RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
HDLBP-213ENST00000427007 OVOS2A0A0G2JMS6 1433 aa14.58□□□□□ -0.07
HDLBP-213ENST00000427007 OVOS2A0A0J9YW53 1432 aa14.58□□□□□ -0.07
HDLBP-213ENST00000427007 OVOS2Q6IE36 1432 aa14.58□□□□□ -0.07
HDLBP-213ENST00000427007 WDR17Q8IZU2 1322 aa14.58□□□□□ -0.08
HDLBP-213ENST00000427007 NFAT5O94916 1531 aa14.57□□□□□ -0.08
HDLBP-213ENST00000427007 DDB1Q16531 1140 aa14.57□□□□□ -0.08
HDLBP-213ENST00000427007 ARHGEF25Q86VW2 580 aa14.57□□□□□ -0.08
HDLBP-213ENST00000427007 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
HDLBP-213ENST00000427007 TTC21AQ8NDW8 1320 aa14.57□□□□□ -0.08
HDLBP-213ENST00000427007 CSB-PGBD3P0DP91 1061 aa14.56□□□□□ -0.08
HDLBP-213ENST00000427007 CARD11Q9BXL7 1154 aa14.56□□□□□ -0.08
HDLBP-213ENST00000427007 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
HDLBP-213ENST00000427007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDLBP-213ENST00000427007 RGPD3A6NKT7 1758 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-213ENST00000427007 RGPD4Q7Z3J3 1758 aa14.55□□□□□ -0.08
HDLBP-213ENST00000427007 LTN1O94822 1766 aa14.54□□□□□ -0.08
HDLBP-213ENST00000427007 USP54Q70EL1 1684 aa14.53□□□□□ -0.08
HDLBP-213ENST00000427007 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
HDLBP-213ENST00000427007 SBNO2Q9Y2G9 1366 aa14.53□□□□□ -0.08
HDLBP-213ENST00000427007 C11orf95C9JLR9 678 aaPredicted RBP14.53□□□□□ -0.08
HDLBP-213ENST00000427007 PTF1AQ7RTS3 328 aa14.53□□□□□ -0.08
HDLBP-213ENST00000427007 TONSLQ96HA7 1378 aa14.52□□□□□ -0.08
HDLBP-213ENST00000427007 MARCH10Q8NA82 808 aaPredicted RBP14.52□□□□□ -0.09
HDLBP-213ENST00000427007 TMC1Q8TDI8 760 aa14.52□□□□□ -0.09
HDLBP-213ENST00000427007 CARD10Q9BWT7 1032 aa14.52□□□□□ -0.09
HDLBP-213ENST00000427007 NME9Q86XW9 330 aa14.51□□□□□ -0.09
HDLBP-213ENST00000427007 CDCA7Q9BWT1 371 aaPredicted RBP14.51□□□□□ -0.09
HDLBP-213ENST00000427007 ABCC6O95255 1503 aa14.51□□□□□ -0.09
HDLBP-213ENST00000427007 USP31Q70CQ4 1352 aa14.49□□□□□ -0.09
HDLBP-213ENST00000427007 PLSCR1O15162 318 aa14.49□□□□□ -0.09
HDLBP-213ENST00000427007 HDGFL2Q7Z4V5 671 aaPredicted RBP14.49□□□□□ -0.09
HDLBP-213ENST00000427007 BCL11BQ9C0K0 894 aaPredicted RBP14.49□□□□□ -0.09
HDLBP-213ENST00000427007 SLC12A5Q9H2X9 1139 aa14.49□□□□□ -0.09
HDLBP-213ENST00000427007 CCDC7Q96M83 1385 aa14.48□□□□□ -0.09
HDLBP-213ENST00000427007 EXOC5O00471 708 aa14.48□□□□□ -0.09
HDLBP-213ENST00000427007 ANO8Q9HCE9 1232 aaPredicted RBP14.48□□□□□ -0.09
HDLBP-213ENST00000427007 TNS2Q63HR2 1409 aa14.48□□□□□ -0.09
HDLBP-213ENST00000427007 A0A1W2PP64 1363 aa14.47□□□□□ -0.09
HDLBP-213ENST00000427007 BCL9O00512 1426 aa14.47□□□□□ -0.09
HDLBP-213ENST00000427007 EDC4Q6P2E9 1401 aaKnown RBP14.47□□□□□ -0.09
HDLBP-213ENST00000427007 CASZ1Q86V15 1759 aa14.47□□□□□ -0.09
HDLBP-213ENST00000427007 ERBB3P21860 1342 aa14.46□□□□□ -0.09
HDLBP-213ENST00000427007 NHSQ6T4R5 1651 aa14.46□□□□□ -0.09
HDLBP-213ENST00000427007 SPON1Q9HCB6 807 aa14.46□□□□□ -0.09
HDLBP-213ENST00000427007 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.09
HDLBP-213ENST00000427007 KCNQ2O43526 872 aa14.45□□□□□ -0.1
HDLBP-213ENST00000427007 PROM2Q8N271 834 aa14.45□□□□□ -0.1
HDLBP-213ENST00000427007 PPP1R1BQ9UD71 204 aaPredicted RBP14.45□□□□□ -0.1
HDLBP-213ENST00000427007 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
HDLBP-213ENST00000427007 ACSBG1Q96GR2 724 aa14.44□□□□□ -0.1
HDLBP-213ENST00000427007 TERF2IPQ9NYB0 399 aa14.44□□□□□ -0.1
HDLBP-213ENST00000427007 TXNRD1Q16881 649 aa14.43□□□□□ -0.1
HDLBP-213ENST00000427007 PDGFDQ9GZP0 370 aaPredicted RBP14.43□□□□□ -0.1
HDLBP-213ENST00000427007 ST20-MTHFSA0A0A6YYL1 179 aa14.42□□□□□ -0.1
HDLBP-213ENST00000427007 IL2RBP14784 551 aa14.42□□□□□ -0.1
HDLBP-213ENST00000427007 BTAF1O14981 1849 aa14.41□□□□□ -0.1
HDLBP-213ENST00000427007 TESK2Q96S53 571 aa14.41□□□□□ -0.1
HDLBP-213ENST00000427007 FAM208AQ9UK61 1670 aaKnown RBP14.41□□□□□ -0.1
HDLBP-213ENST00000427007 MYOM1P52179 1685 aa14.4□□□□□ -0.1
HDLBP-213ENST00000427007 ZBTB7AO95365 584 aa14.4□□□□□ -0.1
HDLBP-213ENST00000427007 LTV1Q96GA3 475 aaPredicted RBP14.4□□□□□ -0.1
HDLBP-213ENST00000427007 PUS7Q96PZ0 661 aaKnown RBP14.4□□□□□ -0.1
HDLBP-213ENST00000427007 STK32BQ9NY57 414 aa14.4□□□□□ -0.1
HDLBP-213ENST00000427007 RGPD2P0DJD1 1756 aa14.39□□□□□ -0.11
HDLBP-213ENST00000427007 NINLQ9Y2I6 1382 aa14.38□□□□□ -0.11
HDLBP-213ENST00000427007 FBLN1P23142 703 aa14.38□□□□□ -0.11
HDLBP-213ENST00000427007 SLC15A2Q16348 729 aa14.38□□□□□ -0.11
HDLBP-213ENST00000427007 IP6K1Q92551 441 aa14.38□□□□□ -0.11
HDLBP-213ENST00000427007 PAPPAQ13219 1627 aa14.37□□□□□ -0.11
HDLBP-213ENST00000427007 COG3Q96JB2 828 aa14.37□□□□□ -0.11
HDLBP-213ENST00000427007 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
HDLBP-213ENST00000427007 MAP3K19Q56UN5 1328 aa14.36□□□□□ -0.11
HDLBP-213ENST00000427007 ANKRD36BQ8N2N9 1353 aa14.35□□□□□ -0.11
HDLBP-213ENST00000427007 DOT1LQ8TEK3 1739 aa14.35□□□□□ -0.11
HDLBP-213ENST00000427007 KAT6BQ8WYB5 2073 aa14.35□□□□□ -0.11
HDLBP-213ENST00000427007 YY1P25490 414 aa14.35□□□□□ -0.11
HDLBP-213ENST00000427007 HOXC9P31274 260 aa14.35□□□□□ -0.11
HDLBP-213ENST00000427007 DDX54Q8TDD1 881 aaKnown RBP14.35□□□□□ -0.11
HDLBP-213ENST00000427007 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
HDLBP-213ENST00000427007 PTGER2P43116 358 aa14.34□□□□□ -0.11
HDLBP-213ENST00000427007 AMPHP49418 695 aa14.34□□□□□ -0.11
HDLBP-213ENST00000427007 KIF20BQ96Q89 1820 aa14.34□□□□□ -0.11
HDLBP-213ENST00000427007 USP47Q96K76 1375 aa14.34□□□□□ -0.11
HDLBP-213ENST00000427007 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.12
HDLBP-213ENST00000427007 TRIM26Q12899 539 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-213ENST00000427007 SLC24A1O60721 1099 aa14.32□□□□□ -0.12
HDLBP-213ENST00000427007 TMF1P82094 1093 aa14.32□□□□□ -0.12
HDLBP-213ENST00000427007 RRS1Q15050 365 aaKnown RBP14.32□□□□□ -0.12
HDLBP-213ENST00000427007 ZNF827Q17R98 1081 aa14.32□□□□□ -0.12
HDLBP-213ENST00000427007 GGNBP2Q9H3C7 697 aa14.32□□□□□ -0.12
HDLBP-213ENST00000427007 LRRC4BQ9NT99 713 aa14.32□□□□□ -0.12
HDLBP-213ENST00000427007 MEGF6O75095 1541 aa14.31□□□□□ -0.12
HDLBP-213ENST00000427007 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
HDLBP-213ENST00000427007 MTFR1LQ9H019 292 aa14.31□□□□□ -0.12
HDLBP-213ENST00000427007 FYB1O15117 783 aa14.3□□□□□ -0.12
HDLBP-213ENST00000427007 FHDC1Q9C0D6 1143 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-213ENST00000427007 RTL1A6NKG5 1358 aa14.3□□□□□ -0.12
HDLBP-213ENST00000427007 TUBGCP6Q96RT7 1819 aa14.29□□□□□ -0.12
HDLBP-213ENST00000427007 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms