RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 GCP02774 474 aa20.51■□□□□ 0.87
TVP23C-203ENST00000428082 ADAMTS8Q9UP79 889 aa20.51■□□□□ 0.87
TVP23C-203ENST00000428082 PEAK1Q9H792 1746 aa20.5■□□□□ 0.87
TVP23C-203ENST00000428082 COL16A1Q07092 1604 aaPredicted RBP20.5■□□□□ 0.87
TVP23C-203ENST00000428082 CABLES1Q8TDN4 633 aa20.5■□□□□ 0.87
TVP23C-203ENST00000428082 MAP3K19Q56UN5 1328 aa20.5■□□□□ 0.87
TVP23C-203ENST00000428082 LTN1O94822 1766 aa20.5■□□□□ 0.87
TVP23C-203ENST00000428082 KCNH5Q8NCM2 988 aa20.49■□□□□ 0.87
TVP23C-203ENST00000428082 LRRC59Q96AG4 307 aaKnown RBP20.49■□□□□ 0.87
TVP23C-203ENST00000428082 NGEFQ8N5V2 710 aa20.48■□□□□ 0.87
TVP23C-203ENST00000428082 CDCA7LQ96GN5 454 aa20.48■□□□□ 0.87
TVP23C-203ENST00000428082 CFAP53Q96M91 514 aa20.48■□□□□ 0.87
TVP23C-203ENST00000428082 COL3A1P02461 1466 aaPredicted RBP20.48■□□□□ 0.87
TVP23C-203ENST00000428082 PNPLA6Q8IY17 1366 aa20.48■□□□□ 0.87
TVP23C-203ENST00000428082 SHPRHQ149N8 1683 aa20.47■□□□□ 0.87
TVP23C-203ENST00000428082 CDK12Q9NYV4 1490 aaPredicted RBP20.47■□□□□ 0.87
TVP23C-203ENST00000428082 EXOC6Q8TAG9 804 aa20.47■□□□□ 0.87
TVP23C-203ENST00000428082 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
TVP23C-203ENST00000428082 ABCA3Q99758 1704 aa20.46■□□□□ 0.87
TVP23C-203ENST00000428082 AMPHP49418 695 aa20.44■□□□□ 0.86
TVP23C-203ENST00000428082 ZBTB7CA1YPR0 619 aa20.43■□□□□ 0.86
TVP23C-203ENST00000428082 ZC3H6P61129 1189 aaKnown RBP20.43■□□□□ 0.86
TVP23C-203ENST00000428082 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
TVP23C-203ENST00000428082 FLT4P35916 1363 aa20.43■□□□□ 0.86
TVP23C-203ENST00000428082 GOLGA2Q08379 1002 aa20.43■□□□□ 0.86
TVP23C-203ENST00000428082 ARHGEF25Q86VW2 580 aa20.43■□□□□ 0.86
TVP23C-203ENST00000428082 ANP32AP39687 249 aaKnown RBP20.42■□□□□ 0.86
TVP23C-203ENST00000428082 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.42■□□□□ 0.86
TVP23C-203ENST00000428082 COL22A1Q8NFW1 1626 aaPredicted RBP20.42■□□□□ 0.86
TVP23C-203ENST00000428082 ZNF521Q96K83 1311 aa20.41■□□□□ 0.86
TVP23C-203ENST00000428082 DIAPH1O60610 1272 aaKnown RBP20.41■□□□□ 0.86
TVP23C-203ENST00000428082 MS4A1P11836 297 aa20.41■□□□□ 0.86
TVP23C-203ENST00000428082 HOXC9P31274 260 aa20.41■□□□□ 0.86
TVP23C-203ENST00000428082 KIF24Q5T7B8 1368 aa20.41■□□□□ 0.86
TVP23C-203ENST00000428082 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
TVP23C-203ENST00000428082 HAP1P54257 671 aaPredicted RBP20.39■□□□□ 0.85
TVP23C-203ENST00000428082 IP6K1Q92551 441 aa20.39■□□□□ 0.85
TVP23C-203ENST00000428082 IL13P35225 146 aa20.38■□□□□ 0.85
TVP23C-203ENST00000428082 KIAA0232Q92628 1395 aa20.38■□□□□ 0.85
TVP23C-203ENST00000428082 EIF4A2Q14240 407 aaKnown RBP20.37■□□□□ 0.85
TVP23C-203ENST00000428082 DUSP27Q5VZP5 1158 aa20.37■□□□□ 0.85
TVP23C-203ENST00000428082 RGPD5Q99666 1765 aa20.37■□□□□ 0.85
TVP23C-203ENST00000428082 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
TVP23C-203ENST00000428082 CPDO75976 1380 aa20.37■□□□□ 0.85
TVP23C-203ENST00000428082 COL18A1P39060 1754 aa20.36■□□□□ 0.85
TVP23C-203ENST00000428082 HSPA1LP34931 641 aa20.35■□□□□ 0.85
TVP23C-203ENST00000428082 CHRNA2Q15822 529 aa20.35■□□□□ 0.85
TVP23C-203ENST00000428082 AXIN2Q9Y2T1 843 aa20.35■□□□□ 0.85
TVP23C-203ENST00000428082 NOP58Q9Y2X3 529 aaKnown RBP20.35■□□□□ 0.85
TVP23C-203ENST00000428082 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
TVP23C-203ENST00000428082 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
TVP23C-203ENST00000428082 SLFN5Q08AF3 891 aa20.34■□□□□ 0.85
TVP23C-203ENST00000428082 LTV1Q96GA3 475 aaPredicted RBP20.33■□□□□ 0.85
TVP23C-203ENST00000428082 CRBNQ96SW2 442 aa20.33■□□□□ 0.85
TVP23C-203ENST00000428082 PRDM11Q9NQV5 511 aa20.33■□□□□ 0.84
TVP23C-203ENST00000428082 RGPD1P0DJD0 1748 aa20.33■□□□□ 0.84
TVP23C-203ENST00000428082 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
TVP23C-203ENST00000428082 IPO9Q96P70 1041 aaKnown RBP20.32■□□□□ 0.84
TVP23C-203ENST00000428082 JCADQ9P266 1359 aa20.32■□□□□ 0.84
TVP23C-203ENST00000428082 E9PSI1 815 aa20.31■□□□□ 0.84
TVP23C-203ENST00000428082 CCDC146Q8IYE0 955 aa20.31■□□□□ 0.84
TVP23C-203ENST00000428082 ABCC6O95255 1503 aa20.31■□□□□ 0.84
TVP23C-203ENST00000428082 PLIN1O60240 522 aa20.3■□□□□ 0.84
TVP23C-203ENST00000428082 LMO7Q8WWI1 1683 aa20.3■□□□□ 0.84
TVP23C-203ENST00000428082 RGPD2P0DJD1 1756 aa20.3■□□□□ 0.84
TVP23C-203ENST00000428082 HMOX1P09601 288 aa20.29■□□□□ 0.84
TVP23C-203ENST00000428082 FAM83GA6ND36 823 aa20.29■□□□□ 0.84
TVP23C-203ENST00000428082 NUTM2BA6NNL0 878 aaPredicted RBP20.29■□□□□ 0.84
TVP23C-203ENST00000428082 NUTM2EB1AL46 878 aaPredicted RBP20.29■□□□□ 0.84
TVP23C-203ENST00000428082 NUTM2AQ8IVF1 878 aaPredicted RBP20.29■□□□□ 0.84
TVP23C-203ENST00000428082 ANKRD24Q8TF21 1146 aa20.29■□□□□ 0.84
TVP23C-203ENST00000428082 EYA1Q99502 592 aa20.28■□□□□ 0.84
TVP23C-203ENST00000428082 CAMTA1Q9Y6Y1 1673 aa20.28■□□□□ 0.84
TVP23C-203ENST00000428082 APAF1O14727 1248 aa20.27■□□□□ 0.84
TVP23C-203ENST00000428082 ERBB3P21860 1342 aa20.27■□□□□ 0.84
TVP23C-203ENST00000428082 IGSF1Q8N6C5 1336 aa20.26■□□□□ 0.83
TVP23C-203ENST00000428082 ADAMTS2O95450 1211 aa20.26■□□□□ 0.83
TVP23C-203ENST00000428082 CENPQQ7L2Z9 268 aaPredicted RBP20.26■□□□□ 0.83
TVP23C-203ENST00000428082 AEBP1Q8IUX7 1158 aa20.26■□□□□ 0.83
TVP23C-203ENST00000428082 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
TVP23C-203ENST00000428082 FCHSD2O94868 740 aa20.25■□□□□ 0.83
TVP23C-203ENST00000428082 PDE4AP27815 886 aa20.25■□□□□ 0.83
TVP23C-203ENST00000428082 SULT6B1Q6IMI4 303 aa20.25■□□□□ 0.83
TVP23C-203ENST00000428082 COL14A1Q05707 1796 aaKnown RBP20.25■□□□□ 0.83
TVP23C-203ENST00000428082 NBPF6Q5VWK0 638 aa20.25■□□□□ 0.83
TVP23C-203ENST00000428082 NBPF4Q96M43 638 aa20.25■□□□□ 0.83
TVP23C-203ENST00000428082 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
TVP23C-203ENST00000428082 ZBTB47Q9UFB7 747 aaPredicted RBP20.25■□□□□ 0.83
TVP23C-203ENST00000428082 RUNDC1Q96C34 613 aa20.24■□□□□ 0.83
TVP23C-203ENST00000428082 BACH2Q9BYV9 841 aa20.24■□□□□ 0.83
TVP23C-203ENST00000428082 PRKAR2BP31323 418 aa20.23■□□□□ 0.83
TVP23C-203ENST00000428082 USHBP1Q8N6Y0 703 aa20.23■□□□□ 0.83
TVP23C-203ENST00000428082 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
TVP23C-203ENST00000428082 COL5A2P05997 1499 aaPredicted RBP20.22■□□□□ 0.83
TVP23C-203ENST00000428082 KDRP35968 1356 aa20.22■□□□□ 0.83
TVP23C-203ENST00000428082 SPATA31A6Q5VVP1 1343 aa20.22■□□□□ 0.83
TVP23C-203ENST00000428082 PLCH1Q4KWH8 1693 aa20.21■□□□□ 0.83
TVP23C-203ENST00000428082 FAM208AQ9UK61 1670 aaKnown RBP20.21■□□□□ 0.83
TVP23C-203ENST00000428082 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
TVP23C-203ENST00000428082 BTG4Q9NY30 223 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms