RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 NSD3Q9BZ95 1437 aa25.79■■□□□ 1.72
MCF2L-214ENST00000423251 SLIT3O75094 1523 aa25.78■■□□□ 1.72
MCF2L-214ENST00000423251 TNS1Q9HBL0 1735 aaKnown RBP25.78■■□□□ 1.72
MCF2L-214ENST00000423251 COG3Q96JB2 828 aa25.78■■□□□ 1.72
MCF2L-214ENST00000423251 CPDO75976 1380 aa25.78■■□□□ 1.72
MCF2L-214ENST00000423251 BAG6P46379 1132 aa25.77■■□□□ 1.72
MCF2L-214ENST00000423251 STRN4Q9NRL3 753 aa25.77■■□□□ 1.72
MCF2L-214ENST00000423251 CGNL1Q0VF96 1302 aa25.76■■□□□ 1.71
MCF2L-214ENST00000423251 USP54Q70EL1 1684 aa25.75■■□□□ 1.71
MCF2L-214ENST00000423251 OVOS2A0A0J9YW53 1432 aa25.75■■□□□ 1.71
MCF2L-214ENST00000423251 OVOS2Q6IE36 1432 aa25.75■■□□□ 1.71
MCF2L-214ENST00000423251 SPATA31A1Q5TZJ5 1347 aa25.75■■□□□ 1.71
MCF2L-214ENST00000423251 GGNBP2Q9H3C7 697 aa25.74■■□□□ 1.71
MCF2L-214ENST00000423251 LRP5O75197 1615 aa25.74■■□□□ 1.71
MCF2L-214ENST00000423251 LMO7Q8WWI1 1683 aa25.73■■□□□ 1.71
MCF2L-214ENST00000423251 ARHGEF25Q86VW2 580 aa25.72■■□□□ 1.71
MCF2L-214ENST00000423251 PSDA5PKW4 1024 aaPredicted RBP25.71■■□□□ 1.71
MCF2L-214ENST00000423251 SOX12O15370 315 aa25.71■■□□□ 1.71
MCF2L-214ENST00000423251 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
MCF2L-214ENST00000423251 CAMTA1Q9Y6Y1 1673 aa25.71■■□□□ 1.71
MCF2L-214ENST00000423251 EN1Q05925 392 aaPredicted RBP25.7■■□□□ 1.7
MCF2L-214ENST00000423251 USP35Q9P2H5 1018 aa25.7■■□□□ 1.7
MCF2L-214ENST00000423251 PER1O15534 1290 aaPredicted RBP25.69■■□□□ 1.7
MCF2L-214ENST00000423251 AATKQ6ZMQ8 1374 aa25.69■■□□□ 1.7
MCF2L-214ENST00000423251 NFAT5O94916 1531 aa25.68■■□□□ 1.7
MCF2L-214ENST00000423251 DISP2A7MBM2 1401 aa25.68■■□□□ 1.7
MCF2L-214ENST00000423251 EVA1CP58658 441 aa25.66■■□□□ 1.7
MCF2L-214ENST00000423251 KIF20BQ96Q89 1820 aa25.65■■□□□ 1.7
MCF2L-214ENST00000423251 ZBTB7CA1YPR0 619 aa25.65■■□□□ 1.7
MCF2L-214ENST00000423251 NSD2O96028 1365 aa25.65■■□□□ 1.7
MCF2L-214ENST00000423251 LARP1Q6PKG0 1096 aaKnown RBP25.64■■□□□ 1.7
MCF2L-214ENST00000423251 AMER1Q5JTC6 1135 aaPredicted RBP25.63■■□□□ 1.69
MCF2L-214ENST00000423251 TRIM37O94972 964 aa25.62■■□□□ 1.69
MCF2L-214ENST00000423251 COL5A2P05997 1499 aaPredicted RBP25.61■■□□□ 1.69
MCF2L-214ENST00000423251 BARGINQ6ZT62 677 aa25.61■■□□□ 1.69
MCF2L-214ENST00000423251 AXIN2Q9Y2T1 843 aa25.61■■□□□ 1.69
MCF2L-214ENST00000423251 FBLN1P23142 703 aa25.6■■□□□ 1.69
MCF2L-214ENST00000423251 EZH2Q15910 746 aaKnown RBP25.6■■□□□ 1.69
MCF2L-214ENST00000423251 FAM196AQ6ZSG2 479 aa25.6■■□□□ 1.69
MCF2L-214ENST00000423251 COL18A1P39060 1754 aa25.59■■□□□ 1.69
MCF2L-214ENST00000423251 TCP11L2Q8N4U5 519 aa25.59■■□□□ 1.69
MCF2L-214ENST00000423251 PARP4Q9UKK3 1724 aaKnown RBP25.59■■□□□ 1.69
MCF2L-214ENST00000423251 R3HDM1Q15032 1099 aaKnown RBP25.58■■□□□ 1.69
MCF2L-214ENST00000423251 IP6K1Q92551 441 aa25.58■■□□□ 1.69
MCF2L-214ENST00000423251 MAP3K19Q56UN5 1328 aa25.58■■□□□ 1.69
MCF2L-214ENST00000423251 ABCC6O95255 1503 aa25.58■■□□□ 1.68
MCF2L-214ENST00000423251 NPC1L1Q9UHC9 1359 aa25.57■■□□□ 1.68
MCF2L-214ENST00000423251 RREB1Q92766 1687 aa25.57■■□□□ 1.68
MCF2L-214ENST00000423251 PDE3BQ13370 1112 aa25.56■■□□□ 1.68
MCF2L-214ENST00000423251 RRS1Q15050 365 aaKnown RBP25.56■■□□□ 1.68
MCF2L-214ENST00000423251 MORC1Q86VD1 984 aa25.56■■□□□ 1.68
MCF2L-214ENST00000423251 AMPHP49418 695 aa25.55■■□□□ 1.68
MCF2L-214ENST00000423251 CAMKK2Q96RR4 588 aa25.55■■□□□ 1.68
MCF2L-214ENST00000423251 NUP188Q5SRE5 1749 aa25.54■■□□□ 1.68
MCF2L-214ENST00000423251 APBA3O96018 575 aa25.54■■□□□ 1.68
MCF2L-214ENST00000423251 ANKRD26Q9UPS8 1709 aa25.54■■□□□ 1.68
MCF2L-214ENST00000423251 LTN1O94822 1766 aa25.54■■□□□ 1.68
MCF2L-214ENST00000423251 HOXC9P31274 260 aa25.53■■□□□ 1.68
MCF2L-214ENST00000423251 KIF24Q5T7B8 1368 aa25.53■■□□□ 1.68
MCF2L-214ENST00000423251 CRB1P82279 1406 aa25.53■■□□□ 1.68
MCF2L-214ENST00000423251 LRRC37A3O60309 1634 aa25.52■■□□□ 1.68
MCF2L-214ENST00000423251 WNK3Q9BYP7 1800 aa25.52■■□□□ 1.68
MCF2L-214ENST00000423251 ZNF316A6NFI3 1004 aaPredicted RBP25.52■■□□□ 1.68
MCF2L-214ENST00000423251 THRAP3Q9Y2W1 955 aaKnown RBP25.52■■□□□ 1.68
MCF2L-214ENST00000423251 TNNT2P45379 298 aaPredicted RBP25.51■■□□□ 1.67
MCF2L-214ENST00000423251 DDX10Q13206 875 aaKnown RBP25.51■■□□□ 1.67
MCF2L-214ENST00000423251 CC2D1BQ5T0F9 858 aaKnown RBP25.51■■□□□ 1.67
MCF2L-214ENST00000423251 WDR17Q8IZU2 1322 aa25.51■■□□□ 1.67
MCF2L-214ENST00000423251 RTL1A6NKG5 1358 aa25.51■■□□□ 1.67
MCF2L-214ENST00000423251 PARD3Q8TEW0 1356 aa25.51■■□□□ 1.67
MCF2L-214ENST00000423251 POLKQ9UBT6 870 aa25.5■■□□□ 1.67
MCF2L-214ENST00000423251 PEAK1Q9H792 1746 aa25.49■■□□□ 1.67
MCF2L-214ENST00000423251 CSB-PGBD3P0DP91 1061 aa25.48■■□□□ 1.67
MCF2L-214ENST00000423251 TOM1L2Q6ZVM7 507 aa25.48■■□□□ 1.67
MCF2L-214ENST00000423251 ANKRD24Q8TF21 1146 aa25.48■■□□□ 1.67
MCF2L-214ENST00000423251 EMILIN1Q9Y6C2 1016 aa25.48■■□□□ 1.67
MCF2L-214ENST00000423251 RGPD5Q99666 1765 aa25.48■■□□□ 1.67
MCF2L-214ENST00000423251 FLT4P35916 1363 aa25.47■■□□□ 1.67
MCF2L-214ENST00000423251 ERBB3P21860 1342 aa25.47■■□□□ 1.67
MCF2L-214ENST00000423251 CARD10Q9BWT7 1032 aa25.46■■□□□ 1.67
MCF2L-214ENST00000423251 MAP2P11137 1827 aaKnown RBP25.45■■□□□ 1.66
MCF2L-214ENST00000423251 SBF2Q86WG5 1849 aa25.45■■□□□ 1.66
MCF2L-214ENST00000423251 PPM1GO15355 546 aaPredicted RBP25.45■■□□□ 1.66
MCF2L-214ENST00000423251 HSP90AB2PQ58FF8 381 aa25.45■■□□□ 1.66
MCF2L-214ENST00000423251 OVOS2A0A0G2JMS6 1433 aa25.45■■□□□ 1.66
MCF2L-214ENST00000423251 INSRP06213 1382 aa25.44■■□□□ 1.66
MCF2L-214ENST00000423251 LTV1Q96GA3 475 aaPredicted RBP25.43■■□□□ 1.66
MCF2L-214ENST00000423251 CNGB1Q14028 1251 aaPredicted RBP25.41■■□□□ 1.66
MCF2L-214ENST00000423251 NLRP2Q9NX02 1062 aa25.41■■□□□ 1.66
MCF2L-214ENST00000423251 SMG6Q86US8 1419 aaKnown RBP25.39■■□□□ 1.66
MCF2L-214ENST00000423251 RGPD3A6NKT7 1758 aaPredicted RBP25.39■■□□□ 1.66
MCF2L-214ENST00000423251 RGPD4Q7Z3J3 1758 aa25.39■■□□□ 1.66
MCF2L-214ENST00000423251 DDB1Q16531 1140 aa25.39■■□□□ 1.66
MCF2L-214ENST00000423251 CDCA7Q9BWT1 371 aaPredicted RBP25.37■■□□□ 1.65
MCF2L-214ENST00000423251 MTHFSP49914 203 aa25.36■■□□□ 1.65
MCF2L-214ENST00000423251 NBPF14Q5TI25 921 aa25.35■■□□□ 1.65
MCF2L-214ENST00000423251 NBPF6Q5VWK0 638 aa25.34■■□□□ 1.65
MCF2L-214ENST00000423251 NBPF4Q96M43 638 aa25.34■■□□□ 1.65
MCF2L-214ENST00000423251 FAM208AQ9UK61 1670 aaKnown RBP25.32■■□□□ 1.64
MCF2L-214ENST00000423251 PTF1AQ7RTS3 328 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms