RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 NME9Q86XW9 330 aa35.92■■■■□ 3.34
SMDT1-202ENST00000422252 A0A1W2PP64 1363 aa35.91■■■■□ 3.34
SMDT1-202ENST00000422252 TOM1L2Q6ZVM7 507 aa35.91■■■■□ 3.34
SMDT1-202ENST00000422252 WDR17Q8IZU2 1322 aa35.9■■■■□ 3.34
SMDT1-202ENST00000422252 USP54Q70EL1 1684 aa35.9■■■■□ 3.34
SMDT1-202ENST00000422252 NINLQ9Y2I6 1382 aa35.89■■■■□ 3.34
SMDT1-202ENST00000422252 PCGF6Q9BYE7 350 aa35.89■■■■□ 3.34
SMDT1-202ENST00000422252 PARP4Q9UKK3 1724 aaKnown RBP35.88■■■■□ 3.34
SMDT1-202ENST00000422252 CLSPNQ9HAW4 1339 aa35.88■■■■□ 3.33
SMDT1-202ENST00000422252 TIMELESSQ9UNS1 1208 aa35.88■■■■□ 3.33
SMDT1-202ENST00000422252 USP47Q96K76 1375 aa35.88■■■■□ 3.33
SMDT1-202ENST00000422252 TNS1Q9HBL0 1735 aaKnown RBP35.86■■■■□ 3.33
SMDT1-202ENST00000422252 DISP2A7MBM2 1401 aa35.86■■■■□ 3.33
SMDT1-202ENST00000422252 TRIM37O94972 964 aa35.86■■■■□ 3.33
SMDT1-202ENST00000422252 EN1Q05925 392 aaPredicted RBP35.86■■■■□ 3.33
SMDT1-202ENST00000422252 ABCC6O95255 1503 aa35.85■■■■□ 3.33
SMDT1-202ENST00000422252 RGPD5Q99666 1765 aa35.83■■■■□ 3.33
SMDT1-202ENST00000422252 CSB-PGBD3P0DP91 1061 aa35.82■■■■□ 3.32
SMDT1-202ENST00000422252 TMF1P82094 1093 aa35.8■■■■□ 3.32
SMDT1-202ENST00000422252 CARD10Q9BWT7 1032 aa35.79■■■■□ 3.32
SMDT1-202ENST00000422252 DDB1Q16531 1140 aa35.78■■■■□ 3.32
SMDT1-202ENST00000422252 OVOS2A0A0J9YW53 1432 aa35.77■■■■□ 3.32
SMDT1-202ENST00000422252 OVOS2Q6IE36 1432 aa35.77■■■■□ 3.32
SMDT1-202ENST00000422252 LRRC37A3O60309 1634 aa35.77■■■■□ 3.32
SMDT1-202ENST00000422252 CDCA7Q9BWT1 371 aaPredicted RBP35.77■■■■□ 3.32
SMDT1-202ENST00000422252 C11orf95C9JLR9 678 aaPredicted RBP35.76■■■■□ 3.32
SMDT1-202ENST00000422252 WNK3Q9BYP7 1800 aa35.76■■■■□ 3.31
SMDT1-202ENST00000422252 SRCAPQ6ZRS2 3230 aa35.76■■■■□ 3.31
SMDT1-202ENST00000422252 APBA3O96018 575 aa35.75■■■■□ 3.31
SMDT1-202ENST00000422252 EZH2Q15910 746 aaKnown RBP35.75■■■■□ 3.31
SMDT1-202ENST00000422252 CAMKK2Q96RR4 588 aa35.73■■■■□ 3.31
SMDT1-202ENST00000422252 LTN1O94822 1766 aa35.73■■■■□ 3.31
SMDT1-202ENST00000422252 ANKRD36BQ8N2N9 1353 aa35.73■■■■□ 3.31
SMDT1-202ENST00000422252 OVOS2A0A0G2JMS6 1433 aa35.73■■■■□ 3.31
SMDT1-202ENST00000422252 CCDC7Q96M83 1385 aa35.72■■■■□ 3.31
SMDT1-202ENST00000422252 ERBB3P21860 1342 aa35.7■■■■□ 3.31
SMDT1-202ENST00000422252 PARD3Q8TEW0 1356 aa35.7■■■■□ 3.31
SMDT1-202ENST00000422252 PEAK1Q9H792 1746 aa35.69■■■■□ 3.3
SMDT1-202ENST00000422252 CDCA8Q53HL2 280 aa35.69■■■■□ 3.3
SMDT1-202ENST00000422252 COG3Q96JB2 828 aa35.68■■■■□ 3.3
SMDT1-202ENST00000422252 PSDA5PKW4 1024 aaPredicted RBP35.67■■■■□ 3.3
SMDT1-202ENST00000422252 MARCH10Q8NA82 808 aaPredicted RBP35.64■■■■□ 3.3
SMDT1-202ENST00000422252 ANKRD24Q8TF21 1146 aa35.64■■■■□ 3.3
SMDT1-202ENST00000422252 NLRP2Q9NX02 1062 aa35.64■■■■□ 3.3
SMDT1-202ENST00000422252 EXOC5O00471 708 aa35.61■■■■□ 3.29
SMDT1-202ENST00000422252 IP6K1Q92551 441 aa35.61■■■■□ 3.29
SMDT1-202ENST00000422252 BCL9O00512 1426 aa35.59■■■■□ 3.29
SMDT1-202ENST00000422252 RREB1Q92766 1687 aa35.59■■■■□ 3.29
SMDT1-202ENST00000422252 SBF2Q86WG5 1849 aa35.58■■■■□ 3.29
SMDT1-202ENST00000422252 R3HDM1Q15032 1099 aaKnown RBP35.58■■■■□ 3.29
SMDT1-202ENST00000422252 CCER1Q8TC90 406 aaPredicted RBP35.58■■■■□ 3.29
SMDT1-202ENST00000422252 TNS2Q63HR2 1409 aa35.57■■■■□ 3.28
SMDT1-202ENST00000422252 FYB1O15117 783 aa35.56■■■■□ 3.28
SMDT1-202ENST00000422252 BCL11BQ9C0K0 894 aaPredicted RBP35.55■■■■□ 3.28
SMDT1-202ENST00000422252 MAP3K19Q56UN5 1328 aa35.55■■■■□ 3.28
SMDT1-202ENST00000422252 IL2RBP14784 551 aa35.54■■■■□ 3.28
SMDT1-202ENST00000422252 GGNBP2Q9H3C7 697 aa35.53■■■■□ 3.28
SMDT1-202ENST00000422252 LRP5O75197 1615 aa35.53■■■■□ 3.28
SMDT1-202ENST00000422252 NUP188Q5SRE5 1749 aa35.52■■■■□ 3.28
SMDT1-202ENST00000422252 FBLN1P23142 703 aa35.52■■■■□ 3.28
SMDT1-202ENST00000422252 HOXC9P31274 260 aa35.51■■■■□ 3.28
SMDT1-202ENST00000422252 AMPHP49418 695 aa35.51■■■■□ 3.28
SMDT1-202ENST00000422252 MYOM1P52179 1685 aa35.5■■■■□ 3.27
SMDT1-202ENST00000422252 PLSCR1O15162 318 aa35.5■■■■□ 3.27
SMDT1-202ENST00000422252 PTF1AQ7RTS3 328 aa35.5■■■■□ 3.27
SMDT1-202ENST00000422252 LTV1Q96GA3 475 aaPredicted RBP35.5■■■■□ 3.27
SMDT1-202ENST00000422252 NBPF14Q5TI25 921 aa35.48■■■■□ 3.27
SMDT1-202ENST00000422252 FAM208AQ9UK61 1670 aaKnown RBP35.48■■■■□ 3.27
SMDT1-202ENST00000422252 RGPD3A6NKT7 1758 aaPredicted RBP35.47■■■■□ 3.27
SMDT1-202ENST00000422252 RGPD4Q7Z3J3 1758 aa35.47■■■■□ 3.27
SMDT1-202ENST00000422252 RTL1A6NKG5 1358 aa35.46■■■■□ 3.27
SMDT1-202ENST00000422252 RRS1Q15050 365 aaKnown RBP35.45■■■■□ 3.27
SMDT1-202ENST00000422252 CARD14Q9BXL6 1004 aa35.45■■■■□ 3.27
SMDT1-202ENST00000422252 KIF20BQ96Q89 1820 aa35.45■■■■□ 3.27
SMDT1-202ENST00000422252 NSD3Q9BZ95 1437 aa35.42■■■■□ 3.26
SMDT1-202ENST00000422252 EIF4G2P78344 907 aaKnown RBP eCLIP35.4■■■■□ 3.26
SMDT1-202ENST00000422252 KCNQ2O43526 872 aa35.37■■■■□ 3.25
SMDT1-202ENST00000422252 HSPA5P11021 654 aaKnown RBP35.36■■■■□ 3.25
SMDT1-202ENST00000422252 ACSBG1Q96GR2 724 aa35.36■■■■□ 3.25
SMDT1-202ENST00000422252 NHSQ6T4R5 1651 aa35.36■■■■□ 3.25
SMDT1-202ENST00000422252 POLR3GLQ9BT43 218 aa35.35■■■■□ 3.25
SMDT1-202ENST00000422252 PROM2Q8N271 834 aa35.34■■■■□ 3.25
SMDT1-202ENST00000422252 RGPD2P0DJD1 1756 aa35.33■■■■□ 3.25
SMDT1-202ENST00000422252 SMG6Q86US8 1419 aaKnown RBP35.32■■■■□ 3.25
SMDT1-202ENST00000422252 KIF24Q5T7B8 1368 aa35.32■■■■□ 3.24
SMDT1-202ENST00000422252 INSRP06213 1382 aa35.3■■■■□ 3.24
SMDT1-202ENST00000422252 FLT4P35916 1363 aa35.3■■■■□ 3.24
SMDT1-202ENST00000422252 TXNRD1Q16881 649 aa35.3■■■■□ 3.24
SMDT1-202ENST00000422252 NBPF6Q5VWK0 638 aa35.3■■■■□ 3.24
SMDT1-202ENST00000422252 DDX54Q8TDD1 881 aaKnown RBP35.3■■■■□ 3.24
SMDT1-202ENST00000422252 NBPF4Q96M43 638 aa35.3■■■■□ 3.24
SMDT1-202ENST00000422252 CGNL1Q0VF96 1302 aa35.3■■■■□ 3.24
SMDT1-202ENST00000422252 HSP90AB2PQ58FF8 381 aa35.29■■■■□ 3.24
SMDT1-202ENST00000422252 ANO8Q9HCE9 1232 aaPredicted RBP35.28■■■■□ 3.24
SMDT1-202ENST00000422252 MEGF6O75095 1541 aa35.27■■■■□ 3.24
SMDT1-202ENST00000422252 ZCRB1Q8TBF4 217 aaKnown RBP35.25■■■■□ 3.23
SMDT1-202ENST00000422252 EMILIN1Q9Y6C2 1016 aa35.25■■■■□ 3.23
SMDT1-202ENST00000422252 USHBP1Q8N6Y0 703 aa35.24■■■■□ 3.23
SMDT1-202ENST00000422252 BTAF1O14981 1849 aa35.21■■■■□ 3.23
SMDT1-202ENST00000422252 RAPGEF4Q8WZA2 1011 aa35.2■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms