RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 WDR17Q8IZU2 1322 aa16.95■□□□□ 0.3
TTC3-208ENST00000428693 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
TTC3-208ENST00000428693 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
TTC3-208ENST00000428693 TERF2IPQ9NYB0 399 aa16.94■□□□□ 0.3
TTC3-208ENST00000428693 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
TTC3-208ENST00000428693 RGPD5Q99666 1765 aa16.92■□□□□ 0.3
TTC3-208ENST00000428693 NLRP2Q9NX02 1062 aa16.91■□□□□ 0.3
TTC3-208ENST00000428693 MON2Q7Z3U7 1717 aa16.9■□□□□ 0.3
TTC3-208ENST00000428693 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
TTC3-208ENST00000428693 COL18A1P39060 1754 aa16.9■□□□□ 0.3
TTC3-208ENST00000428693 OVOS2A0A0G2JMS6 1433 aa16.9■□□□□ 0.3
TTC3-208ENST00000428693 OVOS2A0A0J9YW53 1432 aa16.9■□□□□ 0.3
TTC3-208ENST00000428693 DISP2A7MBM2 1401 aa16.9■□□□□ 0.3
TTC3-208ENST00000428693 OVOS2Q6IE36 1432 aa16.9■□□□□ 0.3
TTC3-208ENST00000428693 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
TTC3-208ENST00000428693 C11orf95C9JLR9 678 aaPredicted RBP16.89■□□□□ 0.29
TTC3-208ENST00000428693 CDCA7Q9BWT1 371 aaPredicted RBP16.89■□□□□ 0.29
TTC3-208ENST00000428693 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
TTC3-208ENST00000428693 PCGF6Q9BYE7 350 aa16.89■□□□□ 0.29
TTC3-208ENST00000428693 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
TTC3-208ENST00000428693 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
TTC3-208ENST00000428693 NFAT5O94916 1531 aa16.88■□□□□ 0.29
TTC3-208ENST00000428693 EXOC5O00471 708 aa16.88■□□□□ 0.29
TTC3-208ENST00000428693 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
TTC3-208ENST00000428693 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
TTC3-208ENST00000428693 LRRC37A3O60309 1634 aa16.87■□□□□ 0.29
TTC3-208ENST00000428693 MARCH10Q8NA82 808 aaPredicted RBP16.86■□□□□ 0.29
TTC3-208ENST00000428693 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
TTC3-208ENST00000428693 TESK2Q96S53 571 aa16.86■□□□□ 0.29
TTC3-208ENST00000428693 USP31Q70CQ4 1352 aa16.86■□□□□ 0.29
TTC3-208ENST00000428693 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
TTC3-208ENST00000428693 ANKRD24Q8TF21 1146 aa16.85■□□□□ 0.29
TTC3-208ENST00000428693 CCDC7Q96M83 1385 aa16.85■□□□□ 0.29
TTC3-208ENST00000428693 COG3Q96JB2 828 aa16.84■□□□□ 0.29
TTC3-208ENST00000428693 PUS7Q96PZ0 661 aaKnown RBP16.84■□□□□ 0.29
TTC3-208ENST00000428693 LRP5O75197 1615 aa16.83■□□□□ 0.28
TTC3-208ENST00000428693 LTN1O94822 1766 aa16.83■□□□□ 0.28
TTC3-208ENST00000428693 ERBB3P21860 1342 aa16.83■□□□□ 0.28
TTC3-208ENST00000428693 TMF1P82094 1093 aa16.83■□□□□ 0.28
TTC3-208ENST00000428693 PTF1AQ7RTS3 328 aa16.83■□□□□ 0.28
TTC3-208ENST00000428693 WNK3Q9BYP7 1800 aa16.83■□□□□ 0.28
TTC3-208ENST00000428693 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
TTC3-208ENST00000428693 USP47Q96K76 1375 aa16.82■□□□□ 0.28
TTC3-208ENST00000428693 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
TTC3-208ENST00000428693 IL2RBP14784 551 aa16.81■□□□□ 0.28
TTC3-208ENST00000428693 AMPHP49418 695 aa16.81■□□□□ 0.28
TTC3-208ENST00000428693 ACSBG1Q96GR2 724 aa16.81■□□□□ 0.28
TTC3-208ENST00000428693 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
TTC3-208ENST00000428693 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
TTC3-208ENST00000428693 NUP188Q5SRE5 1749 aa16.8■□□□□ 0.28
TTC3-208ENST00000428693 PEAK1Q9H792 1746 aa16.8■□□□□ 0.28
TTC3-208ENST00000428693 FBLN1P23142 703 aa16.8■□□□□ 0.28
TTC3-208ENST00000428693 RREB1Q92766 1687 aa16.79■□□□□ 0.28
TTC3-208ENST00000428693 PLSCR1O15162 318 aa16.79■□□□□ 0.28
TTC3-208ENST00000428693 ABCC6O95255 1503 aa16.79■□□□□ 0.28
TTC3-208ENST00000428693 IP6K1Q92551 441 aa16.78■□□□□ 0.28
TTC3-208ENST00000428693 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
TTC3-208ENST00000428693 GGNBP2Q9H3C7 697 aa16.78■□□□□ 0.28
TTC3-208ENST00000428693 PPP1R1BQ9UD71 204 aaPredicted RBP16.78■□□□□ 0.28
TTC3-208ENST00000428693 KCNQ2O43526 872 aa16.77■□□□□ 0.28
TTC3-208ENST00000428693 CDCA8Q53HL2 280 aa16.77■□□□□ 0.28
TTC3-208ENST00000428693 DDX54Q8TDD1 881 aaKnown RBP16.77■□□□□ 0.28
TTC3-208ENST00000428693 USP54Q70EL1 1684 aa16.77■□□□□ 0.28
TTC3-208ENST00000428693 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
TTC3-208ENST00000428693 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.27
TTC3-208ENST00000428693 MAP3K19Q56UN5 1328 aa16.75■□□□□ 0.27
TTC3-208ENST00000428693 RRS1Q15050 365 aaKnown RBP16.75■□□□□ 0.27
TTC3-208ENST00000428693 HOXC9P31274 260 aa16.74■□□□□ 0.27
TTC3-208ENST00000428693 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
TTC3-208ENST00000428693 SPON1Q9HCB6 807 aa16.74■□□□□ 0.27
TTC3-208ENST00000428693 ANO8Q9HCE9 1232 aaPredicted RBP16.74■□□□□ 0.27
TTC3-208ENST00000428693 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
TTC3-208ENST00000428693 FYB1O15117 783 aa16.72■□□□□ 0.27
TTC3-208ENST00000428693 PROM2Q8N271 834 aa16.72■□□□□ 0.27
TTC3-208ENST00000428693 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
TTC3-208ENST00000428693 BCL9O00512 1426 aa16.71■□□□□ 0.27
TTC3-208ENST00000428693 ZBTB7AO95365 584 aa16.7■□□□□ 0.26
TTC3-208ENST00000428693 USHBP1Q8N6Y0 703 aa16.7■□□□□ 0.26
TTC3-208ENST00000428693 CCER1Q8TC90 406 aaPredicted RBP16.7■□□□□ 0.26
TTC3-208ENST00000428693 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
TTC3-208ENST00000428693 RGPD3A6NKT7 1758 aaPredicted RBP16.69■□□□□ 0.26
TTC3-208ENST00000428693 RGPD4Q7Z3J3 1758 aa16.69■□□□□ 0.26
TTC3-208ENST00000428693 PPM1GO15355 546 aaPredicted RBP16.68■□□□□ 0.26
TTC3-208ENST00000428693 PDGFDQ9GZP0 370 aaPredicted RBP16.68■□□□□ 0.26
TTC3-208ENST00000428693 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
TTC3-208ENST00000428693 SMG6Q86US8 1419 aaKnown RBP16.68■□□□□ 0.26
TTC3-208ENST00000428693 NHSQ6T4R5 1651 aa16.67■□□□□ 0.26
TTC3-208ENST00000428693 SLC15A2Q16348 729 aa16.67■□□□□ 0.26
TTC3-208ENST00000428693 ZCRB1Q8TBF4 217 aaKnown RBP16.67■□□□□ 0.26
TTC3-208ENST00000428693 FAM208AQ9UK61 1670 aaKnown RBP16.66■□□□□ 0.26
TTC3-208ENST00000428693 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
TTC3-208ENST00000428693 NBPF6Q5VWK0 638 aa16.66■□□□□ 0.26
TTC3-208ENST00000428693 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
TTC3-208ENST00000428693 NBPF4Q96M43 638 aa16.66■□□□□ 0.26
TTC3-208ENST00000428693 NSD3Q9BZ95 1437 aa16.66■□□□□ 0.26
TTC3-208ENST00000428693 RGPD2P0DJD1 1756 aa16.66■□□□□ 0.26
TTC3-208ENST00000428693 CLSPNQ9HAW4 1339 aa16.66■□□□□ 0.26
TTC3-208ENST00000428693 RTL1A6NKG5 1358 aa16.65■□□□□ 0.26
TTC3-208ENST00000428693 HSP90AB2PQ58FF8 381 aa16.65■□□□□ 0.26
TTC3-208ENST00000428693 KIF20BQ96Q89 1820 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms