ENST00000428761 LORP23490 312 aaPredicted RBP9.59□□□□□ -0.87
LINC00348-201ENST00000428761 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
LINC00348-201ENST00000428761 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
LINC00348-201ENST00000428761 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
LINC00348-201ENST00000428761 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
LINC00348-201ENST00000428761 CCDC97Q96F63 343 aaPredicted RBP9.57□□□□□ -0.88
LINC00348-201ENST00000428761 FSHRP23945 695 aa9.56□□□□□ -0.88
LINC00348-201ENST00000428761 NR1H3Q13133 447 aa9.56□□□□□ -0.88
LINC00348-201ENST00000428761 KCTD15Q96SI1 283 aaPredicted RBP9.56□□□□□ -0.88
LINC00348-201ENST00000428761 CDV3Q9UKY7 258 aaKnown RBP9.56□□□□□ -0.88
LINC00348-201ENST00000428761 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
LINC00348-201ENST00000428761 ZIC2O95409 532 aaPredicted RBP9.55□□□□□ -0.88
LINC00348-201ENST00000428761 IRF5Q13568 498 aa9.55□□□□□ -0.88
LINC00348-201ENST00000428761 DZIP3Q86Y13 1208 aaKnown RBP9.55□□□□□ -0.88
LINC00348-201ENST00000428761 ZFAND3Q9H8U3 227 aa9.55□□□□□ -0.88
LINC00348-201ENST00000428761 GDPD2Q9HCC8 539 aa9.55□□□□□ -0.88
LINC00348-201ENST00000428761 C6orf118Q5T5N4 469 aa9.54□□□□□ -0.88
LINC00348-201ENST00000428761 PRM3Q9NNZ6 103 aa9.54□□□□□ -0.88
LINC00348-201ENST00000428761 MAN1A2O60476 641 aa9.53□□□□□ -0.88
LINC00348-201ENST00000428761 ITPKCQ96DU7 683 aa9.53□□□□□ -0.88
LINC00348-201ENST00000428761 INTS6LQ5JSJ4 861 aaKnown RBP9.52□□□□□ -0.89
LINC00348-201ENST00000428761 CCDC116Q8IYX3 515 aa9.52□□□□□ -0.89
LINC00348-201ENST00000428761 KCTD17Q8N5Z5 321 aa9.52□□□□□ -0.89
LINC00348-201ENST00000428761 PCDHB9Q9Y5E1 797 aa9.52□□□□□ -0.89
LINC00348-201ENST00000428761 ESPNB1AK53 854 aa9.51□□□□□ -0.89
LINC00348-201ENST00000428761 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
LINC00348-201ENST00000428761 ZNF330Q9Y3S2 320 aaPredicted RBP9.51□□□□□ -0.89
LINC00348-201ENST00000428761 ABL2P42684 1182 aa9.5□□□□□ -0.89
LINC00348-201ENST00000428761 NBPF20Q3BBV1 942 aa9.5□□□□□ -0.89
LINC00348-201ENST00000428761 EMILIN1Q9Y6C2 1016 aa9.5□□□□□ -0.89
LINC00348-201ENST00000428761 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
LINC00348-201ENST00000428761 UPP2O95045 317 aa9.49□□□□□ -0.89
LINC00348-201ENST00000428761 BMP2P12643 396 aa9.49□□□□□ -0.89
LINC00348-201ENST00000428761 MCCD1P59942 119 aaPredicted RBP9.48□□□□□ -0.89
LINC00348-201ENST00000428761 VSIG8P0DPA2 414 aa9.47□□□□□ -0.89
LINC00348-201ENST00000428761 DHX9Q08211 1270 aaKnown RBP9.47□□□□□ -0.89
LINC00348-201ENST00000428761 ERVH48-1M5A8F1 160 aa9.46□□□□□ -0.9
LINC00348-201ENST00000428761 RAB15P59190 212 aa9.46□□□□□ -0.9
LINC00348-201ENST00000428761 VAC14Q08AM6 782 aa9.46□□□□□ -0.9
LINC00348-201ENST00000428761 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
LINC00348-201ENST00000428761 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
LINC00348-201ENST00000428761 PPFIA3O75145 1194 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms