RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PUS7Q96PZ0 661 aaKnown RBP21.42■■□□□ 1.02
USB1-202ENST00000423271 THRAP3Q9Y2W1 955 aaKnown RBP21.42■■□□□ 1.02
USB1-202ENST00000423271 EDC4Q6P2E9 1401 aaKnown RBP21.41■■□□□ 1.02
USB1-202ENST00000423271 USP47Q96K76 1375 aa21.41■■□□□ 1.02
USB1-202ENST00000423271 BAG6P46379 1132 aa21.41■■□□□ 1.02
USB1-202ENST00000423271 WNK3Q9BYP7 1800 aa21.39■■□□□ 1.02
USB1-202ENST00000423271 WDR17Q8IZU2 1322 aa21.39■■□□□ 1.01
USB1-202ENST00000423271 PDE3BQ13370 1112 aa21.39■■□□□ 1.01
USB1-202ENST00000423271 FAM196AQ6ZSG2 479 aa21.39■■□□□ 1.01
USB1-202ENST00000423271 TOM1L2Q6ZVM7 507 aa21.39■■□□□ 1.01
USB1-202ENST00000423271 TERF2IPQ9NYB0 399 aa21.39■■□□□ 1.01
USB1-202ENST00000423271 LRRC37A3O60309 1634 aa21.39■■□□□ 1.01
USB1-202ENST00000423271 EN1Q05925 392 aaPredicted RBP21.38■■□□□ 1.01
USB1-202ENST00000423271 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
USB1-202ENST00000423271 TRIM37O94972 964 aa21.37■■□□□ 1.01
USB1-202ENST00000423271 ABCC6O95255 1503 aa21.37■■□□□ 1.01
USB1-202ENST00000423271 OVOS2A0A0J9YW53 1432 aa21.37■■□□□ 1.01
USB1-202ENST00000423271 OVOS2Q6IE36 1432 aa21.37■■□□□ 1.01
USB1-202ENST00000423271 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
USB1-202ENST00000423271 LTN1O94822 1766 aa21.36■■□□□ 1.01
USB1-202ENST00000423271 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
USB1-202ENST00000423271 CSB-PGBD3P0DP91 1061 aa21.34■■□□□ 1.01
USB1-202ENST00000423271 PEAK1Q9H792 1746 aa21.34■■□□□ 1.01
USB1-202ENST00000423271 SLC24A1O60721 1099 aa21.32■■□□□ 1
USB1-202ENST00000423271 TMF1P82094 1093 aa21.31■■□□□ 1
USB1-202ENST00000423271 EZH2Q15910 746 aaKnown RBP21.31■■□□□ 1
USB1-202ENST00000423271 CARD10Q9BWT7 1032 aa21.31■■□□□ 1
USB1-202ENST00000423271 TIMELESSQ9UNS1 1208 aa21.31■■□□□ 1
USB1-202ENST00000423271 APBA3O96018 575 aa21.3■■□□□ 1
USB1-202ENST00000423271 DDB1Q16531 1140 aa21.3■■□□□ 1
USB1-202ENST00000423271 ANKRD36BQ8N2N9 1353 aa21.3■■□□□ 1
USB1-202ENST00000423271 OVOS2A0A0G2JMS6 1433 aa21.29■■□□□ 1
USB1-202ENST00000423271 PSDA5PKW4 1024 aaPredicted RBP21.29■■□□□ 1
USB1-202ENST00000423271 CCER1Q8TC90 406 aaPredicted RBP21.29■■□□□ 1
USB1-202ENST00000423271 CAMKK2Q96RR4 588 aa21.29■■□□□ 1
USB1-202ENST00000423271 ERBB3P21860 1342 aa21.29■■□□□ 1
USB1-202ENST00000423271 CCDC7Q96M83 1385 aa21.27■■□□□ 1
USB1-202ENST00000423271 CDCA7Q9BWT1 371 aaPredicted RBP21.27■■□□□ 1
USB1-202ENST00000423271 RREB1Q92766 1687 aa21.27■■□□□ 1
USB1-202ENST00000423271 SBF2Q86WG5 1849 aa21.27■□□□□ 0.99
USB1-202ENST00000423271 MYOM1P52179 1685 aa21.25■□□□□ 0.99
USB1-202ENST00000423271 MARCH10Q8NA82 808 aaPredicted RBP21.25■□□□□ 0.99
USB1-202ENST00000423271 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
USB1-202ENST00000423271 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
USB1-202ENST00000423271 COG3Q96JB2 828 aa21.24■□□□□ 0.99
USB1-202ENST00000423271 PARD3Q8TEW0 1356 aa21.23■□□□□ 0.99
USB1-202ENST00000423271 FBLN1P23142 703 aa21.23■□□□□ 0.99
USB1-202ENST00000423271 NLRP2Q9NX02 1062 aa21.23■□□□□ 0.99
USB1-202ENST00000423271 TNS2Q63HR2 1409 aa21.22■□□□□ 0.99
USB1-202ENST00000423271 R3HDM1Q15032 1099 aaKnown RBP21.22■□□□□ 0.99
USB1-202ENST00000423271 C11orf95C9JLR9 678 aaPredicted RBP21.21■□□□□ 0.99
USB1-202ENST00000423271 CDCA8Q53HL2 280 aa21.21■□□□□ 0.99
USB1-202ENST00000423271 PTF1AQ7RTS3 328 aa21.21■□□□□ 0.99
USB1-202ENST00000423271 IP6K1Q92551 441 aa21.21■□□□□ 0.99
USB1-202ENST00000423271 MAP3K19Q56UN5 1328 aa21.21■□□□□ 0.99
USB1-202ENST00000423271 LRP5O75197 1615 aa21.2■□□□□ 0.98
USB1-202ENST00000423271 GGNBP2Q9H3C7 697 aa21.2■□□□□ 0.98
USB1-202ENST00000423271 KIF20BQ96Q89 1820 aa21.2■□□□□ 0.98
USB1-202ENST00000423271 EXOC5O00471 708 aa21.19■□□□□ 0.98
USB1-202ENST00000423271 FYB1O15117 783 aa21.19■□□□□ 0.98
USB1-202ENST00000423271 BCL9O00512 1426 aa21.19■□□□□ 0.98
USB1-202ENST00000423271 LTV1Q96GA3 475 aaPredicted RBP21.18■□□□□ 0.98
USB1-202ENST00000423271 FAM208AQ9UK61 1670 aaKnown RBP21.18■□□□□ 0.98
USB1-202ENST00000423271 HOXC9P31274 260 aa21.17■□□□□ 0.98
USB1-202ENST00000423271 RGPD3A6NKT7 1758 aaPredicted RBP21.17■□□□□ 0.98
USB1-202ENST00000423271 RGPD4Q7Z3J3 1758 aa21.17■□□□□ 0.98
USB1-202ENST00000423271 IL2RBP14784 551 aa21.16■□□□□ 0.98
USB1-202ENST00000423271 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
USB1-202ENST00000423271 NSD3Q9BZ95 1437 aa21.15■□□□□ 0.98
USB1-202ENST00000423271 AMPHP49418 695 aa21.15■□□□□ 0.98
USB1-202ENST00000423271 RRS1Q15050 365 aaKnown RBP21.15■□□□□ 0.98
USB1-202ENST00000423271 CARD14Q9BXL6 1004 aa21.15■□□□□ 0.98
USB1-202ENST00000423271 RGPD2P0DJD1 1756 aa21.15■□□□□ 0.98
USB1-202ENST00000423271 RTL1A6NKG5 1358 aa21.13■□□□□ 0.97
USB1-202ENST00000423271 NHSQ6T4R5 1651 aa21.12■□□□□ 0.97
USB1-202ENST00000423271 PLSCR1O15162 318 aa21.11■□□□□ 0.97
USB1-202ENST00000423271 KCNQ2O43526 872 aa21.1■□□□□ 0.97
USB1-202ENST00000423271 HSPA5P11021 654 aaKnown RBP21.1■□□□□ 0.97
USB1-202ENST00000423271 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
USB1-202ENST00000423271 NBPF14Q5TI25 921 aa21.09■□□□□ 0.97
USB1-202ENST00000423271 ACSBG1Q96GR2 724 aa21.09■□□□□ 0.97
USB1-202ENST00000423271 EIF4G2P78344 907 aaKnown RBP eCLIP21.08■□□□□ 0.97
USB1-202ENST00000423271 PROM2Q8N271 834 aa21.07■□□□□ 0.96
USB1-202ENST00000423271 ANO8Q9HCE9 1232 aaPredicted RBP21.07■□□□□ 0.96
USB1-202ENST00000423271 MEGF6O75095 1541 aa21.07■□□□□ 0.96
USB1-202ENST00000423271 SHANK3Q9BYB0 1731 aa21.06■□□□□ 0.96
USB1-202ENST00000423271 KAT6BQ8WYB5 2073 aa21.05■□□□□ 0.96
USB1-202ENST00000423271 USHBP1Q8N6Y0 703 aa21.05■□□□□ 0.96
USB1-202ENST00000423271 BTAF1O14981 1849 aa21.05■□□□□ 0.96
USB1-202ENST00000423271 HSP90AB2PQ58FF8 381 aa21.04■□□□□ 0.96
USB1-202ENST00000423271 NBPF6Q5VWK0 638 aa21.04■□□□□ 0.96
USB1-202ENST00000423271 DDX54Q8TDD1 881 aaKnown RBP21.04■□□□□ 0.96
USB1-202ENST00000423271 NBPF4Q96M43 638 aa21.04■□□□□ 0.96
USB1-202ENST00000423271 EMILIN1Q9Y6C2 1016 aa21.04■□□□□ 0.96
USB1-202ENST00000423271 FLT4P35916 1363 aa21.04■□□□□ 0.96
USB1-202ENST00000423271 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
USB1-202ENST00000423271 INSRP06213 1382 aa21.03■□□□□ 0.96
USB1-202ENST00000423271 TXNRD1Q16881 649 aa21.03■□□□□ 0.96
USB1-202ENST00000423271 ANKRD26Q9UPS8 1709 aa21.02■□□□□ 0.96
USB1-202ENST00000423271 CGNL1Q0VF96 1302 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms