RNA–Protein interactions for RNA: ENST00000428549.8

ABCA8-202, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-202ENST00000428549 ZMYND10O75800 440 aa11.53□□□□□ -0.56
ABCA8-202ENST00000428549 POTEHQ6S545 545 aa11.53□□□□□ -0.56
ABCA8-202ENST00000428549 PIK3R4Q99570 1358 aa11.53□□□□□ -0.56
ABCA8-202ENST00000428549 SBNO2Q9Y2G9 1366 aa11.53□□□□□ -0.56
ABCA8-202ENST00000428549 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
ABCA8-202ENST00000428549 APBB1IPQ7Z5R6 666 aaPredicted RBP11.53□□□□□ -0.56
ABCA8-202ENST00000428549 DIP2AQ14689 1571 aa11.52□□□□□ -0.56
ABCA8-202ENST00000428549 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
ABCA8-202ENST00000428549 DRC1Q96MC2 740 aa11.52□□□□□ -0.57
ABCA8-202ENST00000428549 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
ABCA8-202ENST00000428549 DLC1Q96QB1 1528 aa11.51□□□□□ -0.57
ABCA8-202ENST00000428549 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
ABCA8-202ENST00000428549 SIRT1Q96EB6 747 aa11.51□□□□□ -0.57
ABCA8-202ENST00000428549 TESK2Q96S53 571 aa11.51□□□□□ -0.57
ABCA8-202ENST00000428549 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
ABCA8-202ENST00000428549 KIF7Q2M1P5 1343 aa11.51□□□□□ -0.57
ABCA8-202ENST00000428549 YTHDC2Q9H6S0 1430 aaKnown RBP11.51□□□□□ -0.57
ABCA8-202ENST00000428549 IQSEC2Q5JU85 1478 aa11.5□□□□□ -0.57
ABCA8-202ENST00000428549 GTPBP6O43824 516 aaPredicted RBP11.5□□□□□ -0.57
ABCA8-202ENST00000428549 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
ABCA8-202ENST00000428549 KDM4CQ9H3R0 1056 aa11.5□□□□□ -0.57
ABCA8-202ENST00000428549 KNDC1Q76NI1 1749 aa11.5□□□□□ -0.57
ABCA8-202ENST00000428549 METP08581 1390 aa11.5□□□□□ -0.57
ABCA8-202ENST00000428549 LRPPRCP42704 1394 aaKnown RBP11.5□□□□□ -0.57
ABCA8-202ENST00000428549 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 HMGB1P1B2RPK0 211 aaPredicted RBP11.49□□□□□ -0.57
ABCA8-202ENST00000428549 C11orf95C9JLR9 678 aaPredicted RBP11.49□□□□□ -0.57
ABCA8-202ENST00000428549 TMEM132EQ6IEE7 984 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 MICAL1Q8TDZ2 1067 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
ABCA8-202ENST00000428549 TMF1P82094 1093 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 TSHZ1Q6ZSZ6 1077 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 LRRC7Q96NW7 1537 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
ABCA8-202ENST00000428549 CHD2O14647 1828 aaKnown RBP11.48□□□□□ -0.57
ABCA8-202ENST00000428549 CENPJQ9HC77 1338 aaPredicted RBP11.48□□□□□ -0.57
ABCA8-202ENST00000428549 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
ABCA8-202ENST00000428549 ONECUT3O60422 494 aaPredicted RBP11.48□□□□□ -0.57
ABCA8-202ENST00000428549 TECPR2O15040 1411 aa11.48□□□□□ -0.57
ABCA8-202ENST00000428549 NKTRP30414 1462 aaKnown RBP11.48□□□□□ -0.57
ABCA8-202ENST00000428549 DDX10Q13206 875 aaKnown RBP11.47□□□□□ -0.57
ABCA8-202ENST00000428549 NKX1-1Q15270 411 aaPredicted RBP11.47□□□□□ -0.57
ABCA8-202ENST00000428549 CDCA8Q53HL2 280 aa11.47□□□□□ -0.57
ABCA8-202ENST00000428549 RBM26Q5T8P6 1007 aaKnown RBP11.47□□□□□ -0.57
ABCA8-202ENST00000428549 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
ABCA8-202ENST00000428549 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
ABCA8-202ENST00000428549 NWD1Q149M9 1564 aa11.46□□□□□ -0.57
ABCA8-202ENST00000428549 PTPRUQ92729 1446 aa11.46□□□□□ -0.57
ABCA8-202ENST00000428549 RINLQ6ZS11 566 aa11.46□□□□□ -0.57
ABCA8-202ENST00000428549 UBA5Q9GZZ9 404 aa11.46□□□□□ -0.57
ABCA8-202ENST00000428549 TMEM94Q12767 1356 aa11.46□□□□□ -0.58
ABCA8-202ENST00000428549 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.58
ABCA8-202ENST00000428549 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.58
ABCA8-202ENST00000428549 TOM1O60784 492 aa11.46□□□□□ -0.58
ABCA8-202ENST00000428549 GTF2E1P29083 439 aaPredicted RBP11.46□□□□□ -0.58
ABCA8-202ENST00000428549 FAM135BQ49AJ0 1406 aa11.45□□□□□ -0.58
ABCA8-202ENST00000428549 UBAP1LF5GYI3 381 aa11.45□□□□□ -0.58
ABCA8-202ENST00000428549 MYBPC2Q14324 1141 aa11.45□□□□□ -0.58
ABCA8-202ENST00000428549 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
ABCA8-202ENST00000428549 NCOA3Q9Y6Q9 1424 aa11.44□□□□□ -0.58
ABCA8-202ENST00000428549 CNGB1Q14028 1251 aaPredicted RBP11.44□□□□□ -0.58
ABCA8-202ENST00000428549 MORC4Q8TE76 937 aa11.44□□□□□ -0.58
ABCA8-202ENST00000428549 SREK1Q8WXA9 508 aaKnown RBP11.43□□□□□ -0.58
ABCA8-202ENST00000428549 KCNA1Q09470 495 aa11.42□□□□□ -0.58
ABCA8-202ENST00000428549 MTA3Q9BTC8 594 aa11.42□□□□□ -0.58
ABCA8-202ENST00000428549 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
ABCA8-202ENST00000428549 STK26Q9P289 416 aa11.42□□□□□ -0.58
ABCA8-202ENST00000428549 XRN1Q8IZH2 1706 aaKnown RBP11.42□□□□□ -0.58
ABCA8-202ENST00000428549 AXDND1Q5T1B0 1012 aaPredicted RBP11.42□□□□□ -0.58
ABCA8-202ENST00000428549 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
ABCA8-202ENST00000428549 MSH6P52701 1360 aa11.42□□□□□ -0.58
ABCA8-202ENST00000428549 PTCH1Q13635 1447 aa11.41□□□□□ -0.58
ABCA8-202ENST00000428549 MMP14P50281 582 aa11.41□□□□□ -0.58
ABCA8-202ENST00000428549 PRAM1Q96QH2 718 aa11.41□□□□□ -0.58
ABCA8-202ENST00000428549 TULP4Q9NRJ4 1543 aa11.41□□□□□ -0.58
ABCA8-202ENST00000428549 XIRP1Q702N8 1843 aaKnown RBP11.4□□□□□ -0.58
ABCA8-202ENST00000428549 ROBO2Q9HCK4 1378 aa11.4□□□□□ -0.58
ABCA8-202ENST00000428549 EVC2Q86UK5 1308 aa11.4□□□□□ -0.58
ABCA8-202ENST00000428549 TTC36A6NLP5 189 aa11.4□□□□□ -0.58
ABCA8-202ENST00000428549 TSR1Q2NL82 804 aaKnown RBP11.4□□□□□ -0.58
ABCA8-202ENST00000428549 LONRF3Q496Y0 759 aa11.4□□□□□ -0.58
ABCA8-202ENST00000428549 POGKQ9P215 609 aa11.4□□□□□ -0.58
ABCA8-202ENST00000428549 MYOM1P52179 1685 aa11.4□□□□□ -0.59
ABCA8-202ENST00000428549 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
ABCA8-202ENST00000428549 ATF3P18847 181 aa11.39□□□□□ -0.59
ABCA8-202ENST00000428549 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
ABCA8-202ENST00000428549 ADGRB2O60241 1585 aa11.39□□□□□ -0.59
ABCA8-202ENST00000428549 PIP4K2BP78356 416 aa11.38□□□□□ -0.59
ABCA8-202ENST00000428549 POLA2Q14181 598 aa11.38□□□□□ -0.59
ABCA8-202ENST00000428549 NBPF11Q86T75 865 aa11.38□□□□□ -0.59
ABCA8-202ENST00000428549 FOXD4Q12950 439 aaPredicted RBP11.38□□□□□ -0.59
ABCA8-202ENST00000428549 KRBA2Q6ZNG9 492 aa11.38□□□□□ -0.59
ABCA8-202ENST00000428549 AK7Q96M32 723 aa11.38□□□□□ -0.59
ABCA8-202ENST00000428549 PLEKHH1Q9ULM0 1364 aa11.37□□□□□ -0.59
ABCA8-202ENST00000428549 NINLQ9Y2I6 1382 aa11.37□□□□□ -0.59
ABCA8-202ENST00000428549 ANP32CO43423 234 aa11.37□□□□□ -0.59
ABCA8-202ENST00000428549 CASC1Q6TDU7 716 aa11.37□□□□□ -0.59
ABCA8-202ENST00000428549 WAPLQ7Z5K2 1190 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms