RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 PSME1Q06323 249 aa17.58■□□□□ 0.4
TMEM50B-201ENST00000420455 TSHZ2Q9NRE2 1034 aa17.58■□□□□ 0.4
TMEM50B-201ENST00000420455 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.4
TMEM50B-201ENST00000420455 TRIM35Q9UPQ4 493 aa17.58■□□□□ 0.4
TMEM50B-201ENST00000420455 PXDNQ92626 1479 aa17.57■□□□□ 0.4
TMEM50B-201ENST00000420455 ATF3P18847 181 aa17.57■□□□□ 0.4
TMEM50B-201ENST00000420455 DLG5Q8TDM6 1919 aa17.57■□□□□ 0.4
TMEM50B-201ENST00000420455 IL16Q14005 1332 aa17.56■□□□□ 0.4
TMEM50B-201ENST00000420455 KDRP35968 1356 aa17.56■□□□□ 0.4
TMEM50B-201ENST00000420455 MED1Q15648 1581 aaPredicted RBP17.55■□□□□ 0.4
TMEM50B-201ENST00000420455 ZNF335Q9H4Z2 1342 aaPredicted RBP17.55■□□□□ 0.4
TMEM50B-201ENST00000420455 HSP90AB2PQ58FF8 381 aa17.55■□□□□ 0.4
TMEM50B-201ENST00000420455 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
TMEM50B-201ENST00000420455 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
TMEM50B-201ENST00000420455 RRP1P56182 461 aaKnown RBP17.54■□□□□ 0.4
TMEM50B-201ENST00000420455 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
TMEM50B-201ENST00000420455 CAMTA1Q9Y6Y1 1673 aa17.54■□□□□ 0.4
TMEM50B-201ENST00000420455 FOXO3O43524 673 aa17.53■□□□□ 0.4
TMEM50B-201ENST00000420455 HOXC9P31274 260 aa17.53■□□□□ 0.4
TMEM50B-201ENST00000420455 KRT28Q7Z3Y7 464 aa17.53■□□□□ 0.4
TMEM50B-201ENST00000420455 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
TMEM50B-201ENST00000420455 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
TMEM50B-201ENST00000420455 NFE2L2Q16236 605 aa17.52■□□□□ 0.4
TMEM50B-201ENST00000420455 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
TMEM50B-201ENST00000420455 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
TMEM50B-201ENST00000420455 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.39
TMEM50B-201ENST00000420455 ABCC6O95255 1503 aa17.51■□□□□ 0.39
TMEM50B-201ENST00000420455 B4GALNT3Q6L9W6 998 aa17.51■□□□□ 0.39
TMEM50B-201ENST00000420455 NCAPD2Q15021 1401 aa17.51■□□□□ 0.39
TMEM50B-201ENST00000420455 HMOX1P09601 288 aa17.5■□□□□ 0.39
TMEM50B-201ENST00000420455 RIPK4P57078 832 aa17.5■□□□□ 0.39
TMEM50B-201ENST00000420455 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
TMEM50B-201ENST00000420455 IP6K1Q92551 441 aa17.49■□□□□ 0.39
TMEM50B-201ENST00000420455 NUTM2GQ5VZR2 741 aa17.49■□□□□ 0.39
TMEM50B-201ENST00000420455 TNS3Q68CZ2 1445 aa17.49■□□□□ 0.39
TMEM50B-201ENST00000420455 NPHP3Q7Z494 1330 aa17.49■□□□□ 0.39
TMEM50B-201ENST00000420455 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
TMEM50B-201ENST00000420455 NEUROD2Q15784 382 aa17.49■□□□□ 0.39
TMEM50B-201ENST00000420455 COL18A1P39060 1754 aa17.48■□□□□ 0.39
TMEM50B-201ENST00000420455 AMPHP49418 695 aa17.48■□□□□ 0.39
TMEM50B-201ENST00000420455 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
TMEM50B-201ENST00000420455 MYH16Q9H6N6 1097 aa17.47■□□□□ 0.39
TMEM50B-201ENST00000420455 ARHGEF25Q86VW2 580 aa17.47■□□□□ 0.39
TMEM50B-201ENST00000420455 BRINP3Q76B58 766 aa17.46■□□□□ 0.39
TMEM50B-201ENST00000420455 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.39
TMEM50B-201ENST00000420455 GCP02774 474 aa17.46■□□□□ 0.39
TMEM50B-201ENST00000420455 SULT6B1Q6IMI4 303 aa17.46■□□□□ 0.39
TMEM50B-201ENST00000420455 EYA1Q99502 592 aa17.46■□□□□ 0.39
TMEM50B-201ENST00000420455 CT47B1P0C2W7 299 aaPredicted RBP17.46■□□□□ 0.38
TMEM50B-201ENST00000420455 LRRC37A3O60309 1634 aa17.45■□□□□ 0.38
TMEM50B-201ENST00000420455 NEFMP07197 916 aa17.45■□□□□ 0.38
TMEM50B-201ENST00000420455 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
TMEM50B-201ENST00000420455 SOX12O15370 315 aa17.44■□□□□ 0.38
TMEM50B-201ENST00000420455 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
TMEM50B-201ENST00000420455 XPCQ01831 940 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-201ENST00000420455 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-201ENST00000420455 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
TMEM50B-201ENST00000420455 RGPD2P0DJD1 1756 aa17.44■□□□□ 0.38
TMEM50B-201ENST00000420455 LMOD3Q0VAK6 560 aa17.43■□□□□ 0.38
TMEM50B-201ENST00000420455 SLAIN2Q9P270 581 aa17.43■□□□□ 0.38
TMEM50B-201ENST00000420455 ABCA3Q99758 1704 aa17.43■□□□□ 0.38
TMEM50B-201ENST00000420455 PLIN1O60240 522 aa17.42■□□□□ 0.38
TMEM50B-201ENST00000420455 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
TMEM50B-201ENST00000420455 EXOC6Q8TAG9 804 aa17.41■□□□□ 0.38
TMEM50B-201ENST00000420455 RGPD5Q99666 1765 aa17.41■□□□□ 0.38
TMEM50B-201ENST00000420455 FAM208AQ9UK61 1670 aaKnown RBP17.41■□□□□ 0.38
TMEM50B-201ENST00000420455 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
TMEM50B-201ENST00000420455 CPDO75976 1380 aa17.4■□□□□ 0.38
TMEM50B-201ENST00000420455 RARSP54136 660 aaKnown RBP17.39■□□□□ 0.38
TMEM50B-201ENST00000420455 DDX17Q92841 729 aaKnown RBP17.39■□□□□ 0.38
TMEM50B-201ENST00000420455 CRB1P82279 1406 aa17.38■□□□□ 0.37
TMEM50B-201ENST00000420455 C20orf194Q5TEA3 1177 aa17.37■□□□□ 0.37
TMEM50B-201ENST00000420455 PLEKHG2Q9H7P9 1386 aa17.37■□□□□ 0.37
TMEM50B-201ENST00000420455 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
TMEM50B-201ENST00000420455 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.36■□□□□ 0.37
TMEM50B-201ENST00000420455 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
TMEM50B-201ENST00000420455 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
TMEM50B-201ENST00000420455 BCAR3O75815 825 aa17.36■□□□□ 0.37
TMEM50B-201ENST00000420455 GNAI1P63096 354 aa17.36■□□□□ 0.37
TMEM50B-201ENST00000420455 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
TMEM50B-201ENST00000420455 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
TMEM50B-201ENST00000420455 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
TMEM50B-201ENST00000420455 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
TMEM50B-201ENST00000420455 GAS2L2Q8NHY3 880 aa17.34■□□□□ 0.37
TMEM50B-201ENST00000420455 CCDC136Q96JN2 1154 aa17.34■□□□□ 0.37
TMEM50B-201ENST00000420455 AXIN2Q9Y2T1 843 aa17.34■□□□□ 0.37
TMEM50B-201ENST00000420455 ADAMTS7Q9UKP4 1686 aa17.34■□□□□ 0.37
TMEM50B-201ENST00000420455 BRPF1P55201 1214 aaPredicted RBP17.34■□□□□ 0.37
TMEM50B-201ENST00000420455 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
TMEM50B-201ENST00000420455 ZNF428Q96B54 188 aa17.34■□□□□ 0.37
TMEM50B-201ENST00000420455 COL22A1Q8NFW1 1626 aaPredicted RBP17.33■□□□□ 0.37
TMEM50B-201ENST00000420455 PDE3AQ14432 1141 aa17.33■□□□□ 0.37
TMEM50B-201ENST00000420455 ROBO1Q9Y6N7 1651 aa17.33■□□□□ 0.36
TMEM50B-201ENST00000420455 FAM83GA6ND36 823 aa17.32■□□□□ 0.36
TMEM50B-201ENST00000420455 CRBNQ96SW2 442 aa17.32■□□□□ 0.36
TMEM50B-201ENST00000420455 ERBB3P21860 1342 aa17.32■□□□□ 0.36
TMEM50B-201ENST00000420455 CHL1O00533 1208 aa17.32■□□□□ 0.36
TMEM50B-201ENST00000420455 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
TMEM50B-201ENST00000420455 MBIPQ9NS73 344 aa17.32■□□□□ 0.36
TMEM50B-201ENST00000420455 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms