RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 R3HDM1Q15032 1099 aaKnown RBP26.77■■□□□ 1.88
AC004540.1-203ENST00000421862 APBA3O96018 575 aa26.74■■□□□ 1.87
AC004540.1-203ENST00000421862 LTN1O94822 1766 aa26.74■■□□□ 1.87
AC004540.1-203ENST00000421862 TTC21BQ7Z4L5 1316 aa26.72■■□□□ 1.87
AC004540.1-203ENST00000421862 TTC21AQ8NDW8 1320 aa26.72■■□□□ 1.87
AC004540.1-203ENST00000421862 WDR17Q8IZU2 1322 aa26.71■■□□□ 1.87
AC004540.1-203ENST00000421862 C11orf95C9JLR9 678 aaPredicted RBP26.71■■□□□ 1.87
AC004540.1-203ENST00000421862 ZNF692Q9BU19 519 aaPredicted RBP26.71■■□□□ 1.87
AC004540.1-203ENST00000421862 CD163L1Q9NR16 1453 aa26.7■■□□□ 1.87
AC004540.1-203ENST00000421862 BCL9O00512 1426 aa26.69■■□□□ 1.86
AC004540.1-203ENST00000421862 ARHGEF25Q86VW2 580 aa26.68■■□□□ 1.86
AC004540.1-203ENST00000421862 KCNH5Q8NCM2 988 aa26.67■■□□□ 1.86
AC004540.1-203ENST00000421862 AXIN2Q9Y2T1 843 aa26.67■■□□□ 1.86
AC004540.1-203ENST00000421862 KTN1Q86UP2 1357 aaKnown RBP26.67■■□□□ 1.86
AC004540.1-203ENST00000421862 CASZ1Q86V15 1759 aa26.66■■□□□ 1.86
AC004540.1-203ENST00000421862 ZBTB7CA1YPR0 619 aa26.66■■□□□ 1.86
AC004540.1-203ENST00000421862 NEUROD1Q13562 356 aa26.66■■□□□ 1.86
AC004540.1-203ENST00000421862 USP31Q70CQ4 1352 aa26.64■■□□□ 1.86
AC004540.1-203ENST00000421862 TOM1L2Q6ZVM7 507 aa26.64■■□□□ 1.86
AC004540.1-203ENST00000421862 DDB1Q16531 1140 aa26.63■■□□□ 1.85
AC004540.1-203ENST00000421862 NHSQ6T4R5 1651 aa26.63■■□□□ 1.85
AC004540.1-203ENST00000421862 CDCA7Q9BWT1 371 aaPredicted RBP26.61■■□□□ 1.85
AC004540.1-203ENST00000421862 TNS2Q63HR2 1409 aa26.6■■□□□ 1.85
AC004540.1-203ENST00000421862 FAM208AQ9UK61 1670 aaKnown RBP26.6■■□□□ 1.85
AC004540.1-203ENST00000421862 CARD10Q9BWT7 1032 aa26.59■■□□□ 1.85
AC004540.1-203ENST00000421862 CCDC7Q96M83 1385 aa26.58■■□□□ 1.85
AC004540.1-203ENST00000421862 PLSCR1O15162 318 aa26.57■■□□□ 1.84
AC004540.1-203ENST00000421862 NBPF14Q5TI25 921 aa26.57■■□□□ 1.84
AC004540.1-203ENST00000421862 EDC4Q6P2E9 1401 aaKnown RBP26.56■■□□□ 1.84
AC004540.1-203ENST00000421862 MARCH10Q8NA82 808 aaPredicted RBP26.56■■□□□ 1.84
AC004540.1-203ENST00000421862 CARD11Q9BXL7 1154 aa26.55■■□□□ 1.84
AC004540.1-203ENST00000421862 SOX12O15370 315 aa26.54■■□□□ 1.84
AC004540.1-203ENST00000421862 BCL11BQ9C0K0 894 aaPredicted RBP26.54■■□□□ 1.84
AC004540.1-203ENST00000421862 ERBB3P21860 1342 aa26.53■■□□□ 1.84
AC004540.1-203ENST00000421862 PTF1AQ7RTS3 328 aa26.52■■□□□ 1.84
AC004540.1-203ENST00000421862 A0A1W2PP64 1363 aa26.51■■□□□ 1.83
AC004540.1-203ENST00000421862 TONSLQ96HA7 1378 aa26.51■■□□□ 1.83
AC004540.1-203ENST00000421862 BTAF1O14981 1849 aa26.51■■□□□ 1.83
AC004540.1-203ENST00000421862 PAPPAQ13219 1627 aa26.5■■□□□ 1.83
AC004540.1-203ENST00000421862 CSB-PGBD3P0DP91 1061 aa26.5■■□□□ 1.83
AC004540.1-203ENST00000421862 NME9Q86XW9 330 aa26.49■■□□□ 1.83
AC004540.1-203ENST00000421862 ANO8Q9HCE9 1232 aaPredicted RBP26.49■■□□□ 1.83
AC004540.1-203ENST00000421862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.48■■□□□ 1.83
AC004540.1-203ENST00000421862 PUS7Q96PZ0 661 aaKnown RBP26.48■■□□□ 1.83
AC004540.1-203ENST00000421862 NINLQ9Y2I6 1382 aa26.46■■□□□ 1.83
AC004540.1-203ENST00000421862 MYOM1P52179 1685 aa26.46■■□□□ 1.83
AC004540.1-203ENST00000421862 HDGFL2Q7Z4V5 671 aaPredicted RBP26.45■■□□□ 1.82
AC004540.1-203ENST00000421862 SPON1Q9HCB6 807 aa26.45■■□□□ 1.82
AC004540.1-203ENST00000421862 PROM2Q8N271 834 aa26.44■■□□□ 1.82
AC004540.1-203ENST00000421862 SLC12A5Q9H2X9 1139 aa26.44■■□□□ 1.82
AC004540.1-203ENST00000421862 SHANK3Q9BYB0 1731 aa26.44■■□□□ 1.82
AC004540.1-203ENST00000421862 EXOC5O00471 708 aa26.43■■□□□ 1.82
AC004540.1-203ENST00000421862 KCNQ2O43526 872 aa26.43■■□□□ 1.82
AC004540.1-203ENST00000421862 TMC1Q8TDI8 760 aa26.42■■□□□ 1.82
AC004540.1-203ENST00000421862 RGPD2P0DJD1 1756 aa26.42■■□□□ 1.82
AC004540.1-203ENST00000421862 TESK2Q96S53 571 aa26.41■■□□□ 1.82
AC004540.1-203ENST00000421862 TERF2IPQ9NYB0 399 aa26.41■■□□□ 1.82
AC004540.1-203ENST00000421862 QSER1Q2KHR3 1735 aa26.41■■□□□ 1.82
AC004540.1-203ENST00000421862 DOT1LQ8TEK3 1739 aa26.38■■□□□ 1.81
AC004540.1-203ENST00000421862 IL2RBP14784 551 aa26.37■■□□□ 1.81
AC004540.1-203ENST00000421862 TXNRD1Q16881 649 aa26.37■■□□□ 1.81
AC004540.1-203ENST00000421862 ANKRD24Q8TF21 1146 aa26.37■■□□□ 1.81
AC004540.1-203ENST00000421862 KIF20BQ96Q89 1820 aa26.37■■□□□ 1.81
AC004540.1-203ENST00000421862 NLRP2Q9NX02 1062 aa26.36■■□□□ 1.81
AC004540.1-203ENST00000421862 KAT6BQ8WYB5 2073 aa26.35■■□□□ 1.81
AC004540.1-203ENST00000421862 PDGFDQ9GZP0 370 aaPredicted RBP26.34■■□□□ 1.81
AC004540.1-203ENST00000421862 LY75O60449 1722 aa26.34■■□□□ 1.81
AC004540.1-203ENST00000421862 TUBGCP6Q96RT7 1819 aa26.33■■□□□ 1.81
AC004540.1-203ENST00000421862 PPP1R1BQ9UD71 204 aaPredicted RBP26.33■■□□□ 1.81
AC004540.1-203ENST00000421862 COL24A1Q17RW2 1714 aa26.33■■□□□ 1.81
AC004540.1-203ENST00000421862 ANKRD36BQ8N2N9 1353 aa26.33■■□□□ 1.8
AC004540.1-203ENST00000421862 ST20-MTHFSA0A0A6YYL1 179 aa26.31■■□□□ 1.8
AC004540.1-203ENST00000421862 IP6K1Q92551 441 aa26.31■■□□□ 1.8
AC004540.1-203ENST00000421862 SLC15A2Q16348 729 aa26.3■■□□□ 1.8
AC004540.1-203ENST00000421862 STK32BQ9NY57 414 aa26.3■■□□□ 1.8
AC004540.1-203ENST00000421862 SLC24A1O60721 1099 aa26.29■■□□□ 1.8
AC004540.1-203ENST00000421862 RTL1A6NKG5 1358 aa26.29■■□□□ 1.8
AC004540.1-203ENST00000421862 PTGER2P43116 358 aa26.28■■□□□ 1.8
AC004540.1-203ENST00000421862 ACSBG1Q96GR2 724 aa26.28■■□□□ 1.8
AC004540.1-203ENST00000421862 MAP3K19Q56UN5 1328 aa26.27■■□□□ 1.8
AC004540.1-203ENST00000421862 ZBTB7AO95365 584 aa26.25■■□□□ 1.79
AC004540.1-203ENST00000421862 MEGF6O75095 1541 aa26.24■■□□□ 1.79
AC004540.1-203ENST00000421862 USP47Q96K76 1375 aa26.24■■□□□ 1.79
AC004540.1-203ENST00000421862 COG3Q96JB2 828 aa26.24■■□□□ 1.79
AC004540.1-203ENST00000421862 ANKRD26Q9UPS8 1709 aa26.24■■□□□ 1.79
AC004540.1-203ENST00000421862 HOXC9P31274 260 aa26.23■■□□□ 1.79
AC004540.1-203ENST00000421862 SGIP1Q9BQI5 828 aa26.23■■□□□ 1.79
AC004540.1-203ENST00000421862 MTFR1LQ9H019 292 aa26.21■■□□□ 1.79
AC004540.1-203ENST00000421862 NSD2O96028 1365 aa26.2■■□□□ 1.78
AC004540.1-203ENST00000421862 CHD4Q14839 1912 aa26.2■■□□□ 1.78
AC004540.1-203ENST00000421862 YY1P25490 414 aa26.19■■□□□ 1.78
AC004540.1-203ENST00000421862 LRRC4BQ9NT99 713 aa26.18■■□□□ 1.78
AC004540.1-203ENST00000421862 PKD1L3Q7Z443 1732 aa26.17■■□□□ 1.78
AC004540.1-203ENST00000421862 ZNF827Q17R98 1081 aa26.17■■□□□ 1.78
AC004540.1-203ENST00000421862 LTV1Q96GA3 475 aaPredicted RBP26.17■■□□□ 1.78
AC004540.1-203ENST00000421862 ATF5Q9Y2D1 282 aaPredicted RBP26.17■■□□□ 1.78
AC004540.1-203ENST00000421862 UTRNP46939 3433 aa26.16■■□□□ 1.78
AC004540.1-203ENST00000421862 MAP3K5Q99683 1374 aa26.16■■□□□ 1.78
AC004540.1-203ENST00000421862 FBLN1P23142 703 aa26.15■■□□□ 1.78
AC004540.1-203ENST00000421862 AMPHP49418 695 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms