RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 RICTORQ6R327 1708 aa18.99■□□□□ 0.63
C9orf3-204ENST00000424143 MYO5BQ9ULV0 1848 aa18.98■□□□□ 0.63
C9orf3-204ENST00000424143 LMOD3Q0VAK6 560 aa18.98■□□□□ 0.63
C9orf3-204ENST00000424143 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
C9orf3-204ENST00000424143 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
C9orf3-204ENST00000424143 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
C9orf3-204ENST00000424143 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
C9orf3-204ENST00000424143 K7ELQ4 463 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-204ENST00000424143 PRAM1Q96QH2 718 aa18.96■□□□□ 0.63
C9orf3-204ENST00000424143 CPSF1Q10570 1443 aaKnown RBP18.95■□□□□ 0.62
C9orf3-204ENST00000424143 CDK19Q9BWU1 502 aa18.95■□□□□ 0.62
C9orf3-204ENST00000424143 POLKQ9UBT6 870 aa18.95■□□□□ 0.62
C9orf3-204ENST00000424143 CDC45O75419 566 aa18.94■□□□□ 0.62
C9orf3-204ENST00000424143 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
C9orf3-204ENST00000424143 SPRYD3Q8NCJ5 442 aa18.94■□□□□ 0.62
C9orf3-204ENST00000424143 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
C9orf3-204ENST00000424143 PRKAR2BP31323 418 aa18.93■□□□□ 0.62
C9orf3-204ENST00000424143 ANKRD45Q5TZF3 282 aa18.93■□□□□ 0.62
C9orf3-204ENST00000424143 TBC1D9Q6ZT07 1266 aa18.93■□□□□ 0.62
C9orf3-204ENST00000424143 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
C9orf3-204ENST00000424143 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
C9orf3-204ENST00000424143 GOLGA6L22H0YM25 854 aa18.92■□□□□ 0.62
C9orf3-204ENST00000424143 RABEP1Q15276 862 aa18.92■□□□□ 0.62
C9orf3-204ENST00000424143 PANK2Q9BZ23 570 aa18.92■□□□□ 0.62
C9orf3-204ENST00000424143 MINK1Q8N4C8 1332 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-204ENST00000424143 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
C9orf3-204ENST00000424143 DCTPP1Q9H773 170 aa18.91■□□□□ 0.62
C9orf3-204ENST00000424143 ESPNB1AK53 854 aa18.9■□□□□ 0.62
C9orf3-204ENST00000424143 IL13P35225 146 aa18.9■□□□□ 0.62
C9orf3-204ENST00000424143 SIRT2Q8IXJ6 389 aa18.9■□□□□ 0.62
C9orf3-204ENST00000424143 STK26Q9P289 416 aa18.9■□□□□ 0.62
C9orf3-204ENST00000424143 PPP1R9BQ96SB3 815 aa18.89■□□□□ 0.62
C9orf3-204ENST00000424143 CABP1Q9NZU7 370 aa18.89■□□□□ 0.62
C9orf3-204ENST00000424143 SETD1AO15047 1707 aaKnown RBP18.89■□□□□ 0.61
C9orf3-204ENST00000424143 NUCB2P80303 420 aa18.89■□□□□ 0.61
C9orf3-204ENST00000424143 KLHL40Q2TBA0 621 aa18.89■□□□□ 0.61
C9orf3-204ENST00000424143 INTS3Q68E01 1043 aaKnown RBP18.89■□□□□ 0.61
C9orf3-204ENST00000424143 SIRT1Q96EB6 747 aa18.89■□□□□ 0.61
C9orf3-204ENST00000424143 CCDC173Q0VFZ6 552 aa18.87■□□□□ 0.61
C9orf3-204ENST00000424143 SAFB2Q14151 953 aaKnown RBP eCLIP18.87■□□□□ 0.61
C9orf3-204ENST00000424143 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
C9orf3-204ENST00000424143 CWC22Q9HCG8 908 aaKnown RBP18.87■□□□□ 0.61
C9orf3-204ENST00000424143 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
C9orf3-204ENST00000424143 RPAP2Q8IXW5 612 aaPredicted RBP18.86■□□□□ 0.61
C9orf3-204ENST00000424143 MBIPQ9NS73 344 aa18.86■□□□□ 0.61
C9orf3-204ENST00000424143 TWISTNBQ3B726 338 aaPredicted RBP18.85■□□□□ 0.61
C9orf3-204ENST00000424143 PLEKHM2Q8IWE5 1019 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 PHACTR3Q96KR7 559 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 RIMBP3CA6NJZ7 1639 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 RIMBP3BA6NNM3 1639 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 RIMBP3Q9UFD9 1639 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 ZNF445P59923 1031 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 HS1BP3Q53T59 392 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 NRKQ7Z2Y5 1582 aa18.85■□□□□ 0.61
C9orf3-204ENST00000424143 KIAA0232Q92628 1395 aa18.84■□□□□ 0.61
C9orf3-204ENST00000424143 AGLP35573 1532 aa18.84■□□□□ 0.61
C9orf3-204ENST00000424143 CYP2E1P05181 493 aaPredicted RBP18.84■□□□□ 0.61
C9orf3-204ENST00000424143 HSP90AA1P07900 732 aaKnown RBP18.84■□□□□ 0.61
C9orf3-204ENST00000424143 TTC22Q5TAA0 569 aa18.84■□□□□ 0.61
C9orf3-204ENST00000424143 ANKRD44Q8N8A2 993 aa18.84■□□□□ 0.61
C9orf3-204ENST00000424143 RIMS2Q9UQ26 1411 aa18.84■□□□□ 0.61
C9orf3-204ENST00000424143 GAS2L3Q86XJ1 694 aa18.83■□□□□ 0.61
C9orf3-204ENST00000424143 TRIM44Q96DX7 344 aaPredicted RBP18.83■□□□□ 0.61
C9orf3-204ENST00000424143 KNDC1Q76NI1 1749 aa18.82■□□□□ 0.6
C9orf3-204ENST00000424143 RAPGEF3O95398 923 aa18.82■□□□□ 0.6
C9orf3-204ENST00000424143 BAG4O95429 457 aaKnown RBP18.82■□□□□ 0.6
C9orf3-204ENST00000424143 TSPYL6Q8N831 410 aa18.82■□□□□ 0.6
C9orf3-204ENST00000424143 RRP9O43818 475 aaKnown RBP18.82■□□□□ 0.6
C9orf3-204ENST00000424143 CD2BP2O95400 341 aaKnown RBP18.82■□□□□ 0.6
C9orf3-204ENST00000424143 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
C9orf3-204ENST00000424143 USP26Q9BXU7 913 aa18.82■□□□□ 0.6
C9orf3-204ENST00000424143 TERF1P54274 439 aa18.81■□□□□ 0.6
C9orf3-204ENST00000424143 AKAP12Q02952 1782 aa18.81■□□□□ 0.6
C9orf3-204ENST00000424143 SPATA31D1Q6ZQQ2 1576 aa18.81■□□□□ 0.6
C9orf3-204ENST00000424143 ATP10DQ9P241 1426 aa18.8■□□□□ 0.6
C9orf3-204ENST00000424143 PTPRCP08575 1304 aa18.8■□□□□ 0.6
C9orf3-204ENST00000424143 TPM2P07951 284 aa18.8■□□□□ 0.6
C9orf3-204ENST00000424143 GSPT1P15170 499 aaKnown RBP18.8■□□□□ 0.6
C9orf3-204ENST00000424143 A2ML1A8K2U0 1454 aa18.79■□□□□ 0.6
C9orf3-204ENST00000424143 TECPR2O15040 1411 aa18.79■□□□□ 0.6
C9orf3-204ENST00000424143 C3P01024 1663 aa18.79■□□□□ 0.6
C9orf3-204ENST00000424143 SSFA2P28290 1259 aa18.78■□□□□ 0.6
C9orf3-204ENST00000424143 CASC1Q6TDU7 716 aa18.78■□□□□ 0.6
C9orf3-204ENST00000424143 C8orf58Q8NAV2 365 aa18.78■□□□□ 0.6
C9orf3-204ENST00000424143 NAP1L5Q96NT1 182 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-204ENST00000424143 RGS12O14924 1447 aa18.78■□□□□ 0.6
C9orf3-204ENST00000424143 WASLO00401 505 aaPredicted RBP18.78■□□□□ 0.6
C9orf3-204ENST00000424143 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
C9orf3-204ENST00000424143 ANP32BQ92688 251 aaKnown RBP18.78■□□□□ 0.6
C9orf3-204ENST00000424143 OSBPL3Q9H4L5 887 aa18.78■□□□□ 0.6
C9orf3-204ENST00000424143 GLIPR1L2Q4G1C9 344 aa18.77■□□□□ 0.6
C9orf3-204ENST00000424143 CHL1O00533 1208 aa18.76■□□□□ 0.59
C9orf3-204ENST00000424143 C1orf115Q9H7X2 142 aa18.76■□□□□ 0.59
C9orf3-204ENST00000424143 REC8O95072 547 aa18.75■□□□□ 0.59
C9orf3-204ENST00000424143 HMOX1P09601 288 aa18.75■□□□□ 0.59
C9orf3-204ENST00000424143 NASPP49321 788 aaPredicted RBP18.75■□□□□ 0.59
C9orf3-204ENST00000424143 ZSCAN30Q86W11 494 aa18.75■□□□□ 0.59
C9orf3-204ENST00000424143 DDX49Q9Y6V7 483 aaKnown RBP18.75■□□□□ 0.59
C9orf3-204ENST00000424143 ERBB4Q15303 1308 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms